data_A1DVJ # _chem_comp.id A1DVJ _chem_comp.name "2-{[(2R)-1-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)pyrrolidin-2-yl]methyl}-1lambda~6~,2-thiazolidine-1,1-dione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H19 N5 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-08-21 _chem_comp.pdbx_modified_date 2026-10-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 321.398 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1DVJ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 15FV _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1DVJ C13 C1 C 0 1 Y N N N N N -47.937 -29.059 4.542 3.085 0.041 -1.416 C13 A1DVJ 1 A1DVJ C11 C2 C 0 1 Y N N N N N -46.351 -29.176 6.194 2.931 1.297 0.498 C11 A1DVJ 2 A1DVJ C12 C3 C 0 1 Y N N N N N -48.543 -28.935 5.769 4.073 0.951 -1.402 C12 A1DVJ 3 A1DVJ C1 C4 C 0 1 N N N N N N -44.732 -34.064 0.295 -2.390 2.360 -0.873 C1 A1DVJ 4 A1DVJ C10 C5 C 0 1 Y N N N N N -44.137 -29.435 6.042 1.360 1.083 2.166 C10 A1DVJ 5 A1DVJ C14 C6 C 0 1 Y N N N N N -46.527 -29.222 4.796 2.315 0.235 -0.189 C14 A1DVJ 6 A1DVJ C2 C7 C 0 1 N N N N N N -44.570 -33.099 -0.885 -1.105 1.827 -1.571 C2 A1DVJ 7 A1DVJ C3 C8 C 0 1 N N N N N N -43.828 -31.824 -0.441 -1.407 0.341 -1.840 C3 A1DVJ 8 A1DVJ C4 C9 C 0 1 N N N N N N -43.304 -30.660 1.805 -1.899 -1.684 -0.252 C4 A1DVJ 9 A1DVJ C5 C10 C 0 1 N N R N N N -44.066 -29.331 1.918 -0.605 -1.894 0.537 C5 A1DVJ 10 A1DVJ C6 C11 C 0 1 N N N N N N -44.523 -28.766 0.569 -0.391 -3.399 0.802 C6 A1DVJ 11 A1DVJ C7 C12 C 0 1 N N N N N N -45.971 -29.234 0.437 0.581 -3.818 -0.332 C7 A1DVJ 12 A1DVJ C8 C13 C 0 1 N N N N N N -46.503 -29.261 1.868 1.469 -2.556 -0.465 C8 A1DVJ 13 A1DVJ C9 C14 C 0 1 Y N N N N N -45.332 -29.385 4.054 1.187 -0.373 0.384 C9 A1DVJ 14 A1DVJ N1 N1 N 0 1 N N N N N N -43.975 -31.683 1.002 -2.007 -0.277 -0.647 N1 A1DVJ 15 A1DVJ N2 N2 N 0 1 N N N N N N -45.303 -29.437 2.671 0.546 -1.421 -0.253 N2 A1DVJ 16 A1DVJ N3 N3 N 0 1 Y N N N N N -44.148 -29.494 4.708 0.751 0.083 1.554 N3 A1DVJ 17 A1DVJ N4 N4 N 0 1 Y N N N N N -45.179 -29.287 6.857 2.419 1.681 1.667 N4 A1DVJ 18 A1DVJ N5 N5 N 0 1 Y N N N N N -47.581 -29.007 6.763 3.991 1.708 -0.262 N5 A1DVJ 19 A1DVJ O1 O1 O 0 1 N N N N N N -46.123 -32.675 2.106 -2.205 0.997 1.446 O1 A1DVJ 20 A1DVJ O2 O2 O 0 1 N N N N N N -43.836 -33.480 2.784 -4.207 0.586 0.035 O2 A1DVJ 21 A1DVJ S1 S1 S 0 1 N N N N N N -44.751 -32.976 1.753 -2.832 0.920 0.174 S1 A1DVJ 22 A1DVJ H19 H1 H 0 1 N N N N N N -48.422 -29.038 3.577 2.893 -0.689 -2.188 H19 A1DVJ 23 A1DVJ H18 H2 H 0 1 N N N N N N -49.602 -28.802 5.933 4.820 1.068 -2.173 H18 A1DVJ 24 A1DVJ H2 H3 H 0 1 N N N N N N -45.674 -34.626 0.214 -2.172 3.238 -0.264 H2 A1DVJ 25 A1DVJ H1 H4 H 0 1 N N N N N N -43.888 -34.768 0.343 -3.174 2.574 -1.600 H1 A1DVJ 26 A1DVJ H16 H5 H 0 1 N N N N N N -43.170 -29.517 6.515 0.973 1.422 3.115 H16 A1DVJ 27 A1DVJ H3 H6 H 0 1 N N N N N N -45.564 -32.825 -1.267 -0.933 2.357 -2.508 H3 A1DVJ 28 A1DVJ H4 H7 H 0 1 N N N N N N -43.995 -33.594 -1.681 -0.244 1.928 -0.911 H4 A1DVJ 29 A1DVJ H5 H8 H 0 1 N N N N N N -42.762 -31.906 -0.699 -2.101 0.258 -2.677 H5 A1DVJ 30 A1DVJ H6 H9 H 0 1 N N N N N N -44.261 -30.948 -0.946 -0.481 -0.177 -2.088 H6 A1DVJ 31 A1DVJ H8 H10 H 0 1 N N N N N N -43.161 -31.060 2.820 -1.888 -2.311 -1.143 H8 A1DVJ 32 A1DVJ H7 H11 H 0 1 N N N N N N -42.324 -30.455 1.350 -2.753 -1.952 0.371 H7 A1DVJ 33 A1DVJ H9 H12 H 0 1 N N N N N N -43.407 -28.593 2.398 -0.655 -1.352 1.482 H9 A1DVJ 34 A1DVJ H11 H13 H 0 1 N N N N N N -43.908 -29.166 -0.250 0.065 -3.557 1.779 H11 A1DVJ 35 A1DVJ H10 H14 H 0 1 N N N N N N -44.466 -27.667 0.567 -1.333 -3.942 0.726 H10 A1DVJ 36 A1DVJ H12 H15 H 0 1 N N N N N N -46.551 -28.531 -0.179 1.175 -4.684 -0.037 H12 A1DVJ 37 A1DVJ H13 H16 H 0 1 N N N N N N -46.015 -30.237 -0.012 0.040 -4.015 -1.257 H13 A1DVJ 38 A1DVJ H15 H17 H 0 1 N N N N N N -47.009 -28.317 2.118 2.249 -2.558 0.296 H15 A1DVJ 39 A1DVJ H14 H18 H 0 1 N N N N N N -47.200 -30.100 2.013 1.910 -2.506 -1.461 H14 A1DVJ 40 A1DVJ H17 H19 H 0 1 N N N N N N -47.759 -28.945 7.745 4.597 2.428 -0.028 H17 A1DVJ 41 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1DVJ C2 C3 SING N N 1 A1DVJ C2 C1 SING N N 2 A1DVJ C3 N1 SING N N 3 A1DVJ C1 S1 SING N N 4 A1DVJ C7 C6 SING N N 5 A1DVJ C7 C8 SING N N 6 A1DVJ C6 C5 SING N N 7 A1DVJ N1 S1 SING N N 8 A1DVJ N1 C4 SING N N 9 A1DVJ S1 O1 DOUB N N 10 A1DVJ S1 O2 DOUB N N 11 A1DVJ C4 C5 SING N N 12 A1DVJ C8 N2 SING N N 13 A1DVJ C5 N2 SING N N 14 A1DVJ N2 C9 SING N N 15 A1DVJ C9 N3 DOUB Y N 16 A1DVJ C9 C14 SING Y N 17 A1DVJ C13 C14 SING Y N 18 A1DVJ C13 C12 DOUB Y N 19 A1DVJ N3 C10 SING Y N 20 A1DVJ C14 C11 DOUB Y N 21 A1DVJ C12 N5 SING Y N 22 A1DVJ C10 N4 DOUB Y N 23 A1DVJ C11 N5 SING Y N 24 A1DVJ C11 N4 SING Y N 25 A1DVJ C13 H19 SING N N 26 A1DVJ C12 H18 SING N N 27 A1DVJ C1 H2 SING N N 28 A1DVJ C1 H1 SING N N 29 A1DVJ C10 H16 SING N N 30 A1DVJ C2 H3 SING N N 31 A1DVJ C2 H4 SING N N 32 A1DVJ C3 H5 SING N N 33 A1DVJ C3 H6 SING N N 34 A1DVJ C4 H8 SING N N 35 A1DVJ C4 H7 SING N N 36 A1DVJ C5 H9 SING N N 37 A1DVJ C6 H11 SING N N 38 A1DVJ C6 H10 SING N N 39 A1DVJ C7 H12 SING N N 40 A1DVJ C7 H13 SING N N 41 A1DVJ C8 H15 SING N N 42 A1DVJ C8 H14 SING N N 43 A1DVJ N5 H17 SING N N 44 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1DVJ SMILES ACDLabs 14.52 "O=S1(=O)CCCN1CC1CCCN1c1ncnc2[NH]ccc21" A1DVJ InChI InChI 1.06 "InChI=1S/C14H19N5O2S/c20-22(21)8-2-6-18(22)9-11-3-1-7-19(11)14-12-4-5-15-13(12)16-10-17-14/h4-5,10-11H,1-3,6-9H2,(H,15,16,17)/t11-/m1/s1" A1DVJ InChIKey InChI 1.06 NDLHRHRTGIZBFV-LLVKDONJSA-N A1DVJ SMILES_CANONICAL CACTVS 3.385 "O=[S]1(=O)CCCN1C[C@H]2CCCN2c3ncnc4[nH]ccc34" A1DVJ SMILES CACTVS 3.385 "O=[S]1(=O)CCCN1C[CH]2CCCN2c3ncnc4[nH]ccc34" A1DVJ SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1c[nH]c2c1c(ncn2)N3CCC[C@@H]3CN4CCCS4(=O)=O" A1DVJ SMILES "OpenEye OEToolkits" 3.1.0.0 "c1c[nH]c2c1c(ncn2)N3CCCC3CN4CCCS4(=O)=O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1DVJ "SYSTEMATIC NAME" ACDLabs 14.52 "2-{[(2R)-1-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)pyrrolidin-2-yl]methyl}-1lambda~6~,2-thiazolidine-1,1-dione" A1DVJ "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "2-[[(2~{R})-1-(7~{H}-pyrrolo[2,3-d]pyrimidin-4-yl)pyrrolidin-2-yl]methyl]-1,2-thiazolidine 1,1-dioxide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1DVJ "Create component" 2026-08-21 RCSB A1DVJ "Initial release" 2026-11-04 RCSB #