data_A1DWN # _chem_comp.id A1DWN _chem_comp.name "(3S,5S)-5-methyl-1-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)piperidin-3-amine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H17 N5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-08-24 _chem_comp.pdbx_modified_date 2026-10-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 231.297 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1DWN _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 15MQ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1DWN C11 C1 C 0 1 Y N N N N N -46.374 -29.129 4.602 -1.677 0.285 0.100 C11 A1DWN 1 A1DWN C12 C2 C 0 1 N N N N N N -43.600 -28.909 2.190 1.715 -1.141 0.147 C12 A1DWN 2 A1DWN C1 C3 C 0 1 N N N N N N -42.284 -30.829 1.259 4.147 -1.683 0.347 C1 A1DWN 3 A1DWN C10 C4 C 0 1 Y N N N N N -47.754 -28.958 4.221 -1.874 1.728 0.219 C10 A1DWN 4 A1DWN C2 C5 C 0 1 N N S N N N -43.071 -29.555 0.909 3.107 -0.563 0.414 C2 A1DWN 5 A1DWN C3 C6 C 0 1 N N N N N N -44.166 -29.840 -0.127 3.426 0.495 -0.647 C3 A1DWN 6 A1DWN C4 C7 C 0 1 N N S N N N -45.323 -30.681 0.440 2.347 1.581 -0.614 C4 A1DWN 7 A1DWN C5 C8 C 0 1 N N N N N N -45.623 -30.407 1.931 0.978 0.940 -0.851 C5 A1DWN 8 A1DWN C6 C9 C 0 1 Y N N N N N -45.118 -29.258 3.953 -0.564 -0.569 0.083 C6 A1DWN 9 A1DWN C7 C10 C 0 1 Y N N N N N -44.111 -29.407 6.044 -1.997 -2.364 -0.141 C7 A1DWN 10 A1DWN C8 C11 C 0 1 Y N N N N N -46.322 -29.162 6.022 -2.962 -0.279 -0.011 C8 A1DWN 11 A1DWN C9 C12 C 0 1 Y N N N N N -48.483 -28.891 5.388 -3.199 1.944 0.175 C9 A1DWN 12 A1DWN N1 N1 N 0 1 N N N N N N -44.973 -29.248 2.557 0.719 -0.063 0.190 N1 A1DWN 13 A1DWN N2 N2 N 0 1 Y N N N N N -44.001 -29.392 4.715 -0.773 -1.877 -0.039 N2 A1DWN 14 A1DWN N3 N3 N 0 1 Y N N N N N -45.210 -29.303 6.789 -3.069 -1.601 -0.134 N3 A1DWN 15 A1DWN N4 N4 N 0 1 Y N N N N N -47.617 -29.021 6.464 -3.860 0.751 0.037 N4 A1DWN 16 A1DWN N5 N5 N 0 1 N N N N N N -46.537 -30.569 -0.393 2.359 2.244 0.696 N5 A1DWN 17 A1DWN H16 H1 H 0 1 N N N N N N -42.944 -29.217 3.018 1.699 -1.612 -0.836 H16 A1DWN 18 A1DWN H15 H2 H 0 1 N N N N N N -43.545 -27.818 2.065 1.479 -1.884 0.909 H15 A1DWN 19 A1DWN H3 H3 H 0 1 N N N N N N -41.509 -30.589 2.002 4.127 -2.139 -0.642 H3 A1DWN 20 A1DWN H1 H4 H 0 1 N N N N N N -42.970 -31.581 1.675 5.138 -1.270 0.537 H1 A1DWN 21 A1DWN H2 H5 H 0 1 N N N N N N -41.809 -31.228 0.350 3.917 -2.437 1.100 H2 A1DWN 22 A1DWN H14 H6 H 0 1 N N N N N N -48.141 -28.895 3.215 -1.103 2.477 0.323 H14 A1DWN 23 A1DWN H4 H7 H 0 1 N N N N N N -42.363 -28.848 0.452 3.127 -0.105 1.403 H4 A1DWN 24 A1DWN H5 H8 H 0 1 N N N N N N -43.717 -30.384 -0.971 4.398 0.940 -0.436 H5 A1DWN 25 A1DWN H6 H9 H 0 1 N N N N N N -44.571 -28.881 -0.483 3.444 0.028 -1.632 H6 