data_A1DX8 # _chem_comp.id A1DX8 _chem_comp.name "N-[(1S,2R)-2-hydroxycyclopentyl]-7H-pyrrolo[2,3-d]pyrimidine-4-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H14 N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-08-25 _chem_comp.pdbx_modified_date 2026-10-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 246.265 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1DX8 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 15GL _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1DX8 C11 C1 C 0 1 Y N N N N N -48.303 -28.850 4.774 2.805 1.712 0.312 C11 A1DX8 1 A1DX8 C12 C2 C 0 1 Y N N N N N -46.880 -29.050 4.933 2.356 0.348 0.058 C12 A1DX8 2 A1DX8 C1 C3 C 0 1 N N N N N N -45.801 -29.085 2.611 -0.147 0.457 0.196 C1 A1DX8 3 A1DX8 C10 C4 C 0 1 Y N N N N N -48.853 -28.816 6.036 4.148 1.699 0.247 C10 A1DX8 4 A1DX8 C2 C5 C 0 1 N N S N N N -44.526 -28.440 0.567 -2.578 0.566 0.330 C2 A1DX8 5 A1DX8 C3 C6 C 0 1 N N N N N N -45.436 -27.305 0.088 -3.053 1.182 -1.002 C3 A1DX8 6 A1DX8 C4 C7 C 0 1 N N N N N N -44.628 -26.040 0.365 -4.596 1.058 -0.948 C4 A1DX8 7 A1DX8 C5 C8 C 0 1 N N N N N N -43.165 -26.436 0.153 -4.805 -0.319 -0.270 C5 A1DX8 8 A1DX8 C6 C9 C 0 1 N N R N N N -43.094 -27.971 0.228 -3.691 -0.388 0.797 C6 A1DX8 9 A1DX8 C7 C10 C 0 1 Y N N N N N -45.721 -29.171 4.109 1.111 -0.295 -0.014 C7 A1DX8 10 A1DX8 C8 C11 C 0 1 Y N N N N N -44.432 -29.405 6.027 2.208 -2.274 -0.465 C8 A1DX8 11 A1DX8 C9 C12 C 0 1 Y N N N N N -46.627 -29.131 6.330 3.527 -0.419 -0.152 C9 A1DX8 12 A1DX8 N1 N1 N 0 1 N N N N N N -44.698 -28.635 2.001 -1.333 -0.179 0.122 N1 A1DX8 13 A1DX8 N2 N2 N 0 1 Y N N N N N -44.510 -29.341 4.694 1.091 -1.601 -0.277 N2 A1DX8 14 A1DX8 N3 N3 N 0 1 Y N N N N N -45.419 -29.316 6.922 3.399 -1.713 -0.407 N3 A1DX8 15 A1DX8 N4 N4 N 0 1 Y N N N N N -47.842 -28.993 6.967 4.591 0.434 -0.029 N4 A1DX8 16 A1DX8 O1 O1 O 0 1 N N N N N N -46.818 -29.389 2.002 -0.110 1.648 0.435 O1 A1DX8 17 A1DX8 O2 O2 O 0 1 N N N N N N -42.161 -28.387 1.209 -3.186 -1.722 0.890 O2 A1DX8 18 A1DX8 H14 H1 H 0 1 N N N N N N -48.835 -28.747 3.840 2.178 2.569 0.510 H14 A1DX8 19 A1DX8 H13 H2 H 0 1 N N N N N N -49.899 -28.675 6.263 4.784 2.561 0.391 H13 A1DX8 20 A1DX8 H2 H3 H 0 1 N N N N N N -44.755 -29.363 0.014 -2.424 1.351 1.071 H2 A1DX8 21 A1DX8 H4 H4 H 0 1 N N N N N N -46.380 -27.297 0.652 -2.757 2.229 -1.065 H4 A1DX8 22 A1DX8 H3 H5 H 0 1 N N N N N N -45.651 -27.404 -0.986 -2.655 0.620 -1.846 H3 A1DX8 23 A1DX8 H6 H6 H 0 1 N N N N N N -44.915 -25.240 -0.333 -5.027 1.856 -0.343 H6 A1DX8 24 A1DX8 H5 H7 H 0 1 N N N N N N -44.788 -25.700 1.399 -5.019 