data_A1DXA # _chem_comp.id A1DXA _chem_comp.name "4-[(3R)-3-(difluoromethyl)pyrrolidin-1-yl]-7H-pyrrolo[2,3-d]pyrimidine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C11 H12 F2 N4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-08-24 _chem_comp.pdbx_modified_date 2026-10-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 238.237 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1DXA _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 15MD _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1DXA C11 C1 C 0 1 N N N N N N -46.688 -29.197 1.803 1.409 0.443 0.721 C11 A1DXA 1 A1DXA C1 C2 C 0 1 N N N N N N -47.123 -29.288 -0.736 3.730 0.286 -0.292 C1 A1DXA 2 A1DXA C10 C3 C 0 1 Y N N N N N -46.700 -29.073 4.788 -2.167 -0.304 0.204 C10 A1DXA 3 A1DXA C2 C4 C 0 1 N N R N N N -46.112 -29.046 0.396 2.569 -0.501 0.320 C2 A1DXA 4 A1DXA C3 C5 C 0 1 N N N N N N -44.894 -29.968 0.443 1.887 -1.402 -0.743 C3 A1DXA 5 A1DXA C4 C6 C 0 1 N N N N N N -44.374 -29.798 1.877 0.450 -1.551 -0.202 C4 A1DXA 6 A1DXA C5 C7 C 0 1 Y N N N N N -45.512 -29.246 4.025 -0.908 0.308 0.297 C5 A1DXA 7 A1DXA C6 C8 C 0 1 Y N N N N N -44.316 -29.421 6.015 -1.866 2.289 -0.398 C6 A1DXA 8 A1DXA C7 C9 C 0 1 Y N N N N N -46.518 -29.103 6.195 -3.265 0.471 -0.212 C7 A1DXA 9 A1DXA C8 C10 C 0 1 Y N N N N N -48.724 -28.780 5.768 -3.998 -1.615 0.166 C8 A1DXA 10 A1DXA C9 C11 C 0 1 Y N N N N N -48.105 -28.860 4.542 -2.684 -1.651 0.439 C9 A1DXA 11 A1DXA F1 F1 F 0 1 N N N N N N -46.803 -30.375 -1.434 4.300 1.110 0.684 F1 A1DXA 12 A1DXA F2 F2 F 0 1 N N N N N N -48.369 -29.396 -0.273 4.696 -0.605 -0.772 F2 A1DXA 13 A1DXA N1 N1 N 0 1 N N N N N N -45.488 -29.223 2.622 0.203 -0.411 0.701 N1 A1DXA 14 A1DXA N2 N2 N 0 1 Y N N N N N -44.330 -29.408 4.677 -0.809 1.598 -0.012 N2 A1DXA 15 A1DXA N3 N3 N 0 1 Y N N N N N -45.343 -29.280 6.854 -3.065 1.757 -0.499 N3 A1DXA 16 A1DXA N4 N4 N 0 1 Y N N N N N -47.762 -28.928 6.757 -4.359 -0.350 -0.219 N4 A1DXA 17 A1DXA H12 H1 H 0 1 N N N N N N -47.332 -28.344 2.065 1.574 0.842 1.722 H12 A1DXA 18 A1DXA H11 H2 H 0 1 N N N N N N -47.259 -30.132 1.902 1.312 1.255 0.001 H11 A1DXA 19 A1DXA H1 H3 H 0 1 N N N N N N -47.063 -28.410 -1.396 3.360 0.898 -1.114 H1 A1DXA 20 A1DXA H2 H4 H 0 1 N N N N N N -45.744 -28.014 0.296 2.907 -1.090 1.173 H2 A1DXA 21 A1DXA H4 H5 H 0 1 N N N N N N -45.183 -31.012 0.250 1.883 -0.913 -1.717 H4 A1DXA 22 A1DXA H3 H6 H 0 1 N N N N N N -44.136 -29.656 -0.290 2.380 -2.372 -0.800 H3 A1DXA 23 A1DXA H5 H7 H 0 1 N N N N N N -44.088 -30.772 2.301 -0.261 -1.531 -1.028 H5 A1DXA 24 A1DXA H6 H8 H 0 1 N N N N N N -43.507 -29.121 1.895 0.356 -2.487 0.349 H6 A1DXA 25 A1DXA H7 H9 H 0 1 N N N N N N -43.349 -29.564 6.474 -1.742 3.334 -0.639 H7 A1DXA 26 A1DXA H9 H10 H 0 1 N N N N N N -49.780 -28.628 5.933 -4.672 -2.456 0.245 H9 A1DXA 27 A1DXA H10 H11 H 0 1 N N N N N N -48.582 -28.779 3.576 -2.117 -2.509 0.768 H10 A1DXA 28 A1DXA H8 H12 H 0 1 N N N N N N -47.947 -28.910 7.740 -5.257 -0.078 -0.466 H8 A1DXA 29 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1DXA F1 C1 SING N N 1 A1DXA C1 F2 SING N N 2 A1DXA C1 C2 SING N N 3 A1DXA C2 C3 SING N N 4 A1DXA C2 C11 SING N N 5 A1DXA C3 C4 SING N N 6 A1DXA C11 N1 SING N N 7 A1DXA C4 N1 SING N N 8 A1DXA N1 C5 SING N N 9 A1DXA C5 N2 DOUB Y N 10 A1DXA C5 C10 SING Y N 11 A1DXA C9 C10 SING Y N 12 A1DXA C9 C8 DOUB Y N 13 A1DXA N2 C6 SING Y N 14 A1DXA C10 C7 DOUB Y N 15 A1DXA C8 N4 SING Y N 16 A1DXA C6 N3 DOUB Y N 17 A1DXA C7 N4 SING Y N 18 A1DXA C7 N3 SING Y N 19 A1DXA C11 H12 SING N N 20 A1DXA C11 H11 SING N N 21 A1DXA C1 H1 SING N N 22 A1DXA C2 H2 SING N N 23 A1DXA C3 H4 SING N N 24 A1DXA C3 H3 SING N N 25 A1DXA C4 H5 SING N N 26 A1DXA C4 H6 SING N N 27 A1DXA C6 H7 SING N N 28 A1DXA C8 H9 SING N N 29 A1DXA C9 H10 SING N N 30 A1DXA N4 H8 SING N N 31 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1DXA SMILES ACDLabs 14.52 "FC(F)C1CCN(C1)c1ncnc2[NH]ccc12" A1DXA InChI InChI 1.06 "InChI=1S/C11H12F2N4/c12-9(13)7-2-4-17(5-7)11-8-1-3-14-10(8)15-6-16-11/h1,3,6-7,9H,2,4-5H2,(H,14,15,16)/t7-/m1/s1" A1DXA InChIKey InChI 1.06 BFBPAJQTOMIVFW-SSDOTTSWSA-N A1DXA SMILES_CANONICAL CACTVS 3.385 "FC(F)[C@@H]1CCN(C1)c2ncnc3[nH]ccc23" A1DXA SMILES CACTVS 3.385 "FC(F)[CH]1CCN(C1)c2ncnc3[nH]ccc23" A1DXA SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1c[nH]c2c1c(ncn2)N3CC[C@H](C3)C(F)F" A1DXA SMILES "OpenEye OEToolkits" 3.1.0.0 "c1c[nH]c2c1c(ncn2)N3CCC(C3)C(F)F" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1DXA "SYSTEMATIC NAME" ACDLabs 14.52 "4-[(3R)-3-(difluoromethyl)pyrrolidin-1-yl]-7H-pyrrolo[2,3-d]pyrimidine" A1DXA "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "4-[(3~{R})-3-[bis(fluoranyl)methyl]pyrrolidin-1-yl]-7~{H}-pyrrolo[2,3-d]pyrimidine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1DXA "Create component" 2026-08-24 RCSB A1DXA "Initial release" 2026-11-04 RCSB #