A1DWN 26 A1DWN H7 H10 H 0 1 N N N N N N -44.994 -31.729 0.384 2.546 2.314 -1.396 H7 A1DWN 27 A1DWN H9 H11 H 0 1 N N N N N N -46.710 -30.266 2.027 0.206 1.709 -0.814 H9 A1DWN 28 A1DWN H10 H12 H 0 1 N N N N N N -45.318 -31.300 2.497 0.965 0.460 -1.829 H10 A1DWN 29 A1DWN H11 H13 H 0 1 N N N N N N -43.185 -29.518 6.589 -2.122 -3.432 -0.243 H11 A1DWN 30 A1DWN H13 H14 H 0 1 N N N N N N -49.553 -28.759 5.454 -3.673 2.913 0.238 H13 A1DWN 31 A1DWN H12 H15 H 0 1 N N N N N N -47.895 -29.013 7.425 -4.824 0.652 -0.018 H12 A1DWN 32 A1DWN H18 H16 H 0 1 N N N N N N -47.266 -31.126 0.003 1.655 2.966 0.743 H18 A1DWN 33 A1DWN H17 H17 H 0 1 N N N N N N -46.830 -29.613 -0.429 2.240 1.574 1.442 H17 A1DWN 34 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1DWN N5 C4 SING N N 1 A1DWN C3 C4 SING N N 2 A1DWN C3 C2 SING N N 3 A1DWN C4 C5 SING N N 4 A1DWN C2 C1 SING N N 5 A1DWN C2 C12 SING N N 6 A1DWN C5 N1 SING N N 7 A1DWN C12 N1 SING N N 8 A1DWN N1 C6 SING N N 9 A1DWN C6 C11 DOUB Y N 10 A1DWN C6 N2 SING Y N 11 A1DWN C10 C11 SING Y N 12 A1DWN C10 C9 DOUB Y N 13 A1DWN C11 C8 SING Y N 14 A1DWN N2 C7 DOUB Y N 15 A1DWN C9 N4 SING Y N 16 A1DWN C8 N4 SING Y N 17 A1DWN C8 N3 DOUB Y N 18 A1DWN C7 N3 SING Y N 19 A1DWN C12 H16 SING N N 20 A1DWN C12 H15 SING N N 21 A1DWN C1 H3 SING N N 22 A1DWN C1 H1 SING N N 23 A1DWN C1 H2 SING N N 24 A1DWN C10 H14 SING N N 25 A1DWN C2 H4 SING N N 26 A1DWN C3 H5 SING N N 27 A1DWN C3 H6 SING N N 28 A1DWN C4 H7 SING N N 29 A1DWN C5 H9 SING N N 30 A1DWN C5 H10 SING N N 31 A1DWN C7 H11 SING N N 32 A1DWN C9 H13 SING N N 33 A1DWN N4 H12 SING N N 34 A1DWN N5 H18 SING N N 35 A1DWN N5 H17 SING N N 36 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1DWN SMILES ACDLabs 14.52 "CC1CN(CC(N)C1)c1ncnc2[NH]ccc12" A1DWN InChI InChI 1.06 "InChI=1S/C12H17N5/c1-8-4-9(13)6-17(5-8)12-10-2-3-14-11(10)15-7-16-12/h2-3,7-9H,4-6,13H2,1H3,(H,14,15,16)/t8-,9-/m0/s1" A1DWN InChIKey InChI 1.06 QMUAMNPOEYUKKC-IUCAKERBSA-N A1DWN SMILES_CANONICAL CACTVS 3.385 "C[C@H]1C[C@H](N)CN(C1)c2ncnc3[nH]ccc23" A1DWN SMILES CACTVS 3.385 "C[CH]1C[CH](N)CN(C1)c2ncnc3[nH]ccc23" A1DWN SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "C[C@H]1C[C@@H](CN(C1)c2c3cc[nH]c3ncn2)N" A1DWN SMILES "OpenEye OEToolkits" 3.1.0.0 "CC1CC(CN(C1)c2c3cc[nH]c3ncn2)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1DWN "SYSTEMATIC NAME" ACDLabs 14.52 "(3S,5S)-5-methyl-1-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)piperidin-3-amine" A1DWN "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(3~{S},5~{S})-5-methyl-1-(7~{H}-pyrrolo[2,3-d]pyrimidin-4-yl)piperidin-3-amine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1DWN "Create component" 2026-08-24 RCSB A1DWN "Initial release" 2026-11-04 RCSB #