data_A1EBS # _chem_comp.id A1EBS _chem_comp.name "methyl (~{Z})-4-[[4,4-bis(fluoranyl)cyclohexyl]amino]-4-oxidanylidene-but-2-enoate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C11 H15 F2 N O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-09-09 _chem_comp.pdbx_modified_date 2026-03-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 247.239 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1EBS _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9JFH _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBC _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1EBS C10 C1 C 0 1 N N N N N N 8.996 -4.238 27.639 -1.154 -0.572 -0.342 C10 A1EBS 1 A1EBS C11 C2 C 0 1 N N N N N N 9.068 -2.855 27.025 -1.435 0.572 0.634 C11 A1EBS 2 A1EBS C12 C3 C 0 1 N N N N N N 9.229 -1.810 28.124 -2.611 1.404 0.119 C12 A1EBS 3 A1EBS C13 C4 C 0 1 N N N N N N 10.433 -2.146 28.950 -3.852 0.517 0.003 C13 A1EBS 4 A1EBS C14 C5 C 0 1 N N N N N N 10.451 -3.534 29.520 -3.571 -0.628 -0.973 C14 A1EBS 5 A1EBS C15 C6 C 0 1 N N N N N N 10.268 -4.551 28.399 -2.395 -1.460 -0.458 C15 A1EBS 6 A1EBS C2 C7 C 0 1 N N N N N N 9.414 -5.553 25.578 1.237 -0.994 -0.127 C2 A1EBS 7 A1EBS C3 C8 C 0 1 N N N N N N 8.779 -6.561 24.694 2.372 -1.797 0.370 C3 A1EBS 8 A1EBS C5 C9 C 0 1 N N N N N N 7.619 -7.201 24.834 3.629 -1.360 0.197 C5 A1EBS 9 A1EBS C6 C10 C 0 1 N N N N N N 6.556 -7.154 25.855 3.910 0.088 0.164 C6 A1EBS 10 A1EBS C9 C11 C 0 1 N N N N N N 5.828 -6.148 27.864 5.340 1.967 -0.188 C9 A1EBS 11 A1EBS F16 F1 F 0 1 N N N N N N 10.539 -1.233 29.980 -4.927 1.277 -0.468 F16 A1EBS 12 A1EBS F17 F2 F 0 1 N N N N N N 11.572 -1.953 28.190 -4.168 -0.009 1.260 F17 A1EBS 13 A1EBS N1 N1 N 0 1 N N N N N N 8.668 -5.254 26.649 -0.028 -1.369 0.151 N1 A1EBS 14 A1EBS O4 O1 O 0 1 N N N N N N 10.531 -5.062 25.358 1.442 0.006 -0.787 O4 A1EBS 15 A1EBS O7 O2 O 0 1 N N N N N N 5.557 -7.828 25.842 3.035 0.882 0.444 O7 A1EBS 16 A1EBS O8 O3 O 0 1 N N N N N N 6.819 -6.265 26.820 5.137 0.529 -0.177 O8 A1EBS 17 A1EBS H7 H1 H 0 1 N N N N N N 8.180 -4.218 28.377 -0.908 -0.163 -1.322 H7 A1EBS 18 A1EBS H8 H2 H 0 1 N N N N N N 9.929 -2.803 26.342 -1.681 0.162 1.613 H8 A1EBS 19 A1EBS H9 H3 H 0 1 N N N N N N 8.143 -2.656 26.464 -0.551 1.204 0.716 H9 A1EBS 20 A1EBS H10 H4 H 0 1 N N N N N N 9.359 -0.816 27.671 -2.811 2.220 0.814 H10 A1EBS 21 A1EBS H11 H5 H 0 1 N N N N N N 8.334 -1.807 28.763 -2.365 1.814 -0.861 H11 A1EBS 22 A1EBS H12 H6 H 0 1 N N N N N N 11.414 -3.711 30.021 -4.455 -1.260 -1.055 H12 A1EBS 23 A1EBS H13 H7 H 0 1 N N N N N N 9.634 -3.641 30.248 -3.325 -0.218 -1.952 H13 A1EBS 