data_A1EDN # _chem_comp.id A1EDN _chem_comp.name "(5~{S})-1-(3-chloranyl-4-methoxy-phenyl)-5-[4-(3-methyl-1,2-benzoxazol-5-yl)-1-[(2~{R})-2-morpholin-4-ylpropyl]imidazol-2-yl]pyrrolidin-2-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C29 H32 Cl N5 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-10-14 _chem_comp.pdbx_modified_date 2025-03-07 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 550.048 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1EDN _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9JUU _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBC _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1EDN CAS C1 C 0 1 N N N N N N 7.165 4.013 0.805 6.178 1.968 -0.316 CAS A1EDN 1 A1EDN CAT C2 C 0 1 N N N N N N 5.819 3.332 0.542 7.579 1.786 0.274 CAT A1EDN 2 A1EDN OAU O1 O 0 1 N N N N N N 4.841 4.287 1.082 7.833 0.392 0.463 OAU A1EDN 3 A1EDN CAV C3 C 0 1 N N N N N N 4.962 4.625 2.502 6.892 -0.254 1.324 CAV A1EDN 4 A1EDN CAW C4 C 0 1 N N N N N N 6.390 5.130 2.760 5.484 -0.093 0.745 CAW A1EDN 5 A1EDN NAR N1 N 0 1 N N N N N N 7.269 4.127 2.233 5.191 1.338 0.574 NAR A1EDN 6 A1EDN CAQ C5 C 0 1 N N R N N N 8.657 4.524 2.673 3.826 1.539 0.072 CAQ A1EDN 7 A1EDN CAX C6 C 0 1 N N N N N N 9.349 5.634 1.853 3.507 3.036 0.047 CAX A1EDN 8 A1EDN CAP C7 C 0 1 N N N N N N 9.486 3.294 2.620 2.834 0.822 0.990 CAP A1EDN 9 A1EDN NAM N2 N 0 1 Y N N N N N 10.860 3.372 3.300 1.473 1.008 0.479 NAM A1EDN 10 A1EDN CAL C8 C 0 1 Y N N N N N 11.024 3.401 4.648 0.569 1.941 0.906 CAL A1EDN 11 A1EDN CAK C9 C 0 1 Y N N N N N 12.344 3.394 4.900 -0.556 1.760 0.167 CAK A1EDN 12 A1EDN CAF C10 C 0 1 Y N N N N N 12.931 3.370 6.136 -1.811 2.545 0.276 CAF A1EDN 13 A1EDN CAA C11 C 0 1 Y N N N N N 12.357 3.928 7.281 -2.924 2.180 -0.468 CAA A1EDN 14 A1EDN CAB C12 C 0 1 Y N N N N N 13.012 3.822 8.462 -4.099 2.924 -0.359 CAB A1EDN 15 A1EDN CAI C13 C 0 1 Y N N N N N 12.739 4.249 9.663 -5.423 2.819 -0.982 CAI A1EDN 16 A1EDN CAJ C14 C 0 1 N N N N N N 11.497 5.050 9.959 -5.858 1.781 -1.983 CAJ A1EDN 17 A1EDN NAH N3 N 0 1 Y N N N N N 13.686 3.880 10.566 -6.149 3.786 -0.512 NAH A1EDN 18 A1EDN OAG O2 O 0 1 Y N N N N N 14.513 3.279 10.039 -5.393 4.552 0.404 OAG A1EDN 19 A1EDN CAC C15 C 0 1 Y N N N N N 14.166 3.188 8.591 -4.151 4.034 0.501 CAC A1EDN 20 A1EDN CAD C16 C 0 1 Y N N N N N 14.743 2.607 7.550 -3.027 4.387 1.239 CAD A1EDN 21 A1EDN CAE C17 C 0 1 Y N N N N N 14.145 2.686 6.289 -1.872 3.648 