data_A1DYN # _chem_comp.id A1DYN _chem_comp.name "N-[(5-fluoropyridin-2-yl)methyl]-7H-pyrrolo[2,3-d]pyrimidine-4-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H10 F N5 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-08-25 _chem_comp.pdbx_modified_date 2026-10-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 271.250 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1DYN _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 15NF _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1DYN C13 C1 C 0 1 Y N N N N N -46.903 -29.068 4.911 3.296 0.186 -0.003 C13 A1DYN 1 A1DYN C11 C2 C 0 1 Y N N N N N -48.870 -28.603 5.937 5.329 1.155 -0.041 C11 A1DYN 2 A1DYN C12 C3 C 0 1 Y N N N N N -48.307 -28.799 4.700 4.017 1.453 -0.043 C12 A1DYN 3 A1DYN C1 C4 C 0 1 N N N N N N -45.798 -29.486 2.636 0.870 0.826 -0.016 C1 A1DYN 4 A1DYN C10 C5 C 0 1 Y N N N N N -46.673 -29.008 6.311 4.283 -0.828 0.021 C10 A1DYN 5 A1DYN C2 C6 C 0 1 N N N N N N -44.645 -30.567 0.711 -1.485 1.450 -0.028 C2 A1DYN 6 A1DYN C3 C7 C 0 1 Y N N N N N -45.312 -31.894 0.386 -2.828 0.765 -0.008 C3 A1DYN 7 A1DYN C4 C8 C 0 1 Y N N N N N -46.408 -32.341 1.158 -3.481 0.579 1.195 C4 A1DYN 8 A1DYN C5 C9 C 0 1 Y N N N N N -47.008 -33.569 0.837 -4.715 -0.052 1.204 C5 A1DYN 9 A1DYN C6 C10 C 0 1 Y N N N N N -46.488 -34.300 -0.244 -5.249 -0.476 -0.005 C6 A1DYN 10 A1DYN C7 C11 C 0 1 Y N N N N N -45.391 -33.777 -0.958 -4.535 -0.254 -1.171 C7 A1DYN 11 A1DYN C8 C12 C 0 1 Y N N N N N -45.743 -29.353 4.132 1.945 -0.192 0.009 C8 A1DYN 12 A1DYN C9 C13 C 0 1 Y N N N N N -44.491 -29.458 6.093 2.608 -2.401 0.065 C9 A1DYN 13 A1DYN F1 F1 F 0 1 N N N N N N -47.037 -35.485 -0.587 -6.449 -1.095 -0.045 F1 A1DYN 14 A1DYN N1 N1 N 0 1 N N N N N N -44.817 -30.243 2.116 -0.422 0.443 -0.004 N1 A1DYN 15 A1DYN N2 N2 N 0 1 Y N N N N N -44.807 -32.596 -0.653 -3.366 0.354 -1.140 N2 A1DYN 16 A1DYN N3 N3 N 0 1 Y N N N N N -44.553 -29.554 4.761 1.655 -1.492 0.044 N3 A1DYN 17 A1DYN N4 N4 N 0 1 Y N N N N N -45.485 -29.202 6.945 3.890 -2.093 0.060 N4 A1DYN 18 A1DYN N5 N5 N 0 1 Y N N N N N -47.884 -28.719 6.900 5.501 -0.202 -0.003 N5 A1DYN 19 A1DYN O1 O1 O 0 1 N N N N N N -46.691 -28.970 1.965 1.153 2.008 -0.047 O1 A1DYN 20 A1DYN H9 H1 H 0 1 N N N N N N -49.912 -28.393 6.127 6.129 1.880 -0.067 H9 A1DYN 21 A1DYN H10 H2 H 0 1 N N N N N N -48.817 -28.760 3.749 3.582 2.441 -0.070 H10 A1DYN 22 A1DYN H3 H3 H 0 1 N N N N N N -43.571 -30.636 0.484 -1.397 2.050 -0.934 H3 A1DYN 23 A1DYN H2 H4 