data_A1EAX # _chem_comp.id A1EAX _chem_comp.name "(2~{S},3~{R},4~{S},5~{R},6~{R})-5-[[(1~{S},4~{R},5~{S},6~{S})-3-(hydroxymethyl)-4,5,6-tris(oxidanyl)cyclohex-2-en-1-yl]amino]-6-methyl-oxane-2,3,4-triol" _chem_comp.type "D-saccharide, alpha linking" _chem_comp.pdbx_type ATOMS _chem_comp.formula "C13 H23 N O8" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-08-16 _chem_comp.pdbx_modified_date 2025-07-25 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 321.324 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1EAX _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9IZE _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBC _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1EAX O5 O5 O 0 1 N N N N N N 30.178 -47.968 24.354 3.245 0.520 -1.284 O5 A1EAX 1 A1EAX C2 C2 C 0 1 N N R N N N 28.950 -47.605 22.324 3.531 -1.010 0.565 C2 A1EAX 2 A1EAX C3 C3 C 0 1 N N S N N N 27.640 -47.482 23.000 2.236 -0.478 1.186 C3 A1EAX 3 A1EAX C2H C2H C 0 1 N N S N N N 25.278 -50.922 25.230 -2.040 1.623 0.048 C2H A1EAX 4 A1EAX C7H C7H C 0 1 N N N N N N 22.564 -47.634 25.868 -3.473 -2.428 -0.081 C7H A1EAX 5 A1EAX C5H C5H C 0 1 N N N N N N 23.870 -48.378 26.137 -2.965 -1.012 -0.177 C5H A1EAX 6 A1EAX C6H C6H C 0 1 N N N N N N 24.990 -48.366 24.990 -1.684 -0.826 -0.185 C6H A1EAX 7 A1EAX C1H C1H C 0 1 N N S N N N 25.972 -49.362 25.278 -1.031 0.522 -0.286 C1H A1EAX 8 A1EAX C4 C4 C 0 1 N N R N N N 27.627 -47.978 24.417 1.308 0.008 0.068 C4 A1EAX 9 A1EAX C5 C5 C 0 1 N N R N N N 28.956 -47.973 25.208 2.034 1.071 -0.761 C5 A1EAX 10 A1EAX C6 C6 C 0 1 N N N N N N 29.119 -49.125 26.151 2.363 2.274 0.126 C6 A1EAX 11 A1EAX C1 C1 C 0 1 N N S N N N 30.031 -47.050 23.227 4.171 0.092 -0.283 C1 A1EAX 12 A1EAX C3H C3H C 0 1 N N S N N N 24.253 -51.030 26.024 -3.315 1.376 -0.767 C3H A1EAX 13 A1EAX C4H C4H C 0 1 N N R N N N 23.874 -49.592 26.927 -3.976 0.094 -0.257 C4H A1EAX 14 A1EAX N4 N4 N 0 1 N N N N N N 27.045 -49.342 24.363 0.094 0.589 0.656 N4 A1EAX 15 A1EAX O7H O7H O 0 1 N N N N N N 22.783 -46.778 24.773 -2.364 -3.328 -0.015 O7H A1EAX 16 A1EAX O2 O2 O 0 1 N N N N N N 28.890 -46.791 21.162 3.236 -2.138 -0.261 O2 A1EAX 17 A1EAX O3 O3 O 0 1 N N N N N N 26.659 -48.199 22.179 2.538 0.609 2.063 O3 A1EAX 18 A1EAX O2H O2H O 0 1 N N N N N N 24.921 -51.165 23.841 -2.347 1.585 1.444 O2H A1EAX 19 A1EAX O3H O3H O 0 1 N N N N N N 24.584 -52.117 26.936 -2.981 1.227 -2.149 O3H A1EAX 20 A1EAX O4H O4H O 0 1 N N N N N N 22.660 -49.717 27.552 -4.525 0.329 1.041 O4H A1EAX 21 A1EAX H2 H2 H 0 1 N N N N N N 29.163 -48.655 22.074 4.219 -1.307 1.356 H2 A1EAX 22 A1EAX H3 H3 H 0 1 N N N N N N 27.363 -46.418 23.015 1.746 -1.274 1.746 H3 A1EAX 23 A1EAX H2H H2H H 0 1 N N N N N N 26.079 -51.619 25.518 -1.621 2.595 -0.212 H2H A1EAX 24 A1EAX H7H H7H H 0 1 N N N N N N 22.277 -47.046 26.753 -4.082 -2.536 0.816 H7H A1EAX 25 A1EAX H7HA H7HA H 0 0 N N N N N N 21.765 -48.352 25.630 -4.075 -2.658 -0.959 H7HA A1EAX 26 A1EAX H6H H6H H 0 1 N N N N N N 25.000 -47.708 24.134 -1.046 -1.694 -0.115 H6H A1EAX 27 A1EAX H1H H1H H 0 1 N N N N N N 26.350 -49.223 26.302 -0.660 0.668 -1.300 H1H A1EAX 28 A1EAX H4 H4 H 0 1 N N N N N N 26.925 -47.343 24.977 1.038 -0.832 -0.572 H4 A1EAX 29 A1EAX H5 H5 H 0 1 N N N N N N 28.967 -47.051 25.808 1.395 1.389 -1.584 H5 A1EAX 30 A1EAX H61 H61 H 0 1 N N N N N N 28.243 -49.184 26.814 2.730 3.092 -0.494 H61 A1EAX 31 A1EAX H62 H62 H 0 1 N N N N N N 29.207 -50.059 25.577 1.464 2.592 0.653 H62 A1EAX 