data_A1EIV # _chem_comp.id A1EIV _chem_comp.name "[(2~{R},3~{S},4~{R},5~{R})-3,4-bis(oxidanyl)-5-(3-sulfanylpyridin-1-yl)oxolan-2-yl]methyl dihydrogen phosphate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C10 H15 N O7 P S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 2024-12-31 _chem_comp.pdbx_modified_date 2025-03-07 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 324.267 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1EIV _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9L2D _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBC _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1EIV C15 C1 C 0 1 Y N N N N N 220.777 197.147 170.818 -1.965 -0.982 1.095 C15 A1EIV 1 A1EIV C17 C2 C 0 1 Y N N N N N 222.066 195.658 172.219 -4.184 -1.855 0.965 C17 A1EIV 2 A1EIV C20 C3 C 0 1 Y N N N N N 223.133 197.396 170.967 -3.377 -0.162 -0.531 C20 A1EIV 3 A1EIV O01 O1 O 0 1 N N N N N N 220.826 200.285 166.549 0.743 3.553 0.058 O01 A1EIV 4 A1EIV C02 C4 C 0 1 N N S N N N 220.561 199.333 167.508 0.455 2.260 0.596 C02 A1EIV 5 A1EIV C03 C5 C 0 1 N N R N N N 221.889 198.669 168.016 -1.059 1.964 0.514 C03 A1EIV 6 A1EIV O04 O2 O 0 1 N N N N N N 223.031 199.277 167.519 -1.753 3.064 -0.078 O04 A1EIV 7 A1EIV C05 C6 C 0 1 N N R N N N 221.886 198.982 169.506 -1.148 0.717 -0.393 C05 A1EIV 8 A1EIV O06 O3 O 0 1 N N N N N N 220.605 199.515 169.848 0.141 0.078 -0.270 O06 A1EIV 9 A1EIV C07 C7 C 0 1 N N R N N N 219.914 199.979 168.719 1.102 1.157 -0.270 C07 A1EIV 10 A1EIV C08 C8 C 0 1 N N N N N N 218.389 199.630 168.880 2.421 0.696 0.352 C08 A1EIV 11 A1EIV O09 O4 O 0 1 N N N N N N 218.272 198.406 169.361 3.059 -0.239 -0.522 O09 A1EIV 12 A1EIV P10 P1 P 0 1 N N N N N N 216.914 197.331 168.812 4.472 -0.932 -0.184 P10 A1EIV 13 A1EIV O11 O5 O 0 1 N N N N N N 215.984 198.328 168.187 4.311 -1.876 1.110 O11 A1EIV 14 A1EIV O12 O6 O 0 1 N N N N N N 216.463 196.772 170.133 4.948 -1.819 -1.440 O12 A1EIV 15 A1EIV O13 O7 O 0 1 N N N N N N 217.570 196.354 167.862 5.481 0.115 0.092 O13 A1EIV 16 A1EIV N14 N1 N 1 1 Y N N N N N 221.921 197.814 170.455 -2.208 -0.180 0.076 N14 A1EIV 17 A1EIV C16 C9 C 0 1 Y N N N N N 220.843 196.078 171.694 -2.938 -1.843 1.569 C16 A1EIV 18 A1EIV C18 C10 C 0 1 Y N N N N N 223.235 196.323 171.857 -4.409 -0.991 -0.105 C18 A1EIV 19 A1EIV S19 S1 S 0 1 N N N N N N 224.829 195.863 172.466 -5.977 -0.949 -0.906 S19 A1EIV 20 A1EIV H1 H1 H 0 1 N N N N N N 219.823 197.458 170.419 -0.992 -0.969 1.562 H1 A1EIV 21 A1EIV H2 H2 H 0 1 N N N N N N 222.106 194.822 172.902 -4.962 -2.517 1.314 H2 A1EIV 22 A1EIV H3 H3 H 0 1 N N N N N N 224.032 197.915 170.670 -3.540 0.511 -1.359 H3 A1EIV 23 A1EIV H4 H4 H 0 1 N N N N N N 220.011 200.674 166.255 0.312 4.279 0.528 H4 A1EIV 24 A1EIV H5 H5 H 0 1 N N N N N N 219.900 198.545 167.119 0.803 2.191 1.627 H5 A1EIV 25 A1EIV H6 H6 H 0 1 N N N