data_A1DYK # _chem_comp.id A1DYK _chem_comp.name "(3S)-3-(2,4-difluorophenyl)-3-[(1H-imidazo[4,5-c]pyridine-7-carbonyl)amino]propanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H12 F2 N4 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-08-25 _chem_comp.pdbx_modified_date 2026-10-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 346.288 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1DYK _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 15NE _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1DYK C13 C1 C 0 1 Y N N N N N -46.291 -32.937 1.144 2.891 -2.030 1.436 C13 A1DYK 1 A1DYK C16 C2 C 0 1 Y N N N N N -44.447 -30.942 0.419 3.303 -0.457 -0.803 C16 A1DYK 2 A1DYK C15 C3 C 0 1 Y N N N N N -44.458 -32.172 -0.264 4.137 -1.533 -0.551 C15 A1DYK 3 A1DYK C11 C4 C 0 1 Y N N N N N -45.353 -30.696 1.469 2.261 -0.172 0.063 C11 A1DYK 4 A1DYK C12 C5 C 0 1 Y N N N N N -46.275 -31.708 1.828 2.059 -0.956 1.184 C12 A1DYK 5 A1DYK C1 C6 C 0 1 N N N N N N -43.657 -30.379 3.792 1.138 3.462 -0.024 C1 A1DYK 6 A1DYK C10 C7 C 0 1 Y N N N N N -48.577 -29.091 5.092 -3.280 -0.706 -0.373 C10 A1DYK 7 A1DYK C14 C8 C 0 1 Y N N N N N -45.382 -33.169 0.100 3.931 -2.319 0.568 C14 A1DYK 8 A1DYK C2 C9 C 0 1 N N N N N N -43.985 -29.153 2.938 1.973 2.271 0.370 C2 A1DYK 9 A1DYK C3 C10 C 0 1 N N S N N N -45.329 -29.356 2.204 1.353 0.999 -0.210 C3 A1DYK 10 A1DYK C4 C11 C 0 1 N N N N N N -47.732 -29.063 2.682 -0.916 0.112 -0.265 C4 A1DYK 11 A1DYK C5 C12 C 0 1 Y N N N N N -48.823 -29.062 3.710 -2.263 -0.031 0.321 C5 A1DYK 12 A1DYK C6 C13 C 0 1 Y N N N N N -50.177 -29.039 3.313 -2.554 0.501 1.576 C6 A1DYK 13 A1DYK C7 C14 C 0 1 Y N N N N N -50.984 -29.086 5.509 -4.743 -0.240 1.487 C7 A1DYK 14 A1DYK C8 C15 C 0 1 Y N N N N N -49.663 -29.099 6.019 -4.549 -0.808 0.228 C8 A1DYK 15 A1DYK C9 C16 C 0 1 Y N N N N N -47.877 -29.138 7.160 -4.653 -1.803 -1.699 C9 A1DYK 16 A1DYK F1 F1 F 0 1 N N N N N N -45.397 -34.355 -0.549 4.745 -3.369 0.815 F1 A1DYK 17 A1DYK F2 F2 F 0 1 N N N N N N -43.559 -29.988 0.065 3.499 0.309 -1.898 F2 A1DYK 18 A1DYK N1 N1 N 0 1 N N N N N N -46.479 -29.295 3.101 0.049 0.762 0.415 N1 A1DYK 19 A1DYK N2 N2 N 0 1 Y N N N N N -51.216 -29.047 4.178 -3.756 0.377 2.105 N2 A1DYK 20 A1DYK N3 N3 N 0 1 Y N N N N N -49.197 -29.127 7.328 -5.339 -1.490 -0.639 N3 A1DYK 21 A1DYK N4 N4 N 0 1 Y N N N N N -47.440 -29.115 5.895 -3.376 -1.340 -1.583 N4 A1DYK 22 A1DYK O1 O1 O 0 1 N N N N N N -44.245 -30.420 4.885 1.543 4.701 0.296 O1 A1DYK 23 A1DYK O2 O2 O 0 1 N N N N N N -47.996 -28.876 1.498 -0.677 -0.357 -1.361 O2 A1DYK 24 A1DYK O3 O3 O 0 1 N N N N N N -42.850 -31.249 3.375 0.104 3.302 -0.628 O3 A1DYK 25 A1DYK H10 H1 H 0 1 N N N N N N -47.002 -33.701 1.422 2.733 -2.641 2.312 H10 A1DYK 26 A1DYK H11 H2 H 0 1 N N N N N N -43.758 -32.351 -1.067 4.948 -1.758 -1.229 H11 A1DYK 27 A1DYK H9 H3 H 0 1 N N N N N N -46.972 -31.535 2.634 1.251 -0.728 1.863 H9 A1DYK 28 A1DYK H1 H4 H 0 1 N N N N N N -43.186 -29.002 2.197 2.984 2.392 -0.019 H1 A1DYK 29 A1DYK H2 H5 H 0 1 N N N N N N -44.056 -28.267 3.586 2.008 2.195 1.457 H2 A1DYK 30 A1DYK H3 H6 H 0 1 N N N N N N -45.424 -28.558 1.453 1.224 1.115 -1.286 H3 A1DYK 31 A1DYK H5 H7 H 0 1 N N N N N N -50.396 -29.014 2.256 -1.783 1.023 2.124 H5 A1DYK 32 A1DYK H6 H8 H 0 1 N N N N N N -51.819 -29.108 6.194 -5.711 -0.309 1.961 H6 A1DYK 33 A1DYK H7 H9 H 0 1 N N N N N N -47.196 -29.164 7.998 -5.038 -2.348 -2.548 H7 A1DYK 34 A1DYK H4 H10 H 0 1 N N N N N N -46.325 -29.433 4.079 -0.120 1.074 1.318 H4 A1DYK 35 A1DYK H8 H12 H 0 1 N N N N N N -46.488 -29.115 5.588 -2.667 -1.442 -2.236 H8 A1DYK 36 A1DYK H13 H13 H 0 1 N N N N N N -43.991 -31.207 5.353 0.974 5.434 0.023 H13 A1DYK 37 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1DYK F1 C14 SING N N 1 A1DYK C15 C14 DOUB Y N 2 A1DYK C15 C16 SING Y N 3 A1DYK F2 C16 SING N N 4 A1DYK C14 C13 SING Y N 5 A1DYK C16 C11 DOUB Y N 6 A1DYK C13 C12 DOUB Y N 7 A1DYK C11 C12 SING Y N 8 A1DYK C11 C3 SING N N 9 A1DYK O2 C4 DOUB N N 10 A1DYK C3 C2 SING N N 11 A1DYK C3 N1 SING N N 12 A1DYK C4 N1 SING N N 13 A1DYK C4 C5 SING N N 14 A1DYK C2 C1 SING N N 15 A1DYK C6 C5 DOUB Y N 16 A1DYK C6 N2 SING Y N 17 A1DYK O3 C1 DOUB N N 18 A1DYK C5 C10 SING Y N 19 A1DYK C1 O1 SING N N 20 A1DYK N2 C7 DOUB Y N 21 A1DYK C10 N4 SING Y N 22 A1DYK C10 C8 DOUB Y N 23 A1DYK C7 C8 SING Y N 24 A1DYK N4 C9 SING Y N 25 A1DYK C8 N3 SING Y N 26 A1DYK C9 N3 DOUB Y N 27 A1DYK C13 H10 SING N N 28 A1DYK C15 H11 SING N N 29 A1DYK C12 H9 SING N N 30 A1DYK C2 H1 SING N N 31 A1DYK C2 H2 SING N N 32 A1DYK C3 H3 SING N N 33 A1DYK C6 H5 SING N N 34 A1DYK C7 H6 SING N N 35 A1DYK C9 H7 SING N N 36 A1DYK N1 H4 SING N N 37 A1DYK N4 H8 SING N N 38 A1DYK O1 H13 SING N N 39 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1DYK SMILES ACDLabs 14.52 "Fc1ccc(c(F)c1)C(CC(=O)O)NC(=O)c1cncc2nc[NH]c12" A1DYK InChI InChI 1.06 "InChI=1S/C16H12F2N4O3/c17-8-1-2-9(11(18)3-8)12(4-14(23)24)22-16(25)10-5-19-6-13-15(10)21-7-20-13/h1-3,5-7,12H,4H2,(H,20,21)(H,22,25)(H,23,24)/t12-/m0/s1" A1DYK InChIKey InChI 1.06 MFTKTIMMWFXJTH-LBPRGKRZSA-N A1DYK SMILES_CANONICAL CACTVS 3.385 "OC(=O)C[C@H](NC(=O)c1cncc2nc[nH]c12)c3ccc(F)cc3F" A1DYK SMILES CACTVS 3.385 "OC(=O)C[CH](NC(=O)c1cncc2nc[nH]c12)c3ccc(F)cc3F" A1DYK SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1cc(c(cc1F)F)[C@H](CC(=O)O)NC(=O)c2cncc3c2[nH]cn3" A1DYK SMILES "OpenEye OEToolkits" 3.1.0.0 "c1cc(c(cc1F)F)C(CC(=O)O)NC(=O)c2cncc3c2[nH]cn3" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1DYK "SYSTEMATIC NAME" ACDLabs 14.52 "(3S)-3-(2,4-difluorophenyl)-3-[(1H-imidazo[4,5-c]pyridine-7-carbonyl)amino]propanoic acid" A1DYK "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(3~{S})-3-[2,4-bis(fluoranyl)phenyl]-3-(1~{H}-imidazo[4,5-c]pyridin-7-ylcarbonylamino)propanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1DYK "Create component" 2026-08-25 RCSB A1DYK "Initial release" 2026-11-04 RCSB #