data_A1EKC # _chem_comp.id A1EKC _chem_comp.name "(3~{R})-3-[(3~{R})-4-fluoranyl-1-oxidanyl-3~{H}-2,1-benzoxaborol-3-yl]-2-methylidene-butanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H12 B F O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-01-19 _chem_comp.pdbx_modified_date 2025-12-26 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 250.031 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1EKC _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9L7A _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBC _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1EKC C10 C1 C 0 1 Y N N N N N -16.104 -11.962 127.943 3.301 0.196 -0.570 C10 A1EKC 1 A1EKC C11 C2 C 0 1 Y N N N N N -15.770 -11.147 126.902 2.292 0.815 0.151 C11 A1EKC 2 A1EKC C14 C3 C 0 1 N N N N N N -15.914 -6.871 124.653 -1.196 1.123 -0.813 C14 A1EKC 3 A1EKC C13 C4 C 0 1 Y N N N N N -15.609 -9.807 127.136 1.172 0.099 0.528 C13 A1EKC 4 A1EKC C15 C5 C 0 1 N N N N N N -15.139 -6.938 123.655 -0.621 1.651 -1.891 C15 A1EKC 5 A1EKC C16 C6 C 0 1 N N N N N N -16.444 -5.532 125.048 -2.216 0.076 -0.962 C16 A1EKC 6 A1EKC C01 C7 C 0 1 N N N N N N -16.962 -9.193 124.570 -2.054 1.988 1.347 C01 A1EKC 7 A1EKC C02 C8 C 0 1 N N R N N N -16.373 -8.112 125.471 -0.800 1.599 0.562 C02 A1EKC 8 A1EKC C03 C9 C 0 1 N N R N N N -15.227 -8.669 126.217 -0.065 0.477 1.297 C03 A1EKC 9 A1EKC O04 O1 O 0 1 N N N N N N -14.824 -7.584 127.094 -0.919 -0.660 1.409 O04 A1EKC 10 A1EKC B05 B1 B 0 1 N N N N N N -15.444 -7.808 128.327 -0.304 -1.760 0.752 B05 A1EKC 11 A1EKC O06 O2 O 0 1 N N N N N N -16.341 -6.847 128.603 -0.829 -3.074 0.635 O06 A1EKC 12 A1EKC C07 C10 C 0 1 Y N N N N N -15.695 -9.340 128.366 1.066 -1.248 0.180 C07 A1EKC 13 A1EKC C08 C11 C 0 1 Y N N N N N -16.044 -10.160 129.412 2.081 -1.865 -0.542 C08 A1EKC 14 A1EKC C09 C12 C 0 1 Y N N N N N -16.226 -11.469 129.189 3.196 -1.139 -0.915 C09 A1EKC 15 A1EKC F12 F1 F 0 1 N N N N N N -15.648 -11.571 125.640 2.402 2.120 0.484 F12 A1EKC 16 A1EKC O17 O3 O 0 1 N N N N N N -17.090 -5.463 126.061 -2.886 -0.371 0.118 O17 A1EKC 17 A1EKC O18 O4 O 0 1 N N N N N N -16.222 -4.560 124.328 -2.455 -0.387 -2.060 O18 A1EKC 18 A1EKC H101 H1 H 0 0 N N N N N N -16.272 -13.014 127.766 4.173 0.761 -0.867 H101 A1EKC 19 A1EKC H151 H2 H 0 0 N N N N N N -14.759 -7.895 123.330 0.129 2.421 -1.781 H151 A1EKC 20 A1EKC H152 H3 H 0 0 N N N N N N -14.857 -6.038 123.129 -0.905 1.310 -2.875 H152 A1EKC 21 A1EKC H013 H4 H 0 0 N N N N N N -17.274 -10.052 125.183 -1.763 2.451 2.290 