data_A1DWE # _chem_comp.id A1DWE _chem_comp.name "(5S)-1-[(5-iodopyrimidin-4-yl)amino]-5-methylpyrrolidin-2-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C9 H11 I N4 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-08-24 _chem_comp.pdbx_modified_date 2026-10-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 318.114 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1DWE _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 15DK _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1DWE C1 C1 C 0 1 N N N N N N -43.263 -28.445 1.613 -2.530 2.175 1.568 C1 A1DWE 1 A1DWE C2 C2 C 0 1 N N S N N N -43.606 -29.903 1.258 -3.098 0.843 1.075 C2 A1DWE 2 A1DWE C3 C3 C 0 1 N N N N N N -42.366 -30.761 0.934 -4.507 1.052 0.478 C3 A1DWE 3 A1DWE C4 C4 C 0 1 N N N N N N -42.568 -32.099 1.669 -4.511 0.031 -0.684 C4 A1DWE 4 A1DWE C5 C5 C 0 1 N N N N N N -43.699 -31.821 2.637 -3.048 -0.150 -1.024 C5 A1DWE 5 A1DWE C6 C6 C 0 1 Y N N N N N -45.247 -29.784 4.440 -0.196 -0.881 0.179 C6 A1DWE 6 A1DWE C7 C7 C 0 1 Y N N N N N -46.437 -29.414 5.107 1.201 -0.907 0.169 C7 A1DWE 7 A1DWE C8 C8 C 0 1 Y N N N N N -46.331 -29.160 6.485 1.836 -2.116 0.379 C8 A1DWE 8 A1DWE C9 C9 C 0 1 Y N N N N N -44.092 -29.612 6.412 -0.212 -3.145 0.586 C9 A1DWE 9 A1DWE I1 I1 I 0 1 N N N N N N -48.287 -29.246 4.136 2.305 0.843 -0.159 I1 A1DWE 10 A1DWE N1 N1 N 0 1 N N N N N N -44.211 -30.616 2.375 -2.280 0.318 -0.024 N1 A1DWE 11 A1DWE N2 N2 N 0 1 N N N N N N -45.288 -30.057 3.068 -0.879 0.306 -0.032 N2 A1DWE 12 A1DWE N3 N3 N 0 1 Y N N N N N -45.153 -29.258 7.136 1.105 -3.203 0.582 N3 A1DWE 13 A1DWE N4 N4 N 0 1 Y N N N N N -44.066 -29.885 5.106 -0.859 -2.014 0.390 N4 A1DWE 14 A1DWE O1 O1 O 0 1 N N N N N N -44.059 -32.603 3.517 -2.629 -0.646 -2.048 O1 A1DWE 15 A1DWE H1 H1 H 0 1 N N N N N N -44.189 -27.893 1.832 -2.504 2.887 0.743 H1 A1DWE 16 A1DWE H3 H2 H 0 1 N N N N N N -42.608 -28.427 2.497 -3.160 2.566 2.366 H3 A1DWE 17 A1DWE H2 H3 H 0 1 N N N N N N -42.746 -27.973 0.764 -1.519 2.021 1.946 H2 A1DWE 18 A1DWE H4 H4 H 0 1 N N N N N N -44.283 -29.911 0.391 -3.136 0.124 1.894 H4 A1DWE 19 A1DWE H6 H5 H 0 1 N N N N N N -42.291 -30.929 -0.151 -5.280 0.813 1.209 H6 A1DWE 20 A1DWE H5 H6 H 0 1 N N N N N N -41.453 -30.263 1.292 -4.626 2.069 0.104 H5 A1DWE 21 A1DWE H7 H7 H 0 1 N N N N N N -42.846 -32.895 0.962 -4.948 -0.914 -0.361 H7 A1DWE 22 A1DWE H8 H8 H 0 1 N N N N N N -41.655 -32.390 2.209 -5.055 0.431 -1.540 H8 A1DWE 23 A1DWE H10 H9 H 0 1 N N N N N N -47.215 -28.879 7.038 2.914 -2.175 0.377 H10 A1DWE 24 A1DWE H11 H10 H 0 1 N N N N N N -43.152 -29.686 6.939 -0.776 -4.050 0.755 H11 A1DWE 25 A1DWE H9 H11 H 0 1 N N N N N N -45.483 -29.185 2.618 -0.388 1.128 -0.185 H9 A1DWE 26 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1DWE C3 C2 SING N N 1 A1DWE C3 C4 SING N N 2 A1DWE C2 C1 SING N N 3 A1DWE C2 N1 SING N N 4 A1DWE C4 C5 SING N N 5 A1DWE N1 C5 SING N N 6 A1DWE N1 N2 SING N N 7 A1DWE C5 O1 DOUB N N 8 A1DWE N2 C6 SING N N 9 A1DWE I1 C7 SING N N 10 A1DWE C6 N4 DOUB Y N 11 A1DWE C6 C7 SING Y N 12 A1DWE N4 C9 SING Y N 13 A1DWE C7 C8 DOUB Y N 14 A1DWE C9 N3 DOUB Y N 15 A1DWE C8 N3 SING Y N 16 A1DWE C1 H1 SING N N 17 A1DWE C1 H3 SING N N 18 A1DWE C1 H2 SING N N 19 A1DWE C2 H4 SING N N 20 A1DWE C3 H6 SING N N 21 A1DWE C3 H5 SING N N 22 A1DWE C4 H7 SING N N 23 A1DWE C4 H8 SING N N 24 A1DWE C8 H10 SING N N 25 A1DWE C9 H11 SING N N 26 A1DWE N2 H9 SING N N 27 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1DWE SMILES ACDLabs 14.52 "Ic1cncnc1NN1C(=O)CCC1C" A1DWE InChI InChI 1.06 "InChI=1S/C9H11IN4O/c1-6-2-3-8(15)14(6)13-9-7(10)4-11-5-12-9/h4-6H,2-3H2,1H3,(H,11,12,13)/t6-/m0/s1" A1DWE InChIKey InChI 1.06 HMCLOCYRIYNWGP-LURJTMIESA-N A1DWE SMILES_CANONICAL CACTVS 3.385 "C[C@H]1CCC(=O)N1Nc2ncncc2I" A1DWE SMILES CACTVS 3.385 "C[CH]1CCC(=O)N1Nc2ncncc2I" A1DWE SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "C[C@H]1CCC(=O)N1Nc2c(cncn2)I" A1DWE SMILES "OpenEye OEToolkits" 3.1.0.0 "CC1CCC(=O)N1Nc2c(cncn2)I" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1DWE "SYSTEMATIC NAME" ACDLabs 14.52 "(5S)-1-[(5-iodopyrimidin-4-yl)amino]-5-methylpyrrolidin-2-one" A1DWE "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(5~{S})-1-[(5-iodanylpyrimidin-4-yl)amino]-5-methyl-pyrrolidin-2-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1DWE "Create component" 2026-08-24 RCSB A1DWE "Initial release" 2026-11-04 RCSB #