data_A1DYC # _chem_comp.id A1DYC _chem_comp.name "1-[(5H-pyrrolo[3,2-d]pyrimidin-4-yl)amino]pyrrolidin-2-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C10 H11 N5 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-08-25 _chem_comp.pdbx_modified_date 2026-10-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 217.227 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1DYC _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 15DJ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1DYC C1 C1 C 0 1 N N N N N N -43.593 -31.926 2.425 2.569 -0.141 0.810 C1 A1DYC 1 A1DYC C10 C2 C 0 1 Y N N N N N -46.241 -29.226 4.571 -1.802 0.441 0.001 C10 A1DYC 2 A1DYC C2 C3 C 0 1 N N N N N N -42.382 -32.421 1.658 3.978 -0.432 0.341 C2 A1DYC 3 A1DYC C3 C4 C 0 1 N N N N N N -41.854 -31.171 0.943 4.182 0.520 -0.860 C3 A1DYC 4 A1DYC C4 C5 C 0 1 N N N N N N -42.891 -30.060 1.181 2.728 0.754 -1.327 C4 A1DYC 5 A1DYC C5 C6 C 0 1 Y N N N N N -45.019 -29.669 4.040 -0.470 0.032 -0.122 C5 A1DYC 6 A1DYC C6 C7 C 0 1 Y N N N N N -44.193 -29.651 6.187 -1.192 -2.139 -0.443 C6 A1DYC 7 A1DYC C7 C8 C 0 1 Y N N N N N -46.351 -29.018 5.975 -2.808 -0.535 -0.115 C7 A1DYC 8 A1DYC C8 C9 C 0 1 Y N N N N N -47.692 -28.570 6.238 -4.074 0.171 0.053 C8 A1DYC 9 A1DYC C9 C10 C 0 1 Y N N N N N -48.346 -28.521 5.033 -3.778 1.470 0.250 C9 A1DYC 10 A1DYC N1 N1 N 0 1 N N N N N N -43.827 -30.645 2.128 1.893 0.524 -0.142 N1 A1DYC 11 A1DYC N2 N2 N 0 1 N N N N N N -44.871 -29.887 2.661 0.564 0.949 -0.017 N2 A1DYC 12 A1DYC N3 N3 N 0 1 Y N N N N N -43.984 -29.877 4.886 -0.217 -1.254 -0.341 N3 A1DYC 13 A1DYC N4 N4 N 0 1 Y N N N N N -45.310 -29.228 6.798 -2.460 -1.805 -0.334 N4 A1DYC 14 A1DYC N5 N5 N 0 1 Y N N N N N -47.474 -28.914 4.032 -2.426 1.648 0.217 N5 A1DYC 15 A1DYC O1 O1 O 0 1 N N N N N N -44.238 -32.635 3.193 2.115 -0.464 1.887 O1 A1DYC 16 A1DYC H2 H1 H 0 1 N N N N N N -42.670 -33.194 0.931 4.696 -0.210 1.130 H2 A1DYC 17 A1DYC H1 H2 H 0 1 N N N N N N -41.625 -32.827 2.344 4.067 -1.472 0.026 H1 A1DYC 18 A1DYC H3 H3 H 0 1 N N N N N N -41.747 -31.366 -0.134 4.644 1.454 -0.540 H3 A1DYC 19 A1DYC H4 H4 H 0 1 N N N N N N -40.880 -30.877 1.361 4.771 0.044 -1.644 H4 A1DYC 20 A1DYC H6 H5 H 0 1 N N N N N N -42.414 -29.165 1.606 2.606 1.777 -1.684 H6 A1DYC 21 A1DYC H5 H6 H 0 1 N N N N N N -43.400 -29.794 0.243 2.465 0.045 -2.113 H5 A1DYC 22 A1DYC H8 H7 H 0 1 N N N N N N -43.348 -29.834 6.834 -0.940 -3.174 -0.621 H8 A1DYC 23 A1DYC H9 H8 H 0 1 N N N N N N -48.107 -28.319 7.203 -5.061 -0.265 0.024 H9 A1DYC 24 A1DYC H10 H9 H 0 1 N N N N N N -49.374 -28.224 4.889 -4.503 2.254 0.408 H10 A1DYC 25 A1DYC H7 H10 H 0 1 N N N N N N -44.798 -28.981 2.243 0.367 1.885 0.143 H7 A1DYC 26 A1DYC H11 H11 H 0 1 N N N N N N -47.703 -28.965 3.060 -1.972 2.497 0.334 H11 A1DYC 27 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1DYC C3 C4 SING N N 1 A1DYC C3 C2 SING N N 2 A1DYC C4 N1 SING N N 3 A1DYC C2 C1 SING N N 4 A1DYC N1 C1 SING N N 5 A1DYC N1 N2 SING N N 6 A1DYC C1 O1 DOUB N N 7 A1DYC N2 C5 SING N N 8 A1DYC N5 C10 SING Y N 9 A1DYC N5 C9 SING Y N 10 A1DYC C5 C10 DOUB Y N 11 A1DYC C5 N3 SING Y N 12 A1DYC C10 C7 SING Y N 13 A1DYC N3 C6 DOUB Y N 14 A1DYC C9 C8 DOUB Y N 15 A1DYC C7 C8 SING Y N 16 A1DYC C7 N4 DOUB Y N 17 A1DYC C6 N4 SING Y N 18 A1DYC C2 H2 SING N N 19 A1DYC C2 H1 SING N N 20 A1DYC C3 H3 SING N N 21 A1DYC C3 H4 SING N N 22 A1DYC C4 H6 SING N N 23 A1DYC C4 H5 SING N N 24 A1DYC C6 H8 SING N N 25 A1DYC C8 H9 SING N N 26 A1DYC C9 H10 SING N N 27 A1DYC N2 H7 SING N N 28 A1DYC N5 H11 SING N N 29 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1DYC SMILES ACDLabs 14.52 "O=C1CCCN1Nc1ncnc2cc[NH]c12" A1DYC InChI InChI 1.06 "InChI=1S/C10H11N5O/c16-8-2-1-5-15(8)14-10-9-7(3-4-11-9)12-6-13-10/h3-4,6,11H,1-2,5H2,(H,12,13,14)" A1DYC InChIKey InChI 1.06 WSVHICPSPKGCJR-UHFFFAOYSA-N A1DYC SMILES_CANONICAL CACTVS 3.385 "O=C1CCCN1Nc2ncnc3cc[nH]c23" A1DYC SMILES CACTVS 3.385 "O=C1CCCN1Nc2ncnc3cc[nH]c23" A1DYC SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1c[nH]c2c1ncnc2NN3CCCC3=O" A1DYC SMILES "OpenEye OEToolkits" 3.1.0.0 "c1c[nH]c2c1ncnc2NN3CCCC3=O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1DYC "SYSTEMATIC NAME" ACDLabs 14.52 "1-[(5H-pyrrolo[3,2-d]pyrimidin-4-yl)amino]pyrrolidin-2-one" A1DYC "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "1-(5~{H}-pyrrolo[3,2-d]pyrimidin-4-ylamino)pyrrolidin-2-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1DYC "Create component" 2026-08-25 RCSB A1DYC "Initial release" 2026-11-04 RCSB #