N N N 221.865 197.583 167.841 -1.460 1.746 1.504 H6 A1EIV 26 A1EIV H7 H7 H 0 1 N N N N N N 223.800 198.834 167.859 -1.679 3.890 0.420 H7 A1EIV 27 A1EIV H8 H8 H 0 1 N N N N N N 222.693 199.691 169.744 -1.329 1.011 -1.427 H8 A1EIV 28 A1EIV H9 H9 H 0 1 N N N N N N 220.009 201.071 168.632 1.268 1.520 -1.285 H9 A1EIV 29 A1EIV H10 H10 H 0 1 N N N N N N 217.919 200.344 169.573 3.073 1.556 0.501 H10 A1EIV 30 A1EIV H11 H11 H 0 1 N N N N N N 217.893 199.689 167.900 2.223 0.219 1.312 H11 A1EIV 31 A1EIV H12 H12 H 0 1 N N N N N N 215.950 198.185 167.249 3.664 -2.586 1.001 H12 A1EIV 32 A1EIV H13 H13 H 0 1 N N N N N N 216.669 195.845 170.172 5.795 -2.267 -1.306 H13 A1EIV 33 A1EIV H14 H14 H 0 1 N N N N N N 219.937 195.562 171.975 -2.727 -2.499 2.401 H14 A1EIV 34 A1EIV H15 H15 H 0 1 N N N N N N 224.543 194.860 173.242 -5.846 -1.871 -1.878 H15 A1EIV 35 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1EIV O01 C02 SING N N 1 A1EIV C02 C03 SING N N 2 A1EIV C02 C07 SING N N 3 A1EIV O04 C03 SING N N 4 A1EIV O13 P10 DOUB N N 5 A1EIV C03 C05 SING N N 6 A1EIV O11 P10 SING N N 7 A1EIV C07 C08 SING N N 8 A1EIV C07 O06 SING N N 9 A1EIV P10 O09 SING N N 10 A1EIV P10 O12 SING N N 11 A1EIV C08 O09 SING N N 12 A1EIV C05 O06 SING N N 13 A1EIV C05 N14 SING N N 14 A1EIV N14 C15 DOUB Y N 15 A1EIV N14 C20 SING Y N 16 A1EIV C15 C16 SING Y N 17 A1EIV C20 C18 DOUB Y N 18 A1EIV C16 C17 DOUB Y N 19 A1EIV C18 C17 SING Y N 20 A1EIV C18 S19 SING N N 21 A1EIV C15 H1 SING N N 22 A1EIV C17 H2 SING N N 23 A1EIV C20 H3 SING N N 24 A1EIV O01 H4 SING N N 25 A1EIV C02 H5 SING N N 26 A1EIV C03 H6 SING N N 27 A1EIV O04 H7 SING N N 28 A1EIV C05 H8 SING N N 29 A1EIV C07 H9 SING N N 30 A1EIV C08 H10 SING N N 31 A1EIV C08 H11 SING N N 32 A1EIV O11 H12 SING N N 33 A1EIV O12 H13 SING N N 34 A1EIV C16 H14 SING N N 35 A1EIV S19 H15 SING N N 36 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1EIV InChI InChI 1.06 "InChI=1S/C10H14NO7PS/c12-8-7(5-17-19(14,15)16)18-10(9(8)13)11-3-1-2-6(20)4-11/h1-4,7-10,12-13H,5H2,(H2-,14,15,16,20)/p+1/t7-,8-,9-,10-/m1/s1" A1EIV InChIKey InChI 1.06 VITCWSBGSROZMF-ZYUZMQFOSA-O A1EIV SMILES_CANONICAL CACTVS 3.385 "O[C@H]1[C@@H](O)[C@@H](O[C@@H]1CO[P](O)(O)=O)[n+]2cccc(S)c2" A1EIV SMILES CACTVS 3.385 "O[CH]1[CH](O)[CH](O[CH]1CO[P](O)(O)=O)[n+]2cccc(S)c2" A1EIV SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(c[n+](c1)[C@H]2[C@@H]([C@@H]([C@H](O2)COP(=O)(O)O)O)O)S" A1EIV SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(c[n+](c1)C2C(C(C(O2)COP(=O)(O)O)O)O)S" # _pdbx_chem_comp_identifier.comp_id A1EIV _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[(2~{R},3~{S},4~{R},5~{R})-3,4-bis(oxidanyl)-5-(3-sulfanylpyridin-1-ium-1-yl)oxolan-2-yl]methyl dihydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1EIV "Create component" 2024-12-31 PDBC A1EIV "Initial release" 2025-03-12 RCSB #