data_A1DV2 # _chem_comp.id A1DV2 _chem_comp.name "(2R)-3-methyl-2-{[(6P)-6-(2-nitrophenyl)-7H-pyrrolo[2,3-d]pyrimidin-4-yl]amino}butan-1-ol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H19 N5 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-08-24 _chem_comp.pdbx_modified_date 2026-10-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 341.364 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1DV2 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 15EL _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1DV2 C13 C1 C 0 1 Y N N N N N -52.403 -30.242 7.081 5.221 -2.401 -0.205 C13 A1DV2 1 A1DV2 C17 C2 C 0 1 Y N N N N N -46.176 -30.033 5.123 -0.510 0.551 -0.291 C17 A1DV2 2 A1DV2 C16 C3 C 0 1 Y N N N N N -47.567 -30.227 4.802 0.403 -0.578 -0.145 C16 A1DV2 3 A1DV2 C15 C4 C 0 1 Y N N N N N -50.727 -29.392 5.510 4.048 -0.372 0.285 C15 A1DV2 4 A1DV2 C11 C5 C 0 1 Y N N N N N -50.054 -30.746 7.425 2.923 -2.185 -0.844 C11 A1DV2 5 A1DV2 C12 C6 C 0 1 Y N N N N N -51.393 -30.863 7.832 4.083 -2.930 -0.788 C12 A1DV2 6 A1DV2 C1 C7 C 0 1 N N N N N N -41.879 -30.871 0.666 -4.121 -1.185 2.460 C1 A1DV2 7 A1DV2 C10 C8 C 0 1 Y N N N N N -49.699 -30.013 6.271 2.896 -0.900 -0.301 C10 A1DV2 8 A1DV2 C14 C9 C 0 1 Y N N N N N -52.072 -29.514 5.926 5.202 -1.125 0.330 C14 A1DV2 9 A1DV2 C2 C10 C 0 1 N N N N N N -43.193 -30.320 1.247 -4.781 -1.235 1.081 C2 A1DV2 10 A1DV2 C3 C11 C 0 1 N N N N N N -43.091 -28.800 1.453 -6.285 -0.995 1.227 C3 A1DV2 11 A1DV2 C4 C12 C 0 1 N N R N N N -43.646 -31.062 2.535 -4.176 -0.153 0.186 C4 A1DV2 12 A1DV2 C5 C13 C 0 1 N N N N N N -43.882 -32.570 2.335 -4.794 -0.241 -1.211 C5 A1DV2 13 A1DV2 C6 C14 C 0 1 Y N N N N N -44.934 -30.126 4.447 -1.901 0.720 -0.197 C6 A1DV2 14 A1DV2 C7 C15 C 0 1 Y N N N N N -43.879 -29.503 6.420 -1.617 2.961 -0.669 C7 A1DV2 15 A1DV2 C8 C16 C 0 1 Y N N N N N -46.098 -29.652 6.486 0.288 1.673 -0.588 C8 A1DV2 16 A1DV2 C9 C17 C 0 1 Y N N N N N -48.281 -29.964 5.950 1.655 -0.098 -0.352 C9 A1DV2 17 A1DV2 N1 N1 N 0 1 N N N N N N -44.869 -30.498 3.099 -2.727 -0.350 0.092 N1 A1DV2 18 A1DV2 N2 N2 N 0 1 Y N N N N N -43.793 -29.857 5.135 -2.403 1.936 -0.393 N2 A1DV2 19 A1DV2 N3 N3 N 0 1 Y N N N N N -44.965 -29.369 7.179 -0.310 2.849 -0.771 N3 