data_A1EDO # _chem_comp.id A1EDO _chem_comp.name "(5~{S})-1-(3-chloranyl-4-methoxy-phenyl)-5-[4-(3-methyl-1,2-benzoxazol-5-yl)-1-[(2~{S})-2-morpholin-4-ylpropyl]imidazol-2-yl]pyrrolidin-2-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C29 H32 Cl N5 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-10-14 _chem_comp.pdbx_modified_date 2025-03-07 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 550.048 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1EDO _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9JUY _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBC _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1EDO CAS C1 C 0 1 N N N N N N 8.272 6.535 1.707 -5.068 1.060 1.576 CAS A1EDO 1 A1EDO CAT C2 C 0 1 N N N N N N 7.118 6.638 0.752 -5.953 -0.190 1.581 CAT A1EDO 2 A1EDO OAU O1 O 0 1 N N N N N N 7.333 7.796 -0.065 -6.957 -0.060 0.571 OAU A1EDO 3 A1EDO CAV C3 C 0 1 N N N N N N 8.555 7.664 -0.877 -6.429 0.115 -0.747 CAV A1EDO 4 A1EDO CAW C4 C 0 1 N N N N N N 9.762 7.461 0.035 -5.549 1.367 -0.775 CAW A1EDO 5 A1EDO NAR N1 N 0 1 N N N N N N 9.535 6.330 0.937 -4.489 1.240 0.237 NAR A1EDO 6 A1EDO CAQ C5 C 0 1 N N S N N N 10.757 5.990 1.719 -3.587 2.398 0.203 CAQ A1EDO 7 A1EDO CAX C6 C 0 1 N N N N N N 11.026 7.058 2.813 -4.323 3.633 0.726 CAX A1EDO 8 A1EDO CAP C7 C 0 1 N N N N N N 10.617 4.631 2.308 -2.367 2.120 1.084 CAP A1EDO 9 A1EDO NAM N2 N 0 1 Y N N N N N 11.821 4.281 3.159 -1.596 1.012 0.515 NAM A1EDO 10 A1EDO CAL C8 C 0 1 Y N N N N N 11.840 4.323 4.516 -1.697 -0.307 0.863 CAL A1EDO 11 A1EDO CAK C9 C 0 1 Y N N N N N 13.055 3.985 4.973 -0.806 -0.983 0.092 CAK A1EDO 12 A1EDO CAF C10 C 0 1 Y N N N N N 13.470 3.875 6.311 -0.559 -2.446 0.118 CAF A1EDO 13 A1EDO CAA C11 C 0 1 Y N N N N N 12.775 4.432 7.396 0.461 -2.990 -0.650 CAA A1EDO 14 A1EDO CAB C12 C 0 1 Y N N N N N 13.254 4.279 8.672 0.686 -4.366 -0.620 CAB A1EDO 15 A1EDO CAI C13 C 0 1 Y N N N N N 12.839 4.683 9.824 1.650 -5.248 -1.286 CAI A1EDO 16 A1EDO CAJ C14 C 0 1 N N N N N N 11.615 5.485 9.979 2.726 -4.825 -2.252 CAJ A1EDO 17 A1EDO NAH N3 N 0 1 Y N N N N N 13.631 4.261 10.858 1.406 -6.459 -0.889 NAH A1EDO 18 A1EDO OAG O2 O 0 1 Y N N N N N 14.555 3.605 10.413 0.322 -6.457 0.017 OAG A1EDO 19 A1EDO CAC C15 C 0 1 Y N N N N N 14.343 3.589 8.927 -0.118 -5.192 0.184 CAC A1EDO 20 A1EDO CAD C16 C 0 1 Y N N N N N 15.045 3.069 7.971 -1.137 -4.632 0.947 CAD A1EDO 21 A1EDO CAE C17 C 0 1 Y N N N N N 14.633 3.159 