data_A1DW5 # _chem_comp.id A1DW5 _chem_comp.name "methyl 4-[(2R,3S)-2-(hydroxymethyl)-3-methylpiperidin-1-yl]-7H-pyrrolo[2,3-d]pyrimidine-6-carboxylate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H20 N4 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-08-24 _chem_comp.pdbx_modified_date 2026-10-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 304.344 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1DW5 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 15LI _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1DW5 C13 C1 C 0 1 N N N N N N -44.203 -32.270 1.891 -2.643 0.137 -1.534 C13 A1DW5 1 A1DW5 C15 C2 C 0 1 Y N N N N N -46.557 -29.316 5.871 1.373 -1.787 -0.028 C15 A1DW5 2 A1DW5 C11 C3 C 0 1 N N N N N N -41.776 -30.922 0.622 -3.079 2.999 -1.150 C11 A1DW5 3 A1DW5 C12 C4 C 0 1 N N R N N N -43.782 -30.823 2.228 -1.970 0.893 -0.387 C12 A1DW5 4 A1DW5 C1 C5 C 0 1 N N N N N N -51.913 -29.655 6.695 6.045 1.506 -0.071 C1 A1DW5 5 A1DW5 C10 C6 C 0 1 N N S N N N -43.011 -30.135 1.080 -2.857 2.064 0.041 C10 A1DW5 6 A1DW5 C14 C7 C 0 1 Y N N N N N -44.348 -29.459 6.079 -0.423 -3.225 -0.041 C14 A1DW5 7 A1DW5 C2 C8 C 0 1 N N N N N N -50.117 -29.314 5.196 3.721 1.008 0.168 C2 A1DW5 8 A1DW5 C3 C9 C 0 1 Y N N N N N -48.670 -29.324 5.101 2.576 0.091 0.157 C3 A1DW5 9 A1DW5 C4 C10 C 0 1 Y N N N N N -47.880 -29.562 4.008 1.282 0.440 0.400 C4 A1DW5 10 A1DW5 C5 C11 C 0 1 Y N N N N N -46.521 -29.550 4.479 0.499 -0.728 0.294 C5 A1DW5 11 A1DW5 C6 C12 C 0 1 Y N N N N N -45.225 -29.764 3.949 -0.873 -1.013 0.436 C6 A1DW5 12 A1DW5 C7 C13 C 0 1 N N N N N N -45.882 -29.665 1.546 -3.050 -0.582 1.203 C7 A1DW5 13 A1DW5 C8 C14 C 0 1 N N N N N N -45.158 -28.971 0.390 -3.970 0.545 1.679 C8 A1DW5 14 A1DW5 C9 C15 C 0 1 N N N N N N -43.935 -29.758 -0.091 -4.206 1.525 0.527 C9 A1DW5 15 A1DW5 N1 N1 N 0 1 N N N N N N -44.938 -30.000 2.600 -1.774 -0.015 0.750 N1 A1DW5 16 A1DW5 N2 N2 N 0 1 Y N N N N N -44.166 -29.716 4.784 -1.280 -2.266 0.260 N2 A1DW5 17 A1DW5 N3 N3 N 0 1 Y N N N N N -45.504 -29.262 6.712 0.866 -3.007 -0.189 N3 A1DW5 18 A1DW5 N4 N4 N 0 1 Y N N N N N -47.862 -29.176 6.232 2.634 -1.266 -0.110 N4 A1DW5 19 A1DW5 O1 O1 O 0 1 N N N N N N -50.528 -29.411 6.465 4.959 0.543 -0.099 O1 A1DW5 20 A1DW5 O2 O2 O 0 1 N N N N N N -50.871 -29.389 4.229 3.555 2.186 0.417 O2 A1DW5 21 A1DW5 O3 O3 O 0 1 N N N N N N -44.900 -32.855 2.970 -1.757 -0.873 -2.023 O3 A1DW5 22 A1DW5 H16 H1 H 0 1 N N N N N N -44.855 -32.259 1.005 -3.560 -0.329 -1.173 H16 A1DW5 23 A1DW5 H17 H2 H 0 1 N N N N N N -43.304 -32.866 1.677 -2.880 0.832 -2.339 H17 A1DW5 24 A1DW5 H13 H3 H 0 1 N N N N N N -41.152 -31.165 1.494 -3.566 2.451 -1.956 H13 A1DW5 25 A1DW5 H14 H4 H 0 1 N N N N N N -42.096 -31.852 0.129 -3.712 3.833 -0.844 H14 A1DW5 26 A1DW5 H12 H5 H 0 1 N N N N N N -41.195 -30.313 -0.086 -2.119 3.379 -1.497 H12 A1DW5 27 A1DW5 H15 H6 H 0 1 N N N N N N -43.104 -30.873 3.092 -1.004 1.273 -0.720 H15 A1DW5 28 A1DW5 H1 H7 H 0 1 N N N N N N -52.101 -29.710 7.777 5.859 2.285 -0.811 H1 A1DW5 29 A1DW5 H3 H8 H 0 1 N N N N N N -52.506 -28.837 6.261 6.108 1.954 0.920 H3 A1DW5 30 A1DW5 H2 H9 H 0 1 N N N N N N -52.201 -30.607 6.224 6.983 1.002 -0.303 H2 A1DW5 31 A1DW5 H11 H10 H 0 1 N N N N N N -42.635 -29.186 1.491 -2.372 2.612 0.849 H11 A1DW5 32 A1DW5 H19 H11 H 0 1 N N N N N N -43.456 -29.404 6.685 -0.798 -4.229 -0.179 H19 A1DW5 33 A1DW5 H4 H12 H 0 1 N N N N N N -48.212 -29.726 2.993 0.921 1.430 0.637 H4 A1DW5 34 A1DW5 H6 H13 H 0 1 N N N N N N -46.653 -28.991 1.949 -2.869 -1.274 2.026 H6 A1DW5 35 A1DW5 H5 H14 H 0 1 N N N N N N -46.357 -30.586 1.177 -3.524 -1.114 0.379 H5 A1DW5 36 A1DW5 H7 H15 H 0 1 N N N N N N -44.828 -27.977 0.726 -4.923 0.125 2.001 H7 A1DW5 37 A1DW5 H8 H16 H 0 1 N N N N N N -45.859 -28.860 -0.450 -3.502 1.068 2.513 H8 A1DW5 38 A1DW5 H9 H17 H 0 1 N N N N N N -44.275 -30.678 -0.589 -4.825 2.353 0.873 H9 A1DW5 39 A1DW5 H10 H18 H 0 1 N N N N N N -43.372 -29.141 -0.807 -4.709 1.011 -0.292 H10 A1DW5 40 A1DW5 H20 H19 H 0 1 N N N N N N -48.191 -28.996 7.159 3.438 -1.765 -0.322 H20 A1DW5 41 A1DW5 H18 H20 H 0 1 N N N N N N -45.149 -33.743 2.742 -2.119 -1.394 -2.753 H18 A1DW5 42 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1DW5 C9 C8 SING N N 1 A1DW5 C9 C10 SING N N 2 A1DW5 C8 C7 SING N N 3 A1DW5 C11 C10 SING N N 4 A1DW5 C10 C12 SING N N 5 A1DW5 C7 N1 SING N N 6 A1DW5 C13 C12 SING N N 7 A1DW5 C13 O3 SING N N 8 A1DW5 C12 N1 SING N N 9 A1DW5 N1 C6 SING N N 10 A1DW5 C6 C5 DOUB Y N 11 A1DW5 C6 N2 SING Y N 12 A1DW5 C4 C5 SING Y N 13 A1DW5 C4 C3 DOUB Y N 14 A1DW5 O2 C2 DOUB N N 15 A1DW5 C5 C15 SING Y N 16 A1DW5 N2 C14 DOUB Y N 17 A1DW5 C3 C2 SING N N 18 A1DW5 C3 N4 SING Y N 19 A1DW5 C2 O1 SING N N 20 A1DW5 C15 N4 SING Y N 21 A1DW5 C15 N3 DOUB Y N 22 A1DW5 C14 N3 SING Y N 23 A1DW5 O1 C1 SING N N 24 A1DW5 C13 H16 SING N N 25 A1DW5 C13 H17 SING N N 26 A1DW5 C11 H13 SING N N 27 A1DW5 C11 H14 SING N N 28 A1DW5 C11 H12 SING N N 29 A1DW5 C12 H15 SING N N 30 A1DW5 C1 H1 SING N N 31 A1DW5 C1 H3 SING N N 32 A1DW5 C1 H2 SING N N 33 A1DW5 C10 H11 SING N N 34 A1DW5 C14 H19 SING N N 35 A1DW5 C4 H4 SING N N 36 A1DW5 C7 H6 SING N N 37 A1DW5 C7 H5 SING N N 38 A1DW5 C8 H7 SING N N 39 A1DW5 C8 H8 SING N N 40 A1DW5 C9 H9 SING N N 41 A1DW5 C9 H10 SING N N 42 A1DW5 N4 H20 SING N N 43 A1DW5 O3 H18 SING N N 44 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1DW5 SMILES ACDLabs 14.52 "O=C(OC)c1cc2c(ncnc2[NH]1)N1CCCC(C)C1CO" A1DW5 InChI InChI 1.06 "InChI=1S/C15H20N4O3/c1-9-4-3-5-19(12(9)7-20)14-10-6-11(15(21)22-2)18-13(10)16-8-17-14/h6,8-9,12,20H,3-5,7H2,1-2H3,(H,16,17,18)/t9-,12-/m0/s1" A1DW5 InChIKey InChI 1.06 CYYUXOIQTWARHG-CABZTGNLSA-N A1DW5 SMILES_CANONICAL CACTVS 3.385 "COC(=O)c1[nH]c2ncnc(N3CCC[C@H](C)[C@@H]3CO)c2c1" A1DW5 SMILES CACTVS 3.385 "COC(=O)c1[nH]c2ncnc(N3CCC[CH](C)[CH]3CO)c2c1" A1DW5 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "C[C@H]1CCCN([C@H]1CO)c2c3cc([nH]c3ncn2)C(=O)OC" A1DW5 SMILES "OpenEye OEToolkits" 3.1.0.0 "CC1CCCN(C1CO)c2c3cc([nH]c3ncn2)C(=O)OC" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1DW5 "SYSTEMATIC NAME" ACDLabs 14.52 "methyl 4-[(2R,3S)-2-(hydroxymethyl)-3-methylpiperidin-1-yl]-7H-pyrrolo[2,3-d]pyrimidine-6-carboxylate" A1DW5 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "methyl 4-[(2~{R},3~{S})-2-(hydroxymethyl)-3-methyl-piperidin-1-yl]-7~{H}-pyrrolo[2,3-d]pyrimidine-6-carboxylate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1DW5 "Create component" 2026-08-24 RCSB A1DW5 "Initial release" 2026-11-04 RCSB #