data_A1EBE # _chem_comp.id A1EBE _chem_comp.name "ethyl 2-[1-[4-[2-(diethylaminomethylamino)ethanoyl]quinolin-2-yl]azetidin-3-yl]imidazo[1,2-a]pyridine-3-carboxylate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C29 H34 N6 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-09-03 _chem_comp.pdbx_modified_date 2025-06-20 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 514.619 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1EBE _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9JDU _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBC _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1EBE N1 N1 N 0 1 Y N N N N N 46.161 -13.807 -34.109 -4.925 0.874 -0.870 N1 A1EBE 1 A1EBE C2 C1 C 0 1 N N N N N N 44.731 -10.312 -38.765 -8.255 0.340 2.990 C2 A1EBE 2 A1EBE C3 C2 C 0 1 Y N N N N N 45.716 -13.442 -35.386 -4.419 0.036 0.107 C3 A1EBE 3 A1EBE C4 C3 C 0 1 Y N N N N N 46.016 -14.525 -36.190 -3.164 -0.361 -0.328 C4 A1EBE 4 A1EBE C5 C4 C 0 1 Y N N N N N 46.704 -15.080 -34.221 -3.981 0.953 -1.854 C5 A1EBE 5 A1EBE C7 C5 C 0 1 Y N N N N N 46.578 -13.737 -31.791 -6.356 2.314 -2.066 C7 A1EBE 6 A1EBE C9 C6 C 0 1 Y N N N N N 47.203 -15.698 -33.055 -4.228 1.742 -2.991 C9 A1EBE 7 A1EBE C11 C7 C 0 1 N N N N N N 45.319 -16.197 -38.050 -0.870 -0.627 0.756 C11 A1EBE 8 A1EBE C12 C8 C 0 1 N N N N N N 46.962 -14.881 -38.548 -1.421 -2.215 -0.513 C12 A1EBE 9 A1EBE C13 C9 C 0 1 Y N N N N N 46.545 -16.793 -40.202 0.879 -1.680 -0.435 C13 A1EBE 10 A1EBE C16 C10 C 0 1 Y N N N N N 45.466 -20.551 -42.860 3.554 -5.535 0.033 C16 A1EBE 11 A1EBE C17 C11 C 0 1 Y N N N N N 46.002 -19.953 -43.988 4.709 -4.759 0.020 C17 A1EBE 12 A1EBE C18 C12 C 0 1 Y N N N N N 46.562 -18.711 -43.916 4.637 -3.401 -0.095 C18 A1EBE 13 A1EBE C19 C13 C 0 1 Y N N N N N 46.605 -18.004 -42.687 3.388 -2.784 -0.212 C19 A1EBE 14 A1EBE C21 C14 C 0 1 N N N N N N 47.770 -15.948 -43.656 4.447 -0.455 -0.346 C21 A1EBE 15 A1EBE C22 C15 C 0 1 N N N N N N 49.103 -15.267 -43.411 4.290 1.023 -0.593 C22 A1EBE 16 A1EBE C23 C16 C 0 1 N N N N N N 50.430 -15.015 -45.423 5.484 3.128 -0.665 C23 A1EBE 17 A1EBE C24 C17 C 0 1 N N N N N N 50.980 -15.000 -47.841 6.079 3.945 1.536 C24 A1EBE 18 A1EBE C26 C18 C 0 1 N N N N N N 51.624 -13.115 -46.431 4.177 4.885 0.368 C26 A1EBE 19 A1EBE C27 C19 C 0 1 N N N N N N 50.981 -11.776 -46.170 2.838 4.496 -0.261 C27 A1EBE 20 A1EBE C28 C20 C 0 1 Y N N N N N 47.118 -16.109 -41.284 1.978 -0.809 -0.448 C28 A1EBE 21 A1EBE O2 O1 O 0 1 N N N N N N 