H 0 1 N N N N N N -45.099 -29.774 0.098 -1.394 2.096 0.845 H2 A1DYN 24 A1DYN H4 H5 H 0 1 N N N N N N -46.778 -31.748 1.981 -3.035 0.920 2.118 H4 A1DYN 25 A1DYN H5 H6 H 0 1 N N N N N N -47.847 -33.942 1.406 -5.248 -0.212 2.130 H5 A1DYN 26 A1DYN H6 H7 H 0 1 N N N N N N -44.998 -34.346 -1.788 -4.945 -0.576 -2.117 H6 A1DYN 27 A1DYN H7 H8 H 0 1 N N N N N N -43.516 -29.606 6.534 2.327 -3.443 0.097 H7 A1DYN 28 A1DYN H1 H9 H 0 1 N N N N N N -44.144 -30.617 2.755 -0.648 -0.500 0.022 H1 A1DYN 29 A1DYN H8 H10 H 0 1 N N N N N N -48.030 -28.609 7.883 6.359 -0.654 0.006 H8 A1DYN 30 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1DYN C7 N2 DOUB Y N 1 A1DYN C7 C6 SING Y N 2 A1DYN N2 C3 SING Y N 3 A1DYN F1 C6 SING N N 4 A1DYN C6 C5 DOUB Y N 5 A1DYN C3 C2 SING N N 6 A1DYN C3 C4 DOUB Y N 7 A1DYN C2 N1 SING N N 8 A1DYN C5 C4 SING Y N 9 A1DYN O1 C1 DOUB N N 10 A1DYN N1 C1 SING N N 11 A1DYN C1 C8 SING N N 12 A1DYN C8 N3 DOUB Y N 13 A1DYN C8 C13 SING Y N 14 A1DYN C12 C13 SING Y N 15 A1DYN C12 C11 DOUB Y N 16 A1DYN N3 C9 SING Y N 17 A1DYN C13 C10 DOUB Y N 18 A1DYN C11 N5 SING Y N 19 A1DYN C9 N4 DOUB Y N 20 A1DYN C10 N5 SING Y N 21 A1DYN C10 N4 SING Y N 22 A1DYN C11 H9 SING N N 23 A1DYN C12 H10 SING N N 24 A1DYN C2 H3 SING N N 25 A1DYN C2 H2 SING N N 26 A1DYN C4 H4 SING N N 27 A1DYN C5 H5 SING N N 28 A1DYN C7 H6 SING N N 29 A1DYN C9 H7 SING N N 30 A1DYN N1 H1 SING N N 31 A1DYN N5 H8 SING N N 32 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1DYN SMILES ACDLabs 14.52 "Fc1ccc(nc1)CNC(=O)c1ncnc2[NH]ccc12" A1DYN InChI InChI 1.06 "InChI=1S/C13H10FN5O/c14-8-1-2-9(16-5-8)6-17-13(20)11-10-3-4-15-12(10)19-7-18-11/h1-5,7H,6H2,(H,17,20)(H,15,18,19)" A1DYN InChIKey InChI 1.06 WZYHTARYLKIKFH-UHFFFAOYSA-N A1DYN SMILES_CANONICAL CACTVS 3.385 "Fc1ccc(CNC(=O)c2ncnc3[nH]ccc23)nc1" A1DYN SMILES CACTVS 3.385 "Fc1ccc(CNC(=O)c2ncnc3[nH]ccc23)nc1" A1DYN SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1cc(ncc1F)CNC(=O)c2c3cc[nH]c3ncn2" A1DYN SMILES "OpenEye OEToolkits" 3.1.0.0 "c1cc(ncc1F)CNC(=O)c2c3cc[nH]c3ncn2" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1DYN "SYSTEMATIC NAME" ACDLabs 14.52 "N-[(5-fluoropyridin-2-yl)methyl]-7H-pyrrolo[2,3-d]pyrimidine-4-carboxamide" A1DYN "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "~{N}-[(5-fluoranylpyridin-2-yl)methyl]-7~{H}-pyrrolo[2,3-d]pyrimidine-4-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1DYN "Create component" 2026-08-25 RCSB A1DYN "Initial release" 2026-11-04 RCSB #