data_A1DXX # _chem_comp.id A1DXX _chem_comp.name "2-[(2S)-1-(9H-pyrimido[4,5-b]indol-4-yl)pyrrolidin-2-yl]propan-2-ol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H20 N4 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-08-25 _chem_comp.pdbx_modified_date 2026-10-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 296.367 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1DXX _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 15CO _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1DXX C13 C1 C 0 1 Y N N N N N -50.554 -28.668 3.835 4.248 2.120 -0.330 C13 A1DXX 1 A1DXX C17 C2 C 0 1 Y N N N N N -46.472 -29.814 4.398 1.123 -0.685 0.006 C17 A1DXX 2 A1DXX C16 C3 C 0 1 Y N N N N N -47.827 -29.504 3.988 2.048 0.453 -0.104 C16 A1DXX 3 A1DXX C15 C4 C 0 1 Y N N N N N -48.553 -29.584 2.784 1.877 1.836 -0.120 C15 A1DXX 4 A1DXX C11 C5 C 0 1 Y N N N N N -48.502 -28.972 5.126 3.336 -0.096 -0.208 C11 A1DXX 5 A1DXX C12 C6 C 0 1 Y N N N N N -49.849 -28.567 5.049 4.432 0.754 -0.315 C12 A1DXX 6 A1DXX C1 C7 C 0 1 N N N N N N -44.257 -29.935 0.009 -2.727 -0.170 -2.168 C1 A1DXX 7 A1DXX C10 C8 C 0 1 Y N N N N N -46.404 -29.463 5.778 1.909 -1.847 -0.039 C10 A1DXX 8 A1DXX C14 C9 C 0 1 Y N N N N N -49.901 -29.177 2.702 2.975 2.661 -0.233 C14 A1DXX 9 A1DXX C2 C10 C 0 1 N N N N N N -43.278 -30.894 0.699 -3.293 0.436 -0.882 C2 A1DXX 10 A1DXX C3 C11 C 0 1 N N N N N N -42.926 -32.041 -0.272 -4.761 0.032 -0.731 C3 A1DXX 11 A1DXX C4 C12 C 0 1 N N S N N N -43.865 -31.427 2.035 -2.496 -0.081 0.318 C4 A1DXX 12 A1DXX C5 C13 C 0 1 N N N N N N -44.108 -32.950 2.031 -3.022 0.567 1.616 C5 A1DXX 13 A1DXX C6 C14 C 0 1 N N N N N N -45.614 -33.096 1.876 -1.727 0.812 2.434 C6 A1DXX 14 A1DXX C7 C15 C 0 1 N N N N N N -46.211 -31.710 2.121 -0.716 1.175 1.319 C7 A1DXX 15 A1DXX C8 C16 C 0 1 Y N N N N N -45.271 -30.356 3.832 -0.265 -0.814 0.133 C8 A1DXX 16 A1DXX C9 C17 C 0 1 Y N N N N N -44.264 -30.093 5.931 -0.009 -3.106 0.162 C9 A1DXX 17 A1DXX N1 N1 N 0 1 N N N N N N -45.131 -30.794 2.489 -1.079 0.303 0.182 N1 A1DXX 18 A1DXX N2 N2 N 0 1 Y N N N N N -44.192 -30.467 4.649 -0.783 -2.038 0.207 N2 A1DXX 19 A1DXX N3 N3 N 0 1 Y N N N N N -45.311 -29.593 6.581 1.299 -3.029 0.042 N3 A1DXX 20 A1DXX N4 N4 N 0 1 Y N N N N N -47.623 -28.959 6.205 3.225 -1.475 -0.167 N4 A1DXX 21 A1DXX O1 O1 O 0 1 N N N N N N -42.076 -30.193 0.935 -3.194 1.860 -0.942 O1 A1DXX 22 A1DXX H18 H1 H 0 1 N N N N N N -51.587 -28.357 3.776 5.103 2.775 -0.414 H18 A1DXX 23 A1DXX H20 H2 H 0 1 N N N N N N -48.065 -29.967 1.900 0.887 2.260 -0.040 H20 A1DXX 24 A1DXX H17 H3 H 0 1 N N N N N N -50.343 -28.177 5.926 5.428 0.343 -0.388 H17 A1DXX 25 A1DXX H3 H4 H 0 1 N N N N N N -44.513 -29.114 0.696 -1.681 0.117 -2.276 H3 A1DXX 26 A1DXX H1 H5 H 0 1 N N N N N N -43.789 -29.523 -0.897 -2.803 -1.256 -2.122 H1 A1DXX 27 A1DXX H2 H6 H 0 1 N N N N N N -45.172 -30.481 -0.267 -3.295 0.198 -3.023 H2 A1DXX 28 A1DXX H19 H7 H 0 1 N N N N N N -50.432 -29.257 1.765 2.843 3.733 -0.245 H19 A1DXX 29 A1DXX H5 H8 H 0 1 N N N N N N -42.224 -32.733 0.216 -4.836 -1.054 -0.685 H5 A1DXX 30 A1DXX H6 H9 H 0 1 N N N N N N -43.843 -32.583 -0.547 -5.164 0.464 0.186 H6 A1DXX 31 A1DXX H4 H10 H 0 1 N N N N N N -42.460 -31.625 -1.177 -5.328 0.400 -1.586 H4 A1DXX 32 A1DXX H8 H11 H 0 1 N N N N N N -43.107 -31.232 2.808 -2.582 -1.165 0.381 H8 A1DXX 33 A1DXX H10 H12 H 0 1 N N N N N N -43.769 -33.400 2.976 -3.525 1.510 1.399 H10 A1DXX 34 A1DXX H9 H13 H 0 1 N N N N N N -43.583 -33.425 1.189 -3.692 -0.113 2.142 H9 A1DXX 35 A1DXX H11 H14 H 0 1 N N N N N N -45.860 -33.442 0.861 -1.856 1.641 3.130 H11 A1DXX 36 A1DXX H12 H15 H 0 1 N N N N N N -46.004 -33.814 2.613 -1.421 -0.093 2.960 H12 A1DXX 37 A1DXX H14 H16 H 0 1 N N N N N N -46.704 -31.352 1.205 -0.818 2.224 1.041 H14 A1DXX 38 A1DXX H13 H17 H 0 1 N N N N N N -46.946 -31.762 2.937 0.302 0.966 1.648 H13 A1DXX 39 A1DXX H15 H18 H 0 1 N N N N N N -43.360 -30.212 6.510 -0.468 -4.082 0.226 H15 A1DXX 40 A1DXX H16 H19 H 0 1 N N N N N N -47.834 -28.641 7.129 3.971 -2.093 -0.221 H16 A1DXX 41 A1DXX H7 H20 H 0 1 N N N N N N -42.241 -29.472 1.531 -2.289 2.188 -1.038 H7 A1DXX 42 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1DXX C3 C2 SING N N 1 A1DXX C1 C2 SING N N 2 A1DXX C2 O1 SING N N 3 A1DXX C2 C4 SING N N 4 A1DXX C6 C5 SING N N 5 A1DXX C6 C7 SING N N 6 A1DXX C5 C4 SING N N 7 A1DXX C4 N1 SING N N 8 A1DXX C7 N1 SING N N 9 A1DXX N1 C8 SING N N 10 A1DXX C14 C15 DOUB Y N 11 A1DXX C14 C13 SING Y N 12 A1DXX C15 C16 SING Y N 13 A1DXX C8 C17 DOUB Y N 14 A1DXX C8 N2 SING Y N 15 A1DXX C13 C12 DOUB Y N 16 A1DXX C16 C17 SING Y N 17 A1DXX C16 C11 DOUB Y N 18 A1DXX C17 C10 SING Y N 19 A1DXX N2 C9 DOUB Y N 20 A1DXX C12 C11 SING Y N 21 A1DXX C11 N4 SING Y N 22 A1DXX C10 N4 SING Y N 23 A1DXX C10 N3 DOUB Y N 24 A1DXX C9 N3 SING Y N 25 A1DXX C13 H18 SING N N 26 A1DXX C15 H20 SING N N 27 A1DXX C12 H17 SING N N 28 A1DXX C1 H3 SING N N 29 A1DXX C1 H1 SING N N 30 A1DXX C1 H2 SING N N 31 A1DXX C14 H19 SING N N 32 A1DXX C3 H5 SING N N 33 A1DXX C3 H6 SING N N 34 A1DXX C3 H4 SING N N 35 A1DXX C4 H8 SING N N 36 A1DXX C5 H10 SING N N 37 A1DXX C5 H9 SING N N 38 A1DXX C6 H11 SING N N 39 A1DXX C6 H12 SING N N 40 A1DXX C7 H14 SING N N 41 A1DXX C7 H13 SING N N 42 A1DXX C9 H15 SING N N 43 A1DXX N4 H16 SING N N 44 A1DXX O1 H7 SING N N 45 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1DXX SMILES ACDLabs 14.52 "CC(C)(O)C1CCCN1c1ncnc2[NH]c3ccccc3c12" A1DXX InChI InChI 1.06 "InChI=1S/C17H20N4O/c1-17(2,22)13-8-5-9-21(13)16-14-11-6-3-4-7-12(11)20-15(14)18-10-19-16/h3-4,6-7,10,13,22H,5,8-9H2,1-2H3,(H,18,19,20)/t13-/m0/s1" A1DXX InChIKey InChI 1.06 MRIZKPSHHBNKAL-ZDUSSCGKSA-N A1DXX SMILES_CANONICAL CACTVS 3.385 "CC(C)(O)[C@@H]1CCCN1c2ncnc3[nH]c4ccccc4c23" A1DXX SMILES CACTVS 3.385 "CC(C)(O)[CH]1CCCN1c2ncnc3[nH]c4ccccc4c23" A1DXX SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CC(C)([C@@H]1CCCN1c2c3c4ccccc4[nH]c3ncn2)O" A1DXX SMILES "OpenEye OEToolkits" 3.1.0.0 "CC(C)(C1CCCN1c2c3c4ccccc4[nH]c3ncn2)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1DXX "SYSTEMATIC NAME" ACDLabs 14.52 "2-[(2S)-1-(9H-pyrimido[4,5-b]indol-4-yl)pyrrolidin-2-yl]propan-2-ol" A1DXX "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "2-[(2~{S})-1-(9~{H}-pyrimido[4,5-b]indol-4-yl)pyrrolidin-2-yl]propan-2-ol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1DXX "Create component" 2026-08-25 RCSB A1DXX "Initial release" 2026-11-04 RCSB #