47.248 -15.852 -44.753 5.548 -0.925 -0.155 O2 A1EBE 22 A1EBE N4 N2 N 0 1 N N N N N N 49.473 -14.411 -44.532 5.609 1.669 -0.553 N4 A1EBE 23 A1EBE N5 N3 N 0 1 N N N N N N 50.664 -14.215 -46.630 4.978 3.675 0.601 N5 A1EBE 24 A1EBE C25 C21 C 0 1 N N N N N N 51.282 -16.458 -47.590 5.507 4.273 2.916 C25 A1EBE 25 A1EBE C20 C22 C 0 1 Y N N N N N 47.154 -16.701 -42.527 3.262 -1.330 -0.337 C20 A1EBE 26 A1EBE C15 C23 C 0 1 Y N N N N N 45.487 -19.909 -41.652 2.322 -4.965 -0.079 C15 A1EBE 27 A1EBE C14 C24 C 0 1 Y N N N N N 46.055 -18.619 -41.538 2.209 -3.569 -0.204 C14 A1EBE 28 A1EBE N3 N4 N 0 1 Y N N N N N 46.036 -18.008 -40.310 1.015 -2.981 -0.316 N3 A1EBE 29 A1EBE N2 N5 N 0 1 N N N N N N 46.463 -16.197 -38.970 -0.397 -1.148 -0.546 N2 A1EBE 30 A1EBE C10 C25 C 0 1 N N N N N N 45.720 -14.761 -37.625 -2.221 -1.277 0.409 C10 A1EBE 31 A1EBE N N6 N 0 1 Y N N N N N 46.631 -15.525 -35.471 -2.934 0.208 -1.500 N A1EBE 32 A1EBE C8 C26 C 0 1 Y N N N N N 47.133 -15.035 -31.867 -5.408 2.417 -3.094 C8 A1EBE 33 A1EBE C6 C27 C 0 1 Y N N N N N 46.102 -13.137 -32.902 -6.099 1.549 -0.980 C6 A1EBE 34 A1EBE C C28 C 0 1 N N N N N N 45.060 -12.130 -35.653 -5.056 -0.341 1.314 C A1EBE 35 A1EBE O O2 O 0 1 N N N N N N 44.493 -11.470 -34.817 -4.493 -1.090 2.091 O A1EBE 36 A1EBE O1 O3 O 0 1 N N N N N N 45.157 -11.779 -36.937 -6.287 0.130 1.603 O1 A1EBE 37 A1EBE C1 C29 C 0 1 N N N N N N 44.442 -10.573 -37.337 -6.870 -0.292 2.838 C1 A1EBE 38 A1EBE H1 H1 H 0 1 N N N N N N 44.200 -9.404 -39.087 -8.162 1.426 2.984 H1 A1EBE 39 A1EBE H2 H2 H 0 1 N N N N N N 45.813 -10.171 -38.900 -8.891 0.025 2.162 H2 A1EBE 40 A1EBE H3 H3 H 0 1 N N N N N N 44.395 -11.167 -39.369 -8.700 0.018 3.932 H3 A1EBE 41 A1EBE H4 H4 H 0 1 N N N N N N 46.535 -13.224 -30.841 -7.293 2.846 -2.142 H4 A1EBE 42 A1EBE H5 H5 H 0 1 N N N N N N 47.636 -16.686 -33.104 -3.489 1.814 -3.776 H5 A1EBE 43 A1EBE H6 H6 H 0 1 N N N N N N 44.338 -16.269 -38.543 -0.373 -1.077 1.615 H6 A1EBE 44 A1EBE H7 H7 H 0 1 N N N N N N 45.381 -16.945 -37.245 -0.907 0.461 0.808 H7 A1EBE 45 A1EBE H8 H8 H 0 1 N N N N N N 47.925 -14.907 -38.016 -1.898 -2.396 -1.476 H8 A1EBE 46 A1EBE H9 H9 H 0 1 N N N N N N 47.007 -14.131 -39.352 -1.088 -3.131 -0.025 H9 A1EBE 47 A1EBE H10 H10 H 0 1 N N N N N N 45.027 -21.535 -42.935 3.636 -6.608 0.129 H10 A1EBE 48 A1EBE H11 H11 H 0 1 N N N N N N 45.977 -20.474 -44.933 5.674 -5.236 0.111 H11 A1EBE 49 A1EBE H12 H12 H 0 1 N N N N N N 46.978 -18.261 -44.805 5.539 -2.807 -0.095 H12 A1EBE 50 A1EBE H13 H13 