H013 A1EKC 22 A1EKC H012 H5 H 0 0 N N N N N N -17.834 -8.789 124.034 -2.645 2.693 0.763 H012 A1EKC 23 A1EKC H011 H6 H 0 0 N N N N N N -16.203 -9.518 123.843 -2.648 1.096 1.549 H011 A1EKC 24 A1EKC H021 H7 H 0 0 N N N N N N -17.147 -7.788 126.183 -0.145 2.466 0.471 H021 A1EKC 25 A1EKC H031 H8 H 0 0 N N N N N N -14.414 -8.969 125.539 0.217 0.819 2.293 H031 A1EKC 26 A1EKC H061 H9 H 0 0 N N N N N N -16.359 -6.217 127.892 -1.692 -3.192 1.057 H061 A1EKC 27 A1EKC H081 H10 H 0 0 N N N N N N -16.170 -9.753 130.405 1.998 -2.907 -0.811 H081 A1EKC 28 A1EKC H091 H11 H 0 0 N N N N N N -16.470 -12.128 130.009 3.984 -1.614 -1.480 H091 A1EKC 29 A1EKC H1 H12 H 0 1 N N N N N N -17.379 -4.568 126.192 -3.548 -1.061 -0.030 H1 A1EKC 30 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1EKC C15 C14 DOUB N N 1 A1EKC O18 C16 DOUB N N 2 A1EKC C01 C02 SING N N 3 A1EKC C14 C16 SING N N 4 A1EKC C14 C02 SING N N 5 A1EKC C16 O17 SING N N 6 A1EKC C02 C03 SING N N 7 A1EKC F12 C11 SING N N 8 A1EKC C03 O04 SING N N 9 A1EKC C03 C13 SING N N 10 A1EKC C11 C13 DOUB Y N 11 A1EKC C11 C10 SING Y N 12 A1EKC O04 B05 SING N N 13 A1EKC C13 C07 SING Y N 14 A1EKC C10 C09 DOUB Y N 15 A1EKC B05 C07 SING N N 16 A1EKC B05 O06 SING N N 17 A1EKC C07 C08 DOUB Y N 18 A1EKC C09 C08 SING Y N 19 A1EKC C10 H101 SING N N 20 A1EKC C15 H151 SING N N 21 A1EKC C15 H152 SING N N 22 A1EKC C01 H013 SING N N 23 A1EKC C01 H012 SING N N 24 A1EKC C01 H011 SING N N 25 A1EKC C02 H021 SING N N 26 A1EKC C03 H031 SING N N 27 A1EKC O06 H061 SING N N 28 A1EKC C08 H081 SING N N 29 A1EKC C09 H091 SING N N 30 A1EKC O17 H1 SING N N 31 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1EKC InChI InChI 1.06 "InChI=1S/C12H12BFO4/c1-6(7(2)12(15)16)11-10-8(13(17)18-11)4-3-5-9(10)14/h3-6,11,17H,2H2,1H3,(H,15,16)/t6-,11-/m1/s1" A1EKC InChIKey InChI 1.06 ZCBYIGIEBWTKJG-KSBSHMNSSA-N A1EKC SMILES_CANONICAL CACTVS 3.385 "C[C@@H]([C@H]1OB(O)c2cccc(F)c12)C(=C)C(O)=O" A1EKC SMILES CACTVS 3.385 "C[CH]([CH]1OB(O)c2cccc(F)c12)C(=C)C(O)=O" A1EKC SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "B1(c2cccc(c2[C@H](O1)[C@H](C)C(=C)C(=O)O)F)O" A1EKC SMILES "OpenEye OEToolkits" 2.0.7 "B1(c2cccc(c2C(O1)C(C)C(=C)C(=O)O)F)O" # _pdbx_chem_comp_identifier.comp_id A1EKC _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(3~{R})-3-[(3~{R})-4-fluoranyl-1-oxidanyl-3~{H}-2,1-benzoxaborol-3-yl]-2-methylidene-butanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1EKC "Create component" 2025-01-19 PDBC A1EKC "Initial release" 2025-12-31 RCSB #