1.133 CAE A1EDN 22 A1EDN NAO N4 N 0 1 Y N N N N N 13.014 3.286 3.729 -0.328 0.739 -0.684 NAO A1EDN 23 A1EDN CAN C18 C 0 1 Y N N N N N 12.092 3.296 2.766 0.883 0.293 -0.503 CAN A1EDN 24 A1EDN CAY C19 C 0 1 N N S N N N 12.398 3.200 1.376 1.521 -0.840 -1.265 CAY A1EDN 25 A1EDN CAZ C20 C 0 1 N N N N N N 12.858 1.784 1.064 1.857 -0.394 -2.705 CAZ A1EDN 26 A1EDN CBA C21 C 0 1 N N N N N N 14.283 1.991 0.582 1.587 -1.688 -3.507 CBA A1EDN 27 A1EDN CBB C22 C 0 1 N N N N N N 14.498 3.351 0.472 0.594 -2.450 -2.659 CBB A1EDN 28 A1EDN OBD O3 O 0 1 N N N N N N 15.534 3.840 0.038 -0.085 -3.377 -3.048 OBD A1EDN 29 A1EDN NBC N5 N 0 1 N N N N N N 13.495 4.081 0.944 0.574 -1.952 -1.409 NBC A1EDN 30 A1EDN CBE C23 C 0 1 Y N N N N N 13.390 5.410 0.986 -0.246 -2.432 -0.380 CBE A1EDN 31 A1EDN CBJ C24 C 0 1 Y N N N N N 13.951 6.138 2.034 -1.199 -3.405 -0.648 CBJ A1EDN 32 A1EDN CBI C25 C 0 1 Y N N N N N 13.805 7.515 2.061 -2.008 -3.878 0.368 CBI A1EDN 33 A1EDN CLBM CL1 CL 0 0 N N N N N N 14.533 8.489 3.371 -3.200 -5.095 0.033 CLBM A1EDN 34 A1EDN CBH C26 C 0 1 Y N N N N N 13.124 8.179 1.053 -1.866 -3.381 1.656 CBH A1EDN 35 A1EDN OBK O4 O 0 1 N N N N N N 13.083 9.527 1.204 -2.662 -3.847 2.656 OBK A1EDN 36 A1EDN CBL C27 C 0 1 N N N N N N 12.247 10.323 0.350 -2.461 -3.291 3.957 CBL A1EDN 37 A1EDN CBG C28 C 0 1 Y N N N N N 12.552 7.448 0.010 -0.914 -2.409 1.924 CBG A1EDN 38 A1EDN CBF C29 C 0 1 Y N N N N N 12.697 6.078 -0.015 -0.102 -1.940 0.911 CBF A1EDN 39 A1EDN H1 H1 H 0 1 N N N N N N 7.989 3.401 0.408 5.957 3.032 -0.408 H1 A1EDN 40 A1EDN H2 H2 H 0 1 N N N N N N 7.189 5.009 0.338 6.133 1.500 -1.299 H2 A1EDN 41 A1EDN H3 H3 H 0 1 N N N N N N 5.662 3.175 -0.535 8.319 2.202 -0.410 H3 A1EDN 42 A1EDN H4 H4 H 0 1 N N N N N N 5.757 2.367 1.066 7.639 2.300 1.233 H4 A1EDN 43 A1EDN H5 H5 H 0 1 N N N N N N 4.237 5.412 2.760 7.135 -1.314 1.400 H5 A1EDN 44 A1EDN H6 H6 H 0 1 N N N N N N 4.767 3.732 3.114 6.933 0.201 2.314 H6 A1EDN 45 A1EDN H7 H7 H 0 1 N N N N N N 6.560 5.258 3.839 5.428 -0.594 -0.221 H7 A1EDN 46 A1EDN H8 H8 H 0 1 N N N N N N 6.554 6.089 2.247 4.757 -0.534 1.427 H8 A1EDN 47 A1EDN H10 H10 H 0 1 N N N N N N 8.602 4.863 3.718 3.746 1.134 -0.937 H10 A1EDN 48 A1EDN H11 H11 H 0 1 N N N N N N 10.347 5.831 2.271 4.214 3.546 -0.608 H11 A1EDN 49 A1EDN H12 H12 H 0 1 N N N N N N 9.447 5.310 0.806 2.493 3.185 -0.326 H12 A1EDN 50 A1EDN H13 H13 H 0 1 N N N N N N 8.746 6.553 1.897 3.587 3.441 1.055 H13 A1EDN 51 A1EDN H14 