H 0 1 N N N N N N 49.879 -16.035 -43.275 3.838 1.182 -1.572 H13 A1EBE 51 A1EBE H14 H14 H 0 1 N N N N N N 49.031 -14.654 -42.500 3.650 1.454 0.176 H14 A1EBE 52 A1EBE H15 H15 H 0 1 N N N N N N 50.055 -16.004 -45.724 6.461 3.560 -0.883 H15 A1EBE 53 A1EBE H16 H16 H 0 1 N N N N N N 51.384 -15.132 -44.888 4.791 3.373 -1.470 H16 A1EBE 54 A1EBE H17 H17 H 0 1 N N N N N N 51.859 -14.547 -48.323 6.718 3.065 1.607 H17 A1EBE 55 A1EBE H18 H18 H 0 1 N N N N N N 50.118 -14.941 -48.521 6.664 4.790 1.174 H18 A1EBE 56 A1EBE H19 H19 H 0 1 N N N N N N 52.262 -13.365 -45.571 4.715 5.553 -0.305 H19 A1EBE 57 A1EBE H20 H20 H 0 1 N N N N N N 52.244 -13.030 -47.336 4.000 5.391 1.317 H20 A1EBE 58 A1EBE H21 H21 H 0 1 N N N N N N 51.762 -11.014 -46.033 2.276 5.398 -0.506 H21 A1EBE 59 A1EBE H22 H22 H 0 1 N N N N N N 50.346 -11.501 -47.025 3.016 3.921 -1.169 H22 A1EBE 60 A1EBE H23 H23 H 0 1 N N N N N N 50.365 -11.836 -45.261 2.266 3.893 0.445 H23 A1EBE 61 A1EBE H24 H24 H 0 1 N N N N N N 47.530 -15.121 -41.143 1.828 0.256 -0.543 H24 A1EBE 62 A1EBE H25 H25 H 0 1 N N N N N N 49.867 -13.567 -44.169 6.214 1.301 -1.271 H25 A1EBE 63 A1EBE H28 H28 H 0 1 N N N N N N 51.504 -16.957 -48.545 4.867 5.153 2.844 H28 A1EBE 64 A1EBE H29 H29 H 0 1 N N N N N N 52.152 -16.542 -46.922 4.922 3.427 3.277 H29 A1EBE 65 A1EBE H30 H30 H 0 1 N N N N N N 50.410 -16.937 -47.120 6.323 4.473 3.610 H30 A1EBE 66 A1EBE H31 H31 H 0 1 N N N N N N 45.068 -20.390 -40.781 1.436 -5.582 -0.067 H31 A1EBE 67 A1EBE H32 H32 H 0 1 N N N N N N 45.008 -14.022 -38.022 -2.692 -1.786 1.250 H32 A1EBE 68 A1EBE H33 H33 H 0 1 N N N N N N 47.507 -15.508 -30.971 -5.612 3.026 -3.962 H33 A1EBE 69 A1EBE H34 H34 H 0 1 N N N N N N 45.680 -12.144 -32.848 -6.837 1.471 -0.195 H34 A1EBE 70 A1EBE H35 H35 H 0 1 N N N N N N 44.779 -9.722 -36.728 -6.234 0.023 3.665 H35 A1EBE 71 A1EBE H36 H36 H 0 1 N N N N N N 43.361 -10.718 -37.197 -6.963 -1.378 2.843 H36 A1EBE 72 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1EBE C24 C25 SING N N 1 A1EBE C24 N5 SING N N 2 A1EBE N5 C26 SING N N 3 A1EBE N5 C23 SING N N 4 A1EBE C26 C27 SING N N 5 A1EBE C23 N4 SING N N 6 A1EBE O2 C21 DOUB N N 7 A1EBE N4 C22 SING N N 8 A1EBE C17 C18 DOUB Y N 9 A1EBE C17 C16 SING Y N 10 A1EBE C18 C19 SING Y N 11 A1EBE C21 C22 SING N N 12 A1EBE C21 C20 SING N N 13 A1EBE C16 C15 DOUB Y N 14 A1EBE C19 C20 DOUB Y N 15 A1EBE C19 C14 SING Y N 16 A1EBE C20 C28 SING Y N 17 A1EBE C15 C14 SING Y N 18 A1EBE C14 N3 DOUB Y N 19 A1EBE C28 C13 DOUB Y N 20 A1EBE