A1DV2 20 A1DV2 N4 N4 N 0 1 Y N N N N N -47.390 -29.619 6.954 1.590 1.253 -0.618 N4 A1DV2 21 A1DV2 N5 N5 N 1 1 N N N N N N -50.436 -28.608 4.302 4.030 0.993 0.858 N5 A1DV2 22 A1DV2 O1 O1 O 0 1 N N N N N N -44.347 -33.162 3.532 -4.610 -1.560 -1.730 O1 A1DV2 23 A1DV2 O2 O2 O 0 1 N N N N N N -49.340 -28.064 4.235 5.003 1.716 0.739 O2 A1DV2 24 A1DV2 O3 O3 O -1 1 N N N N N N -51.309 -28.507 3.446 3.042 1.393 1.448 O3 A1DV2 25 A1DV2 H17 H1 H 0 1 N N N N N N -53.434 -30.324 7.391 6.126 -2.989 -0.163 H17 A1DV2 26 A1DV2 H19 H2 H 0 1 N N N N N N -47.972 -30.522 3.845 0.134 -1.598 0.084 H19 A1DV2 27 A1DV2 H15 H3 H 0 1 N N N N N N -49.280 -31.226 8.006 2.035 -2.599 -1.300 H15 A1DV2 28 A1DV2 H16 H4 H 0 1 N N N N N N -51.644 -31.428 8.718 4.102 -3.928 -1.200 H16 A1DV2 29 A1DV2 H3 H5 H 0 1 N N N N N N -41.968 -31.958 0.524 -4.552 -1.956 3.098 H3 A1DV2 30 A1DV2 H2 H6 H 0 1 N N N N N N -41.677 -30.391 -0.303 -3.050 -1.357 2.357 H2 A1DV2 31 A1DV2 H1 H7 H 0 1 N N N N N N -41.053 -30.658 1.361 -4.291 -0.206 2.909 H1 A1DV2 32 A1DV2 H18 H8 H 0 1 N N N N N N -52.854 -29.042 5.350 6.094 -0.719 0.783 H18 A1DV2 33 A1DV2 H4 H9 H 0 1 N N N N N N -43.974 -30.490 0.491 -4.612 -2.214 0.633 H4 A1DV2 34 A1DV2 H7 H10 H 0 1 N N N N N N -44.037 -28.421 1.868 -6.701 -1.711 1.936 H7 A1DV2 35 A1DV2 H5 H11 H 0 1 N N N N N N -42.270 -28.579 2.151 -6.458 0.018 1.590 H5 A1DV2 36 A1DV2 H6 H12 H 0 1 N N N N N N -42.893 -28.312 0.487 -6.769 -1.120 0.258 H6 A1DV2 37 A1DV2 H8 H13 H 0 1 N N N N N N -42.840 -30.951 3.275 -4.382 0.829 0.613 H8 A1DV2 38 A1DV2 H10 H14 H 0 1 N N N N N N -44.632 -32.717 1.544 -5.860 -0.020 -1.151 H10 A1DV2 39 A1DV2 H9 H15 H 0 1 N N N N N N -42.937 -33.048 2.038 -4.310 0.480 -1.869 H9 A1DV2 40 A1DV2 H13 H16 H 0 1 N N N N N N -42.939 -29.297 6.911 -2.067 3.930 -0.824 H13 A1DV2 41 A1DV2 H12 H17 H 0 1 N N N N N N -45.076 -29.677 2.567 -2.348 -1.232 0.233 H12 A1DV2 42 A1DV2 H14 H18 H 0 1 N N N N N N -47.651 -29.379 7.889 2.355 1.822 -0.800 H14 A1DV2 43 A1DV2 H11 H19 H 0 1 N N N N N N -44.488 -34.091 3.392 -4.979 -1.689 -2.615 H11 A1DV2 44 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1DV2 C1 C2 SING N N 1 A1DV2 C2 C3 SING N N 2 A1DV2 C2 C4 SING N N 3 A1DV2 C5 C4 SING N N 4 A1DV2 C5 O1 SING N N 5 A1DV2 C4 N1 SING N N 6 A1DV2 N1 C6 SING N N 7 A1DV2 O3 N5 SING N N 8 A1DV2 O2 N5 DOUB N N 9 A1DV2 N5 C15 SING N N 10 A1DV2 C6 C17 DOUB Y N 11 A1DV2 C6 N2 SING Y N 12 A1DV2 C16 C17 SING Y N 13 A1DV2 C16 C9 DOUB Y N 14 A1DV2 C17 C8 SING Y N 15 A1DV2 N2 C7 DOUB Y N 16 A1DV2 C15 C14 DOUB Y N 17 A1DV2 C15 C10 SING Y N 18 A1DV2 C14 C13 SING Y N 19 A1DV2 C9 C10 SING N N 20 A1DV2 C9 N4 SING Y N 21 A1DV2 C10 C11 DOUB Y N 22 A1DV2 C7 N3 SING Y N 23 A1DV2 C8 N4 SING Y N 24 A1DV2 C8 N3 DOUB Y N 25 A1DV2 C13 C12 DOUB Y N 26 A1DV2 C11 C12 SING Y N 27 A1DV2 C13 H17 SING N N 28 A1DV2 C16 H19 SING N N 29 A1DV2 C11 H15 SING N N 30 A1DV2 C12 H16 SING N N 31 A1DV2 C1 H3 SING N N 32 A1DV2 C1 H2 SING N N 33 A1DV2 C1 H1 SING N N 34 A1DV2 C14 H18 SING N N 35 A1DV2 C2 H4 SING N N 36 A1DV2 C3 H7 SING N N 37 A1DV2 C3 H5 SING N N 38 A1DV2 C3 H6 SING N N 39 A1DV2 C4 H8 SING N N 40 A1DV2 C5 H10 SING N N 41 A1DV2 C5 H9 SING N N 42 A1DV2 C7 H13 SING N N 43 A1DV2 N1 H12 SING N N 44 A1DV2 N4 H14 SING N N 45 A1DV2 O1 H11 SING N N 46 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1DV2 SMILES ACDLabs 14.52 "CC(C)C(CO)Nc1ncnc2[NH]c(cc21)c1ccccc1[N+]([O-])=O" A1DV2 InChI InChI 1.06 "InChI=1S/C17H19N5O3/c1-10(2)14(8-23)21-17-12-7-13(20-16(12)18-9-19-17)11-5-3-4-6-15(11)22(24)25/h3-7,9-10,14,23H,8H2,1-2H3,(H2,18,19,20,21)/t14-/m0/s1" A1DV2 InChIKey InChI 1.06 UTDSFCFWHMFICQ-AWEZNQCLSA-N A1DV2 SMILES_CANONICAL CACTVS 3.385 "CC(C)[C@H](CO)Nc1ncnc2[nH]c(cc12)c3ccccc3[N+]([O-])=O" A1DV2 SMILES CACTVS 3.385 "CC(C)[CH](CO)Nc1ncnc2[nH]c(cc12)c3ccccc3[N+]([O-])=O" A1DV2 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CC(C)[C@H](CO)Nc1c2cc([nH]c2ncn1)c3ccccc3[N+](=O)[O-]" A1DV2 SMILES "OpenEye OEToolkits" 3.1.0.0 "CC(C)C(CO)Nc1c2cc([nH]c2ncn1)c3ccccc3[N+](=O)[O-]" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1DV2 "SYSTEMATIC NAME" ACDLabs 14.52 "(2R)-3-methyl-2-{[(6P)-6-(2-nitrophenyl)-7H-pyrrolo[2,3-d]pyrimidin-4-yl]amino}butan-1-ol" A1DV2 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(2~{R})-3-methyl-2-[[6-(2-nitrophenyl)-7~{H}-pyrrolo[2,3-d]pyrimidin-4-yl]amino]butan-1-ol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1DV2 "Create component" 2026-08-24 RCSB A1DV2 "Initial release" 2026-11-04 RCSB #