H14 H 0 1 N N N N N N 8.918 2.486 3.103 3.069 -0.242 1.018 H14 A1EDN 52 A1EDN H15 H15 H 0 1 N N N N N N 9.649 3.045 1.561 2.905 1.237 1.995 H15 A1EDN 53 A1EDN H16 H16 H 0 1 N N N N N N 10.235 3.425 5.385 0.720 2.678 1.681 H16 A1EDN 54 A1EDN H17 H17 H 0 1 N N N N N N 11.406 4.436 7.225 -2.880 1.326 -1.128 H17 A1EDN 55 A1EDN H18 H18 H 0 1 N N N N N N 11.466 5.298 11.030 -6.276 0.922 -1.457 H18 A1EDN 56 A1EDN H19 H19 H 0 1 N N N N N N 11.510 5.978 9.369 -6.615 2.207 -2.642 H19 A1EDN 57 A1EDN H20 H20 H 0 1 N N N N N N 10.608 4.459 9.694 -4.999 1.462 -2.573 H20 A1EDN 58 A1EDN H21 H21 H 0 1 N N N N N N 15.674 2.073 7.675 -3.063 5.240 1.901 H21 A1EDN 59 A1EDN H22 H22 H 0 1 N N N N N N 14.617 2.222 5.436 -1.003 3.925 1.713 H22 A1EDN 60 A1EDN H23 H23 H 0 1 N N N N N N 11.500 3.418 0.779 2.424 -1.177 -0.754 H23 A1EDN 61 A1EDN H24 H24 H 0 1 N N N N N N 12.236 1.330 0.279 1.197 0.411 -3.028 H24 A1EDN 62 A1EDN H25 H25 H 0 1 N N N N N N 14.420 1.510 -0.398 1.156 -1.450 -4.480 H25 A1EDN 63 A1EDN H26 H26 H 0 1 N N N N N N 14.495 5.633 2.818 -1.310 -3.791 -1.651 H26 A1EDN 64 A1EDN H27 H27 H 0 1 N N N N N N 12.347 11.384 0.623 -1.439 -3.485 4.281 H27 A1EDN 65 A1EDN H28 H28 H 0 1 N N N N N N 12.554 10.183 -0.697 -2.634 -2.216 3.923 H28 A1EDN 66 A1EDN H29 H29 H 0 1 N N N N N N 11.199 10.011 0.469 -3.158 -3.749 4.659 H29 A1EDN 67 A1EDN H30 H30 H 0 1 N N N N N N 12.001 7.952 -0.770 -0.804 -2.023 2.927 H30 A1EDN 68 A1EDN H31 H31 H 0 1 N N N N N N 12.264 5.514 -0.828 0.640 -1.183 1.120 H31 A1EDN 69 A1EDN H9 H9 H 0 1 N N N N N N 12.832 1.152 1.964 2.902 -0.094 -2.787 H9 A1EDN 70 A1EDN H32 H32 H 0 1 N N N N N N 14.989 1.558 1.305 2.507 -2.260 -3.629 H32 A1EDN 71 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1EDN CBF CBG DOUB Y N 1 A1EDN CBF CBE SING Y N 2 A1EDN CBG CBH SING Y N 3 A1EDN OBD CBB DOUB N N 4 A1EDN CBL OBK SING N N 5 A1EDN CBB CBA SING N N 6 A1EDN CBB NBC SING N N 7 A1EDN CAT CAS SING N N 8 A1EDN CAT OAU SING N N 9 A1EDN CBA CAZ SING N N 10 A1EDN CAS NAR SING N N 11 A1EDN NBC CBE SING N N 12 A1EDN NBC CAY SING N N 13 A1EDN CBE CBJ DOUB Y N 14 A1EDN CBH OBK SING N N 15 A1EDN CBH CBI DOUB Y N 16 A1EDN CAZ CAY SING N N 17 A1EDN OAU CAV SING N N 18 A1EDN CAY CAN SING N N 19 A1EDN CAX CAQ SING N N 20 A1EDN CBJ CBI SING Y N 21 A1EDN CBI CLBM SING N N 22 A1EDN NAR CAQ SING N N 23 A1EDN NAR CAW SING N N 24 A1EDN CAV CAW SING N N 25 A1EDN CAP CAQ SING N N 26 A1EDN CAP NAM SING N N 27 A1EDN CAN