1.065 -1.952 H5 A1DX8 25 A1DX8 H7 H8 H 0 1 N N N N N N -42.536 -25.991 0.938 -5.787 -0.366 0.200 H7 A1DX8 26 A1DX8 H8 H9 H 0 1 N N N N N N -42.820 -26.090 -0.833 -4.689 -1.123 -0.996 H8 A1DX8 27 A1DX8 H9 H10 H 0 1 N N N N N N -42.817 -28.364 -0.761 -4.079 -0.067 1.763 H9 A1DX8 28 A1DX8 H11 H11 H 0 1 N N N N N N -43.441 -29.547 6.433 2.144 -3.332 -0.675 H11 A1DX8 29 A1DX8 H1 H12 H 0 1 N N N N N N -43.918 -28.411 2.585 -1.363 -1.129 -0.068 H1 A1DX8 30 A1DX8 H12 H13 H 0 1 N N N N N N -47.975 -29.017 7.958 5.522 0.179 -0.124 H12 A1DX8 31 A1DX8 H10 H14 H 0 1 N N N N N N -42.133 -29.336 1.238 -3.846 -2.375 1.159 H10 A1DX8 32 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1DX8 C3 C4 SING N N 1 A1DX8 C3 C2 SING N N 2 A1DX8 C5 C6 SING N N 3 A1DX8 C5 C4 SING N N 4 A1DX8 C6 C2 SING N N 5 A1DX8 C6 O2 SING N N 6 A1DX8 C2 N1 SING N N 7 A1DX8 N1 C1 SING N N 8 A1DX8 O1 C1 DOUB N N 9 A1DX8 C1 C7 SING N N 10 A1DX8 C7 N2 DOUB Y N 11 A1DX8 C7 C12 SING Y N 12 A1DX8 N2 C8 SING Y N 13 A1DX8 C11 C12 SING Y N 14 A1DX8 C11 C10 DOUB Y N 15 A1DX8 C12 C9 DOUB Y N 16 A1DX8 C8 N3 DOUB Y N 17 A1DX8 C10 N4 SING Y N 18 A1DX8 C9 N3 SING Y N 19 A1DX8 C9 N4 SING Y N 20 A1DX8 C11 H14 SING N N 21 A1DX8 C10 H13 SING N N 22 A1DX8 C2 H2 SING N N 23 A1DX8 C3 H4 SING N N 24 A1DX8 C3 H3 SING N N 25 A1DX8 C4 H6 SING N N 26 A1DX8 C4 H5 SING N N 27 A1DX8 C5 H7 SING N N 28 A1DX8 C5 H8 SING N N 29 A1DX8 C6 H9 SING N N 30 A1DX8 C8 H11 SING N N 31 A1DX8 N1 H1 SING N N 32 A1DX8 N4 H12 SING N N 33 A1DX8 O2 H10 SING N N 34 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1DX8 SMILES ACDLabs 14.52 "OC1CCCC1NC(=O)c1ncnc2[NH]ccc12" A1DX8 InChI InChI 1.06 "InChI=1S/C12H14N4O2/c17-9-3-1-2-8(9)16-12(18)10-7-4-5-13-11(7)15-6-14-10/h4-6,8-9,17H,1-3H2,(H,16,18)(H,13,14,15)/t8-,9+/m0/s1" A1DX8 InChIKey InChI 1.06 NYVZHZCXERSRHW-DTWKUNHWSA-N A1DX8 SMILES_CANONICAL CACTVS 3.385 "O[C@@H]1CCC[C@@H]1NC(=O)c2ncnc3[nH]ccc23" A1DX8 SMILES CACTVS 3.385 "O[CH]1CCC[CH]1NC(=O)c2ncnc3[nH]ccc23" A1DX8 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1c[nH]c2c1c(ncn2)C(=O)N[C@H]3CCC[C@H]3O" A1DX8 SMILES "OpenEye OEToolkits" 3.1.0.0 "c1c[nH]c2c1c(ncn2)C(=O)NC3CCCC3O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1DX8 "SYSTEMATIC NAME" ACDLabs 14.52 "N-[(1S,2R)-2-hydroxycyclopentyl]-7H-pyrrolo[2,3-d]pyrimidine-4-carboxamide" A1DX8 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "~{N}-[(1~{S},2~{R})-2-oxidanylcyclopentyl]-7~{H}-pyrrolo[2,3-d]pyrimidine-4-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1DX8 "Create component" 2026-08-25 RCSB A1DX8 "Initial release" 2026-11-04 RCSB #