32 A1EAX H63 H63 H 0 1 N N N N N N 30.027 -48.979 26.755 3.128 1.994 0.849 H63 A1EAX 33 A1EAX H1 H1 H 0 1 N N N N N N 30.976 -46.987 22.667 4.433 0.936 0.354 H1 A1EAX 34 A1EAX H3H H3H H 0 1 N N N N N N 23.338 -51.289 25.470 -3.999 2.216 -0.641 H3H A1EAX 35 A1EAX H4H H4H H 0 1 N N N N N N 24.668 -49.510 27.684 -4.776 -0.197 -0.938 H4H A1EAX 36 A1EAX HN4 HN4 H 0 1 N N N N N N 26.714 -49.539 23.440 -0.137 0.138 1.528 HN4 A1EAX 37 A1EAX HO7H HO7H H 0 0 N N N N N N 21.985 -46.299 24.580 -2.617 -4.259 0.049 HO7H A1EAX 38 A1EAX HO2 HO2 H 0 1 N Y N N N N 29.716 -46.842 20.696 4.012 -2.527 -0.688 HO2 A1EAX 39 A1EAX HO3 HO3 H 0 1 N Y N N N N 25.802 -48.140 22.585 3.128 0.374 2.792 HO3 A1EAX 40 A1EAX HO2H HO2H H 0 0 N N N N N N 24.528 -52.026 23.761 -2.982 2.258 1.725 HO2H A1EAX 41 A1EAX HO3H HO3H H 0 0 N N N N N N 23.868 -52.247 27.547 -3.743 1.068 -2.723 HO3H A1EAX 42 A1EAX HO4H HO4H H 0 0 N N N N N N 22.471 -48.924 28.039 -4.971 -0.439 1.425 HO4H A1EAX 43 A1EAX O1 O1 O 0 1 N Y N N N N 29.640 -45.800 23.692 5.351 -0.415 -0.912 O1 A1EAX 44 A1EAX HO1 HO1 H 0 1 N Y N N N N 30.315 -45.447 24.259 5.809 0.231 -1.466 HO1 A1EAX 45 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1EAX O2 C2 SING N N 1 A1EAX O3 C3 SING N N 2 A1EAX C2 C3 SING N N 3 A1EAX C2 C1 SING N N 4 A1EAX C3 C4 SING N N 5 A1EAX C1 O5 SING N N 6 A1EAX O2H C2H SING N N 7 A1EAX O5 C5 SING N N 8 A1EAX N4 C4 SING N N 9 A1EAX N4 C1H SING N N 10 A1EAX C4 C5 SING N N 11 A1EAX O7H C7H SING N N 12 A1EAX C6H C1H SING N N 13 A1EAX C6H C5H DOUB N N 14 A1EAX C5 C6 SING N N 15 A1EAX C2H C1H SING N N 16 A1EAX C2H C3H SING N N 17 A1EAX C7H C5H SING N N 18 A1EAX C3H C4H SING N N 19 A1EAX C3H O3H SING N N 20 A1EAX C5H C4H SING N N 21 A1EAX C4H O4H SING N N 22 A1EAX C2 H2 SING N N 23 A1EAX C3 H3 SING N N 24 A1EAX C2H H2H SING N N 25 A1EAX C7H H7H SING N N 26 A1EAX C7H H7HA SING N N 27 A1EAX C6H H6H SING N N 28 A1EAX C1H H1H SING N N 29 A1EAX C4 H4 SING N N 30 A1EAX C5 H5 SING N N 31 A1EAX C6 H61 SING N N 32 A1EAX C6 H62 SING N N 33 A1EAX C6 H63 SING N N 34 A1EAX C1 H1 SING N N 35 A1EAX C3H H3H SING N N 36 A1EAX C4H H4H SING N N 37 A1EAX N4 HN4 SING N N 38 A1EAX O7H HO7H SING N N 39 A1EAX O2 HO2 SING N N 40 A1EAX O3 HO3 SING N N 41 A1EAX O2H HO2H SING N N 42 A1EAX O3H HO3H SING N N 43 A1EAX O4H HO4H SING N N 44 A1EAX C1 O1 SING N N 45 A1EAX O1 HO1 SING N N 46 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1EAX InChI InChI 1.06 "InChI=1S/C13H23NO8/c1-4-7(10(18)12(20)13(21)22-4)14-6-2-5(3-15)8(16)11(19)9(6)17/h2,4,6-21H,3H2,1H3/t4-,6+,7+,8-,9+,10+,11+,12-,13+/m1/s1" A1EAX InChIKey InChI 1.06 RBZIIHWPZWOIDU-NLVRWMLHSA-N A1EAX SMILES_CANONICAL CACTVS 3.385 "C[C@H]1O[C@H](O)[C@H](O)[C@@H](O)[C@H]1N[C@H]2C=C(CO)[C@@H](O)[C@H](O)[C@H]2O" A1EAX SMILES CACTVS 3.385 "C[CH]1O[CH](O)[CH](O)[CH](O)[CH]1N[CH]2C=C(CO)[CH](O)[CH](O)[CH]2O" A1EAX SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H]1[C@@H]([C@@H]([C@H]([C@H](O1)O)O)O)N[C@H]2C=C([C@H]([C@@H]([C@H]2O)O)O)CO" A1EAX SMILES "OpenEye OEToolkits" 2.0.7 "CC1C(C(C(C(O1)O)O)O)NC2C=C(C(C(C2O)O)O)CO" # _pdbx_chem_comp_identifier.comp_id A1EAX _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S},3~{R},4~{S},5~{R},6~{R})-5-[[(1~{S},4~{R},5~{S},6~{S})-3-(hydroxymethyl)-4,5,6-tris(oxidanyl)cyclohex-2-en-1-yl]amino]-6-methyl-oxane-2,3,4-triol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1EAX "Create component" 2024-08-19 PDBC A1EAX "Initial release" 2025-07-30 RCSB #