data_A1EKL # _chem_comp.id A1EKL _chem_comp.name Flupentixol _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H25 F3 N2 O S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-01-21 _chem_comp.pdbx_modified_date 2026-02-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 434.518 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1EKL _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9LLG _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBC _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1EKL C10 C1 C 0 1 N N N N N N 102.291 111.123 125.842 0.836 -1.380 -0.900 C10 A1EKL 1 A1EKL C13 C2 C 0 1 Y N N N N N 100.892 113.834 123.607 3.260 0.728 0.886 C13 A1EKL 2 A1EKL C15 C3 C 0 1 Y N N N N N 102.332 111.885 122.196 4.248 -1.827 0.385 C15 A1EKL 3 A1EKL C17 C4 C 0 1 Y N N N N N 102.325 109.629 123.132 3.085 -3.066 -1.332 C17 A1EKL 4 A1EKL C20 C5 C 0 1 Y N N N N N 102.688 111.396 120.889 5.272 -2.774 0.346 C20 A1EKL 5 A1EKL C21 C6 C 0 1 Y N N N N N 100.066 114.955 123.455 3.402 2.053 1.296 C21 A1EKL 6 A1EKL C22 C7 C 0 1 Y N N N N N 99.056 115.166 124.419 2.533 3.021 0.839 C22 A1EKL 7 A1EKL C24 C8 C 0 1 N N N N N N 97.781 114.515 126.532 0.565 3.750 -0.526 C24 A1EKL 8 A1EKL C28 C9 C 0 1 Y N N N N N 99.727 113.135 125.617 1.358 1.381 -0.450 C28 A1EKL 9 A1EKL C02 C10 C 0 1 N N N N N N 100.376 114.032 132.547 -7.273 -1.939 0.362 C02 A1EKL 10 A1EKL C03 C11 C 0 1 N N N N N N 100.958 112.660 132.076 -6.015 -1.482 -0.379 C03 A1EKL 11 A1EKL C05 C12 C 0 1 N N N N N N 99.527 112.487 130.435 -4.801 -0.591 1.518 C05 A1EKL 12 A1EKL C06 C13 C 0 1 N N N N N N 100.400 112.195 129.209 -3.572 -1.454 1.222 C06 A1EKL 13 A1EKL C08 C14 C 0 1 N N N N N N 101.238 110.472 128.022 -1.447 -1.495 0.062 C08 A1EKL 14 A1EKL C09 C15 C 0 1 N N N N N N 102.039 111.592 127.279 -0.386 -0.573 -0.541 C09 A1EKL 15 A1EKL C11 C16 C 0 1 N N N N N N 101.747 111.660 124.721 2.045 -0.996 -0.464 C11 A1EKL 16 A1EKL C12 C17 C 0 1 Y N N N N N 100.753 112.933 124.653 2.232 0.391 0.005 C12 A1EKL 17 A1EKL C16 C18 C 0 1 Y N N N N N 102.148 111.044 123.276 3.148 -1.974 -0.461 C16 A1EKL 18 A1EKL C18 C19 C 0 1 Y N N N N N 102.684 109.131 121.851 4.105 -3.992 -1.357 C18 A1EKL 19 A1EKL C19 C20 C 0 1 Y N N N N N 102.862 110.001 120.747 5.198 -3.845 -0.518 C19 A1EKL 20 A1EKL C23 C21 C 0 1 Y N N N N N 98.894 114.261 125.487 1.511 2.686 -0.033 C23 A1EKL 21 A1EKL C29 C22 C 0 1 N N N N N N 101.237 110.324 130.218 -3.360 -0.407 -0.950 C29 A1EKL 22 A1EKL C30 C23 C 0 1 N N N N N N 100.419 110.628 131.485 -4.589 0.456 -0.654 C30 A1EKL 23 A1EKL F25 F1 F 0 1 N N N N N N 96.715 113.686 126.276 -0.724 3.486 -0.049 F25 A1EKL 