N3 C13 SING Y N 21 A1EBE C13 N2 SING N N 22 A1EBE N2 C12 SING N N 23 A1EBE N2 C11 SING N N 24 A1EBE C2 C1 SING N N 25 A1EBE C12 C10 SING N N 26 A1EBE C11 C10 SING N N 27 A1EBE C10 C4 SING N N 28 A1EBE C1 O1 SING N N 29 A1EBE O1 C SING N N 30 A1EBE C4 N SING Y N 31 A1EBE C4 C3 DOUB Y N 32 A1EBE C C3 SING N N 33 A1EBE C O DOUB N N 34 A1EBE N C5 DOUB Y N 35 A1EBE C3 N1 SING Y N 36 A1EBE C5 N1 SING Y N 37 A1EBE C5 C9 SING Y N 38 A1EBE N1 C6 SING Y N 39 A1EBE C9 C8 DOUB Y N 40 A1EBE C6 C7 DOUB Y N 41 A1EBE C8 C7 SING Y N 42 A1EBE C2 H1 SING N N 43 A1EBE C2 H2 SING N N 44 A1EBE C2 H3 SING N N 45 A1EBE C7 H4 SING N N 46 A1EBE C9 H5 SING N N 47 A1EBE C11 H6 SING N N 48 A1EBE C11 H7 SING N N 49 A1EBE C12 H8 SING N N 50 A1EBE C12 H9 SING N N 51 A1EBE C16 H10 SING N N 52 A1EBE C17 H11 SING N N 53 A1EBE C18 H12 SING N N 54 A1EBE C22 H13 SING N N 55 A1EBE C22 H14 SING N N 56 A1EBE C23 H15 SING N N 57 A1EBE C23 H16 SING N N 58 A1EBE C24 H17 SING N N 59 A1EBE C24 H18 SING N N 60 A1EBE C26 H19 SING N N 61 A1EBE C26 H20 SING N N 62 A1EBE C27 H21 SING N N 63 A1EBE C27 H22 SING N N 64 A1EBE C27 H23 SING N N 65 A1EBE C28 H24 SING N N 66 A1EBE N4 H25 SING N N 67 A1EBE C25 H28 SING N N 68 A1EBE C25 H29 SING N N 69 A1EBE C25 H30 SING N N 70 A1EBE C15 H31 SING N N 71 A1EBE C10 H32 SING N N 72 A1EBE C8 H33 SING N N 73 A1EBE C6 H34 SING N N 74 A1EBE C1 H35 SING N N 75 A1EBE C1 H36 SING N N 76 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1EBE InChI InChI 1.06 "InChI=1S/C29H34N6O3/c1-4-33(5-2)19-30-16-24(36)22-15-26(31-23-12-8-7-11-21(22)23)34-17-20(18-34)27-28(29(37)38-6-3)35-14-10-9-13-25(35)32-27/h7-15,20,30H,4-6,16-19H2,1-3H3" A1EBE InChIKey InChI 1.06 LHVNJVLZPILOCO-UHFFFAOYSA-N A1EBE SMILES_CANONICAL CACTVS 3.385 "CCOC(=O)c1n2ccccc2nc1C3CN(C3)c4cc(C(=O)CNCN(CC)CC)c5ccccc5n4" A1EBE SMILES CACTVS 3.385 "CCOC(=O)c1n2ccccc2nc1C3CN(C3)c4cc(C(=O)CNCN(CC)CC)c5ccccc5n4" A1EBE SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCN(CC)CNCC(=O)c1cc(nc2c1cccc2)N3CC(C3)c4c(n5ccccc5n4)C(=O)OCC" A1EBE SMILES "OpenEye OEToolkits" 2.0.7 "CCN(CC)CNCC(=O)c1cc(nc2c1cccc2)N3CC(C3)c4c(n5ccccc5n4)C(=O)OCC" # _pdbx_chem_comp_identifier.comp_id A1EBE _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "ethyl 2-[1-[4-[2-(diethylaminomethylamino)ethanoyl]quinolin-2-yl]azetidin-3-yl]imidazo[1,2-a]pyridine-3-carboxylate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1EBE "Create component" 2024-09-03 PDBC A1EBE "Initial release" 2025-06-25 RCSB #