NAM SING Y N 28 A1EDN CAN NAO DOUB Y N 29 A1EDN NAM CAL SING Y N 30 A1EDN NAO CAK SING Y N 31 A1EDN CAL CAK DOUB Y N 32 A1EDN CAK CAF SING N N 33 A1EDN CAF CAE DOUB Y N 34 A1EDN CAF CAA SING Y N 35 A1EDN CAE CAD SING Y N 36 A1EDN CAA CAB DOUB Y N 37 A1EDN CAD CAC DOUB Y N 38 A1EDN CAB CAC SING Y N 39 A1EDN CAB CAI SING Y N 40 A1EDN CAC OAG SING Y N 41 A1EDN CAI CAJ SING N N 42 A1EDN CAI NAH DOUB Y N 43 A1EDN OAG NAH SING Y N 44 A1EDN CAS H1 SING N N 45 A1EDN CAS H2 SING N N 46 A1EDN CAT H3 SING N N 47 A1EDN CAT H4 SING N N 48 A1EDN CAV H5 SING N N 49 A1EDN CAV H6 SING N N 50 A1EDN CAW H7 SING N N 51 A1EDN CAW H8 SING N N 52 A1EDN CAQ H10 SING N N 53 A1EDN CAX H11 SING N N 54 A1EDN CAX H12 SING N N 55 A1EDN CAX H13 SING N N 56 A1EDN CAP H14 SING N N 57 A1EDN CAP H15 SING N N 58 A1EDN CAL H16 SING N N 59 A1EDN CAA H17 SING N N 60 A1EDN CAJ H18 SING N N 61 A1EDN CAJ H19 SING N N 62 A1EDN CAJ H20 SING N N 63 A1EDN CAD H21 SING N N 64 A1EDN CAE H22 SING N N 65 A1EDN CAY H23 SING N N 66 A1EDN CAZ H24 SING N N 67 A1EDN CBA H25 SING N N 68 A1EDN CBJ H26 SING N N 69 A1EDN CBL H27 SING N N 70 A1EDN CBL H28 SING N N 71 A1EDN CBL H29 SING N N 72 A1EDN CBG H30 SING N N 73 A1EDN CBF H31 SING N N 74 A1EDN CAZ H9 SING N N 75 A1EDN CBA H32 SING N N 76 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1EDN InChI InChI 1.06 "InChI=1S/C29H32ClN5O4/c1-18(33-10-12-38-13-11-33)16-34-17-24(20-4-7-26-22(14-20)19(2)32-39-26)31-29(34)25-6-9-28(36)35(25)21-5-8-27(37-3)23(30)15-21/h4-5,7-8,14-15,17-18,25H,6,9-13,16H2,1-3H3/t18-,25+/m1/s1" A1EDN InChIKey InChI 1.06 KUECYLYQFQZBBX-CJAUYULYSA-N A1EDN SMILES_CANONICAL CACTVS 3.385 "COc1ccc(cc1Cl)N2[C@@H](CCC2=O)c3nc(cn3C[C@@H](C)N4CCOCC4)c5ccc6onc(C)c6c5" A1EDN SMILES CACTVS 3.385 "COc1ccc(cc1Cl)N2[CH](CCC2=O)c3nc(cn3C[CH](C)N4CCOCC4)c5ccc6onc(C)c6c5" A1EDN SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c2cc(ccc2on1)c3cn(c(n3)[C@@H]4CCC(=O)N4c5ccc(c(c5)Cl)OC)C[C@@H](C)N6CCOCC6" A1EDN SMILES "OpenEye OEToolkits" 2.0.7 "Cc1c2cc(ccc2on1)c3cn(c(n3)C4CCC(=O)N4c5ccc(c(c5)Cl)OC)CC(C)N6CCOCC6" # _pdbx_chem_comp_identifier.comp_id A1EDN _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(5~{S})-1-(3-chloranyl-4-methoxy-phenyl)-5-[4-(3-methyl-1,2-benzoxazol-5-yl)-1-[(2~{R})-2-morpholin-4-ylpropyl]imidazol-2-yl]pyrrolidin-2-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1EDN "Create component" 2024-10-14 PDBC A1EDN "Initial release" 2025-03-12 RCSB #