6.626 -1.352 -3.273 0.919 CAE A1EDO 22 A1EDO NAO N4 N 0 1 Y N N N N N 13.809 3.745 3.897 -0.185 -0.085 -0.700 NAO A1EDO 23 A1EDO CAN C18 C 0 1 Y N N N N N 13.056 3.936 2.790 -0.660 1.104 -0.454 CAN A1EDO 24 A1EDO CAY C19 C 0 1 N N S N N N 13.547 3.732 1.448 -0.229 2.376 -1.137 CAY A1EDO 25 A1EDO CAZ C20 C 0 1 N N N N N N 14.179 2.341 1.359 -0.768 2.414 -2.585 CAZ A1EDO 26 A1EDO CBA C21 C 0 1 N N N N N N 15.527 2.693 0.599 0.387 3.119 -3.333 CBA A1EDO 27 A1EDO CBB C22 C 0 1 N N N N N N 15.661 4.091 0.548 1.607 2.836 -2.483 CBB A1EDO 28 A1EDO OBD O3 O 0 1 N N N N N N 16.681 4.709 0.204 2.755 2.968 -2.850 OBD A1EDO 29 A1EDO NBC N5 N 0 1 N N N N N N 14.607 4.712 1.048 1.232 2.418 -1.260 NBC A1EDO 30 A1EDO CBE C23 C 0 1 Y N N N N N 14.413 6.037 1.086 2.124 2.066 -0.238 CBE A1EDO 31 A1EDO CBJ C24 C 0 1 Y N N N N N 14.662 6.764 2.253 3.487 2.008 -0.495 CBJ A1EDO 32 A1EDO CBI C25 C 0 1 Y N N N N N 14.460 8.127 2.240 4.365 1.661 0.514 CBI A1EDO 33 A1EDO CLBM CL1 CL 0 0 N N N N N N 14.760 8.997 3.706 6.070 1.589 0.194 CLBM A1EDO 34 A1EDO CBH C26 C 0 1 Y N N N N N 13.989 8.829 1.163 3.884 1.370 1.783 CBH A1EDO 35 A1EDO OBK O4 O 0 1 N N N N N N 13.845 10.174 1.318 4.748 1.028 2.776 OBK A1EDO 36 A1EDO CBL C27 C 0 1 N N N N N N 13.460 10.980 0.169 4.184 0.742 4.057 CBL A1EDO 37 A1EDO CBG C28 C 0 1 Y N N N N N 13.741 8.105 -0.003 2.522 1.427 2.039 CBG A1EDO 38 A1EDO CBF C29 C 0 1 Y N N N N N 13.938 6.721 -0.016 1.644 1.779 1.033 CBF A1EDO 39 A1EDO H1 H1 H 0 1 N N N N N N 8.346 7.462 2.294 -5.669 1.932 1.833 H1 A1EDO 40 A1EDO H2 H2 H 0 1 N N N N N N 8.113 5.683 2.385 -4.267 0.942 2.306 H2 A1EDO 41 A1EDO H3 H3 H 0 1 N N N N N N 6.177 6.743 1.311 -5.342 -1.069 1.377 H3 A1EDO 42 A1EDO H4 H4 H 0 1 N N N N N N 7.071 5.738 0.122 -6.429 -0.295 2.556 H4 A1EDO 43 A1EDO H5 H5 H 0 1 N N N N N N 8.455 6.799 -1.549 -5.832 -0.756 -1.018 H5 A1EDO 44 A1EDO H6 H6 H 0 1 N N N N N N 8.697 8.577 -1.474 -7.249 0.230 -1.455 H6 A1EDO 45 A1EDO H7 H7 H 0 1 N N N N N N 10.652 7.261 -0.580 -5.099 1.473 -1.762 H7 A1EDO 46 A1EDO H8 H8 H 0 1 N N N N N N 9.924 8.372 0.630 -6.157 2.245 -0.556 H8 A1EDO 47 A1EDO H10 H10 H 0 1 N N N N N N 11.619 5.987 1.035 -3.262 2.576 -0.822 H10 A1EDO 48 A1EDO H11 H11 H 0 1 N N N N N N 11.931 6.787 3.376 -3.653 4.493 0.702 H11 A1EDO 49 A1EDO H12 H12 H 0 1 N N N N N N 11.170 8.040 2.339 -5.192 3.831 0.099 H12 A1EDO 50 A1EDO H13 H13 H 0 1 N N N N N N 10.167 7.104 3.499 -4.648 3.455 1.752 H13 A1EDO 51 A1EDO H14 H14 H 0 1 N N N N N N 9.713 4.602 2.934 -1.742 3.012 1.131 H14 A1EDO 52 A1EDO H15 H15 H 0 1 N N N N N N 10.524 3.895 1.496 -2.697 1.855 2.089 H15 A1EDO 53 A1EDO H16 H16 H 0 1 N N N N N N 10.998 4.590 5.138 -2.356 -0.729 1.607 H16 A1EDO 54 A1EDO H17 H17 H 0 1 N N N N N N 11.861 4.982 7.226 1.077 -2.352 -1.267 H17 A1EDO 55 A1EDO H18 H18 H 0 1 N N N N N N 11.442 5.688 11.046 3.640 -4.599 -1.703 H18 A1EDO 56 A1EDO H19 H19 H 0 1 N N N N N N 11.729 6.436 9.439 2.917 -5.633 -2.959 H19 A1EDO 57 A1EDO H20 H20 H 0 1 N N N N N N 10.759 4.930 9.568 2.399 -3.938 -2.795 H20 A1EDO 58 A1EDO H21 H21 H 0 1 N N N N N N 15.965 2.556 8.209 -1.757 -5.264 1.566 H21 A1EDO 59 A1EDO H22 H22 H 0 1 N N N N N N 15.208 2.681 5.846 -2.141 -2.843 1.517 H22 A1EDO 60 A1EDO H23 H23 H 0 1 N N N N N N 12.714 3.788 0.732 -0.586 3.243 -0.580 H23 A1EDO 61 A1EDO H24 H24 H 0 1 N N N N N N 13.554 1.646 0.779 -0.924 1.406 -2.970 H24 A1EDO 62 A1EDO H25 H25 H 0 1 N N N N N N 14.372 1.917 2.355 -1.686 2.999 -2.645 H25 A1EDO 63 A1EDO H26 H26 H 0 1 N N N N N N 15.494 2.286 -0.423 0.511 2.697 -4.330 H26 A1EDO 64 A1EDO H27 H27 H 0 1 N N N N N N 16.381 2.258 1.139 0.204 4.192 -3.394 H27 A1EDO 65 A1EDO H28 H28 H 0 1 N N N N N N 15.006 6.267 3.148 3.861 2.234 -1.482 H28 A1EDO 66 A1EDO H29 H29 H 0 1 N N N N N N 13.390 12.036 0.468 4.981 0.485 4.756 H29 A1EDO 67 A1EDO H30 H30 H 0 1 N N N N N N 14.215 10.873 -0.623 3.650 1.618 4.423 H30 A1EDO 68 A1EDO H31 H31 H 0 1 N N N N N N 12.484 10.640 -0.207 3.493 -0.096 3.971 H31 A1EDO 69 A1EDO H32 H32 H 0 1 N N N N N N 13.398 8.612 -0.893 2.148 1.201 3.027 H32 A1EDO 70 A1EDO H33 H33 H 0 1 N N N N N N 13.712 6.169 -0.916 0.584 1.824 1.233 H33 A1EDO 71 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1EDO CAV OAU SING N N 1 A1EDO CAV CAW SING N N 2 A1EDO OAU CAT SING N N 3 A1EDO CBF CBG DOUB Y N 4 A1EDO CBF CBE SING Y N 5 A1EDO CBG CBH SING Y N 6 A1EDO CAW NAR SING N N 7 A1EDO CBL OBK SING N N 8 A1EDO OBD CBB DOUB N N 9 A1EDO CBB CBA SING N N 10 A1EDO CBB NBC SING N N 11 A1EDO CBA CAZ SING N N 12 A1EDO CAT CAS SING N N 13 A1EDO NAR CAS SING N N 14 A1EDO NAR CAQ SING N N 15 A1EDO NBC CBE SING N N 16 A1EDO NBC CAY SING N N 17 A1EDO CBE CBJ DOUB Y N 18 A1EDO CBH OBK SING N N 19 A1EDO CBH CBI DOUB Y N 20 A1EDO CAZ CAY SING N N 21 A1EDO CAY CAN SING N N 22 A1EDO CAQ CAP SING N N 23 A1EDO CAQ CAX SING N N 24 A1EDO CBI CBJ SING Y N 25 A1EDO CBI CLBM SING N N 26 A1EDO CAP NAM SING N N 27 A1EDO CAN NAM SING Y N 28 A1EDO CAN NAO DOUB Y N 29 A1EDO NAM CAL SING Y N 30 A1EDO NAO CAK SING Y N 31 A1EDO CAL CAK DOUB Y N 32 A1EDO CAK CAF SING N N 33 A1EDO CAF CAE DOUB Y N 34 A1EDO CAF CAA SING Y N 35 A1EDO CAE CAD SING Y N 36 A1EDO CAA CAB DOUB Y N 37 A1EDO CAD CAC DOUB Y N 38 A1EDO CAB CAC SING Y N 39 A1EDO CAB CAI SING Y N 40 A1EDO CAC OAG SING Y N 41 A1EDO CAI CAJ SING N N 42 A1EDO CAI NAH DOUB Y N 43 A1EDO OAG NAH SING Y N 44 A1EDO CAS H1 SING N N 45 A1EDO CAS H2 SING N N 46 A1EDO CAT H3 SING N N 47 A1EDO CAT H4 SING N N 48 A1EDO CAV H5 SING N N 49 A1EDO CAV H6 SING N N 50 A1EDO CAW H7 SING N N 51 A1EDO CAW H8 SING N N 52 A1EDO CAQ H10 SING N N 53 A1EDO CAX H11 SING N N 54 A1EDO CAX H12 SING N N 55 A1EDO CAX H13 SING N N 56 A1EDO CAP H14 SING N N 57 A1EDO CAP H15 SING N N 58 A1EDO CAL H16 SING N N 59 A1EDO CAA H17 SING N N 60 A1EDO CAJ H18 SING N N 61 A1EDO CAJ H19 SING N N 62 A1EDO CAJ H20 SING N N 63 A1EDO CAD H21 SING N N 64 A1EDO CAE H22 SING N N 65 A1EDO CAY H23 SING N N 66 A1EDO CAZ H24 SING N N 67 A1EDO CAZ H25 SING N N 68 A1EDO CBA H26 SING N N 69 A1EDO CBA H27 SING N N 70 A1EDO CBJ H28 SING N N 71 A1EDO CBL H29 SING N N 72 A1EDO CBL H30 SING N N 73 A1EDO CBL H31 SING N N 74 A1EDO CBG H32 SING N N 75 A1EDO CBF H33 SING N N 76 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1EDO InChI InChI 1.06 "InChI=1S/C29H32ClN5O4/c1-18(33-10-12-38-13-11-33)16-34-17-24(20-4-7-26-22(14-20)19(2)32-39-26)31-29(34)25-6-9-28(36)35(25)21-5-8-27(37-3)23(30)15-21/h4-5,7-8,14-15,17-18,25H,6,9-13,16H2,1-3H3/t18-,25-/m0/s1" A1EDO InChIKey InChI 1.06 KUECYLYQFQZBBX-BVZFJXPGSA-N A1EDO SMILES_CANONICAL CACTVS 3.385 "COc1ccc(cc1Cl)N2[C@@H](CCC2=O)c3nc(cn3C[C@H](C)N4CCOCC4)c5ccc6onc(C)c6c5" A1EDO SMILES CACTVS 3.385 "COc1ccc(cc1Cl)N2[CH](CCC2=O)c3nc(cn3C[CH](C)N4CCOCC4)c5ccc6onc(C)c6c5" A1EDO SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c2cc(ccc2on1)c3cn(c(n3)[C@@H]4CCC(=O)N4c5ccc(c(c5)Cl)OC)C[C@H](C)N6CCOCC6" A1EDO SMILES "OpenEye OEToolkits" 2.0.7 "Cc1c2cc(ccc2on1)c3cn(c(n3)C4CCC(=O)N4c5ccc(c(c5)Cl)OC)CC(C)N6CCOCC6" # _pdbx_chem_comp_identifier.comp_id A1EDO _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(5~{S})-1-(3-chloranyl-4-methoxy-phenyl)-5-[4-(3-methyl-1,2-benzoxazol-5-yl)-1-[(2~{S})-2-morpholin-4-ylpropyl]imidazol-2-yl]pyrrolidin-2-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1EDO "Create component" 2024-10-14 PDBC A1EDO "Initial release" 2025-03-12 RCSB #