24 A1EKL F26 F2 F 0 1 N N N N N N 98.267 114.260 127.770 0.987 5.001 -0.063 F26 A1EKL 25 A1EKL F27 F3 F 0 1 N N N N N N 97.374 115.818 126.455 0.553 3.751 -1.925 F27 A1EKL 26 A1EKL N04 N1 N 0 1 N N N N N N 100.029 111.941 131.585 -5.485 -0.269 0.257 N04 A1EKL 27 A1EKL N07 N2 N 0 1 N N N N N N 100.651 110.848 129.110 -2.676 -0.729 0.311 N07 A1EKL 28 A1EKL O01 O1 O 0 1 N N N N N N 100.613 114.160 133.922 -8.289 -0.943 0.235 O01 A1EKL 29 A1EKL S14 S1 S 0 1 N N N N N N 102.116 113.645 122.346 4.381 -0.477 1.502 S14 A1EKL 30 A1EKL H1 H1 H 0 1 N N N N N N 102.963 110.288 125.709 0.737 -2.270 -1.504 H1 A1EKL 31 A1EKL H2 H2 H 0 1 N N N N N N 102.190 108.962 123.971 2.235 -3.184 -1.987 H2 A1EKL 32 A1EKL H3 H3 H 0 1 N N N N N N 102.817 112.067 120.053 6.127 -2.667 0.996 H3 A1EKL 33 A1EKL H4 H4 H 0 1 N N N N N N 100.197 115.636 122.627 4.197 2.322 1.976 H4 A1EKL 34 A1EKL H5 H5 H 0 1 N N N N N N 98.405 116.024 124.338 2.651 4.044 1.163 H5 A1EKL 35 A1EKL H6 H6 H 0 1 N N N N N N 99.590 112.439 126.431 0.559 1.124 -1.130 H6 A1EKL 36 A1EKL H7 H7 H 0 1 N N N N N N 100.871 114.852 132.006 -7.627 -2.876 -0.068 H7 A1EKL 37 A1EKL H8 H8 H 0 1 N N N N N N 99.294 114.064 132.351 -7.040 -2.088 1.416 H8 A1EKL 38 A1EKL H9 H9 H 0 1 N N N N N N 101.406 112.140 132.935 -5.263 -2.271 -0.340 H9 A1EKL 39 A1EKL H10 H10 H 0 1 N N N N N N 101.728 112.834 131.310 -6.263 -1.269 -1.419 H10 A1EKL 40 A1EKL H11 H11 H 0 1 N N N N N N 99.457 113.577 130.565 -5.481 -1.138 2.171 H11 A1EKL 41 A1EKL H12 H12 H 0 1 N N N N N N 98.523 112.073 130.258 -4.490 0.331 2.008 H12 A1EKL 42 A1EKL H13 H13 H 0 1 N N N N N N 101.353 112.735 129.306 -3.047 -1.670 2.153 H13 A1EKL 43 A1EKL H14 H14 H 0 1 N N N N N N 99.877 112.534 128.303 -3.887 -2.388 0.757 H14 A1EKL 44 A1EKL H15 H15 H 0 1 N N N N N N 100.469 110.090 127.335 -1.659 -2.308 -0.632 H15 A1EKL 45 A1EKL H16 H16 H 0 1 N N N N N N 101.939 109.663 128.275 -1.079 -1.906 1.002 H16 A1EKL 46 A1EKL H17 H17 H 0 1 N N N N N N 102.998 111.765 127.789 -0.114 0.194 0.185 H17 A1EKL 47 A1EKL H18 H18 H 0 1 N N N N N N 101.455 112.524 127.270 -0.784 -0.099 -1.439 H18 A1EKL 48 A1EKL H19 H19 H 0 1 N N N N N N 102.824 108.069 121.716 4.052 -4.834 -2.031 H19 A1EKL 49 A1EKL H20 H20 H 0 1 N N N N N N 103.134 109.593 119.785 5.995 -4.573 -0.541 H20 A1EKL 50 A1EKL H21 H21 H 0 1 N N N N N N 101.318 109.234 130.098 -3.672 -1.329 -1.440 H21 A1EKL 51 A1EKL H22 H22 H 0 1 N N N N N N 102.242 110.756 130.329 -2.680 0.140 -1.603 H22 A1EKL 52 A1EKL H23 H23 H 0 1 N N N N N N 99.518 109.997 131.477 -4.274 1.389 -0.189 H23 A1EKL 53 A1EKL H24 H24 H 0 1 N N N N N N 101.033 110.380 132.363 -5.114 0.672 -1.585 H24 A1EKL 54 A1EKL H27 H27 H 0 1 N N N N N N 100.266 114.990 134.228 -9.117 -1.166 0.681 H27 A1EKL 55 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1EKL C19 C20 DOUB Y N 1 A1EKL C19 C18 SING Y N 2 A1EKL C20 C15 SING Y N 3 A1EKL C18 C17 DOUB Y N 4 A1EKL C15 S14 SING N N 5 A1EKL C15 C16 DOUB Y N 6 A1EKL S14 C13 SING N N 7 A1EKL C17 C16 SING Y N 8 A1EKL C16 C11 SING N N 9 A1EKL C21 C13 DOUB Y N 10 A1EKL C21 C22 SING Y N 11 A1EKL C13 C12 SING Y N 12 A1EKL C22 C23 DOUB Y N 13 A1EKL C12 C11 SING N N 14 A1EKL C12 C28 DOUB Y N 15 A1EKL C11 C10 DOUB N Z 16 A1EKL C23 C28 SING Y N 17 A1EKL C23 C24 SING N N 18 A1EKL C10 C09 SING N N 19 A1EKL F25 C24 SING N N 20 A1EKL F27 C24 SING N N 21 A1EKL C24 F26 SING N N 22 A1EKL C09 C08 SING N N 23 A1EKL C08 N07 SING N N 24 A1EKL N07 C06 SING N N 25 A1EKL N07 C29 SING N N 26 A1EKL C06 C05 SING N N 27 A1EKL C29 C30 SING N N 28 A1EKL C05 N04 SING N N 29 A1EKL C30 N04 SING N N 30 A1EKL N04 C03 SING N N 31 A1EKL C03 C02 SING N N 32 A1EKL C02 O01 SING N N 33 A1EKL C10 H1 SING N N 34 A1EKL C17 H2 SING N N 35 A1EKL C20 H3 SING N N 36 A1EKL C21 H4 SING N N 37 A1EKL C22 H5 SING N N 38 A1EKL C28 H6 SING N N 39 A1EKL C02 H7 SING N N 40 A1EKL C02 H8 SING N N 41 A1EKL C03 H9 SING N N 42 A1EKL C03 H10 SING N N 43 A1EKL C05 H11 SING N N 44 A1EKL C05 H12 SING N N 45 A1EKL C06 H13 SING N N 46 A1EKL C06 H14 SING N N 47 A1EKL C08 H15 SING N N 48 A1EKL C08 H16 SING N N 49 A1EKL C09 H17 SING N N 50 A1EKL C09 H18 SING N N 51 A1EKL C18 H19 SING N N 52 A1EKL C19 H20 SING N N 53 A1EKL C29 H21 SING N N 54 A1EKL C29 H22 SING N N 55 A1EKL C30 H23 SING N N 56 A1EKL C30 H24 SING N N 57 A1EKL O01 H27 SING N N 58 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1EKL InChI InChI 1.06 "InChI=1S/C23H25F3N2OS/c24-23(25,26)17-7-8-22-20(16-17)18(19-4-1-2-6-21(19)30-22)5-3-9-27-10-12-28(13-11-27)14-15-29/h1-2,4-8,16,29H,3,9-15H2/b18-5-" A1EKL InChIKey InChI 1.06 NJMYODHXAKYRHW-DVZOWYKESA-N A1EKL SMILES_CANONICAL CACTVS 3.385 "OCCN1CCN(CC\C=C/2c3ccccc3Sc4ccc(cc/24)C(F)(F)F)CC1" A1EKL SMILES CACTVS 3.385 "OCCN1CCN(CCC=C2c3ccccc3Sc4ccc(cc24)C(F)(F)F)CC1" A1EKL SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)/C(=C/CCN3CCN(CC3)CCO)/c4cc(ccc4S2)C(F)(F)F" A1EKL SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)C(=CCCN3CCN(CC3)CCO)c4cc(ccc4S2)C(F)(F)F" # _pdbx_chem_comp_identifier.comp_id A1EKL _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-[4-[(3~{Z})-3-[2-(trifluoromethyl)thioxanthen-9-ylidene]propyl]piperazin-1-yl]ethanol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1EKL "Create component" 2025-01-22 PDBC A1EKL "Initial release" 2026-03-04 RCSB #