24 A1EBS H14 H8 H 0 1 N N N N N N 10.200 -5.562 28.828 -2.194 -2.276 -1.153 H14 A1EBS 25 A1EBS H15 H9 H 0 1 N N N N N N 11.127 -4.500 27.714 -2.641 -1.870 0.522 H15 A1EBS 26 A1EBS H16 H10 H 0 1 N N N N N N 9.340 -6.813 23.806 2.190 -2.735 0.873 H16 A1EBS 27 A1EBS H17 H12 H 0 1 N N N N N N 7.415 -7.898 24.035 4.436 -2.069 0.082 H17 A1EBS 28 A1EBS H6 H14 H 0 1 N N N N N N 6.152 -5.392 28.595 5.151 2.368 0.808 H6 A1EBS 29 A1EBS H5 H15 H 0 1 N N N N N N 4.867 -5.844 27.424 6.368 2.185 -0.478 H5 A1EBS 30 A1EBS H4 H16 H 0 1 N N N N N N 5.710 -7.119 28.368 4.656 2.425 -0.901 H4 A1EBS 31 A1EBS H1 H17 H 0 1 N N N N N N 7.820 -5.768 26.779 -0.192 -2.167 0.678 H1 A1EBS 32 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1EBS C10 C15 SING N N 1 A1EBS C10 C11 SING N N 2 A1EBS C10 N1 SING N N 3 A1EBS C11 C12 SING N N 4 A1EBS C12 C13 SING N N 5 A1EBS C13 F16 SING N N 6 A1EBS C13 C14 SING N N 7 A1EBS C13 F17 SING N N 8 A1EBS C14 C15 SING N N 9 A1EBS C2 C3 SING N N 10 A1EBS C2 N1 SING N N 11 A1EBS C2 O4 DOUB N N 12 A1EBS C3 C5 DOUB N Z 13 A1EBS C5 C6 SING N N 14 A1EBS C6 O7 DOUB N N 15 A1EBS C6 O8 SING N N 16 A1EBS C9 O8 SING N N 17 A1EBS C10 H7 SING N N 18 A1EBS C11 H8 SING N N 19 A1EBS C11 H9 SING N N 20 A1EBS C12 H10 SING N N 21 A1EBS C12 H11 SING N N 22 A1EBS C14 H12 SING N N 23 A1EBS C14 H13 SING N N 24 A1EBS C15 H14 SING N N 25 A1EBS C15 H15 SING N N 26 A1EBS C3 H16 SING N N 27 A1EBS C5 H17 SING N N 28 A1EBS C9 H6 SING N N 29 A1EBS C9 H5 SING N N 30 A1EBS C9 H4 SING N N 31 A1EBS N1 H1 SING N N 32 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1EBS InChI InChI 1.06 "InChI=1S/C11H15F2NO3/c1-17-10(16)3-2-9(15)14-8-4-6-11(12,13)7-5-8/h2-3,8H,4-7H2,1H3,(H,14,15)/b3-2-" A1EBS InChIKey InChI 1.06 SXVXXBDPAMYDMT-IHWYPQMZSA-N A1EBS SMILES_CANONICAL CACTVS 3.385 "COC(=O)\C=C/C(=O)NC1CCC(F)(F)CC1" A1EBS SMILES CACTVS 3.385 "COC(=O)C=CC(=O)NC1CCC(F)(F)CC1" A1EBS SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COC(=O)/C=C\C(=O)NC1CCC(CC1)(F)F" A1EBS SMILES "OpenEye OEToolkits" 2.0.7 "COC(=O)C=CC(=O)NC1CCC(CC1)(F)F" # _pdbx_chem_comp_identifier.comp_id A1EBS _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "methyl (~{Z})-4-[[4,4-bis(fluoranyl)cyclohexyl]amino]-4-oxidanylidene-but-2-enoate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1EBS "Create component" 2024-09-09 PDBC A1EBS "Modify PCM" 2024-09-27 PDBE A1EBS "Initial release" 2026-03-11 RCSB # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id A1EBS _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C3 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #