data_A1EKX # _chem_comp.id A1EKX _chem_comp.name "methyl 4-[[2-[4-[bis(fluoranyl)methoxy]-3-(cyclopropen-1-ylmethoxy)phenyl]-6-oxidanyl-1-benzofuran-7-yl]oxy]-1~{H}-pyrrole-2-carboxylate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H19 F2 N O7" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-01-27 _chem_comp.pdbx_modified_date 2025-03-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 483.418 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1EKX _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9LO7 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBC _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1EKX O33 O1 O 0 1 N N N N N N -27.697 -5.034 -32.474 -5.711 3.352 -0.344 O33 A1EKX 1 A1EKX C30 C1 C 0 1 N N N N N N -26.560 -5.387 -32.511 -5.456 2.662 0.625 C30 A1EKX 2 A1EKX O31 O2 O 0 1 N N N N N N -25.819 -5.209 -33.704 -5.825 3.067 1.857 O31 A1EKX 3 A1EKX C32 C2 C 0 1 N N N N N N -26.402 -4.331 -34.648 -6.523 4.337 1.952 C32 A1EKX 4 A1EKX C29 C3 C 0 1 Y N N N N N -25.945 -6.004 -31.366 -4.754 1.388 0.453 C29 A1EKX 5 A1EKX C28 C4 C 0 1 Y N N N N N -24.882 -5.065 -30.676 -4.324 0.849 -0.743 C28 A1EKX 6 A1EKX N34 N1 N 0 1 Y N N N N N -26.990 -6.314 -30.270 -4.398 0.515 1.455 N34 A1EKX 7 A1EKX C35 C5 C 0 1 Y N N N N N -26.473 -5.825 -29.153 -3.763 -0.550 0.899 C35 A1EKX 8 A1EKX C27 C6 C 0 1 Y N N N N N -25.413 -4.652 -29.552 -3.704 -0.371 -0.446 C27 A1EKX 9 A1EKX O26 O3 O 0 1 N N N N N N -26.110 -3.367 -29.712 -3.141 -1.225 -1.346 O26 A1EKX 10 A1EKX C25 C7 C 0 1 Y N N N N N -25.190 -2.258 -29.800 -2.582 -2.371 -0.874 C25 A1EKX 11 A1EKX C2 C8 C 0 1 Y N N N N N -24.946 -1.574 -31.010 -3.348 -3.523 -0.756 C2 A1EKX 12 A1EKX O1 O4 O 0 1 N N N N N N -25.604 -1.946 -32.203 -4.660 -3.500 -1.113 O1 A1EKX 13 A1EKX C6 C9 C 0 1 Y N N N N N -24.497 -1.831 -28.622 -1.237 -2.396 -0.513 C6 A1EKX 14 A1EKX O7 O5 O 0 1 Y N N N N N -24.564 -2.324 -27.374 -0.261 -1.465 -0.520 O7 A1EKX 15 A1EKX C8 C10 C 0 1 Y N N N N N -23.752 -1.687 -26.560 0.899 -1.982 -0.068 C8 A1EKX 16 A1EKX C24 C11 C 0 1 Y N N N N N -23.086 -0.656 -27.262 0.725 -3.286 0.255 C24 A1EKX 17 A1EKX C5 C12 C 0 1 Y N N N N N -23.582 -0.770 -28.651 -0.679 -3.592 -0.028 C5 A1EKX 18 A1EKX C4 C13 C 0 1 Y N N N N N -23.342 -0.088 -29.874 -1.467 -4.739 0.089 C4 A1EKX 19 A1EKX C3 C14 C 0 1 Y N N N N N -24.025 -0.498 -31.044 -2.784 -4.700 -0.275 C3 A1EKX 20 A1EKX C9 C15 C 0 1 Y N N N N N -23.669 -2.031 -25.061 2.170 -1.238 0.055 C9 A1EKX 21 A1EKX C23 C16 C 0 1 Y N N N N N -22.838 -1.366 -24.151 3.312 -1.880 0.536 C23 A1EKX 22 A1EKX C22 C17 C 0 1 Y N N N N N -22.859 -1.736 -22.789 4.498 -1.183 0.650 C22 A1EKX 23 A1EKX C17 C18 C 0 1 Y N N N N N -23.717 -2.753 -22.347 4.558 0.154 0.288 C17 A1EKX 24 A1EKX O18 O6 O 0 1 N N N N N N -23.798 -3.159 -20.990 5.729 0.835 0.403 O18 A1EKX 25 A1EKX F21 F1 F 0 1 N N N N N N -22.799 -1.537 -19.792 6.570 -0.365 2.187 F21 A1EKX 26 A1EKX F20 F2 F 0 1 N N N N N N -21.535 -3.132 -20.727 7.129 -0.968 0.055 F20 A1EKX 27 A1EKX C19 C19 C 0 1 N N N N N N -22.735 -2.853 -20.135 6.855 0.111 0.902 C19 A1EKX 28 A1EKX C11 C20 C 0 1 Y N N N N N -24.560 -3.394 -23.270 3.421 0.800 -0.193 C11 A1EKX 29 A1EKX C10 C21 C 0 1 Y N N N N N -24.538 -3.027 -24.615 2.232 0.107 -0.315 C10 A1EKX 30 A1EKX O12 O7 O 0 1 N N N N N N -25.445 -4.428 -22.870 3.484 2.112 -0.547 O12 A1EKX 31 A1EKX C13 C22 C 0 1 N N N N N N -25.843 -5.227 -23.965 2.280 2.711 -1.032 C13 A1EKX 32 A1EKX C14 C23 C 0 1 N N N N N N -27.218 -5.813 -23.619 2.540 4.156 -1.371 C14 A1EKX 33 A1EKX C16 C24 C 0 1 N N N N N N -28.161 -6.830 -23.722 1.996 5.464 -1.884 C16 A1EKX 34 A1EKX C15 C25 C 0 1 N N N N N N -28.433 -5.694 -22.960 3.395 5.148 -1.421 C15 A1EKX 35 A1EKX H2 H1 H 0 1 N N N N N N -25.753 -4.261 -35.534 -5.887 5.131 1.561 H2 A1EKX 36 A1EKX H1 H2 H 0 1 N N N N N N -27.389 -4.716 -34.946 -7.444 4.290 1.371 H1 A1EKX 37 A1EKX H3 H3 H 0 1 N N N N N N -26.518 -3.334 -34.198 -6.762 4.544 2.995 H3 A1EKX 38 A1EKX H4 H4 H 0 1 N N N N N N -23.904 -4.811 -31.057 -4.443 1.287 -1.724 H4 A1EKX 39 A1EKX H5 H5 H 0 1 N N N N N N -27.867 -6.782 -30.380 -4.570 0.639 2.401 H5 A1EKX 40 A1EKX H6 H6 H 0 1 N N N N N N -26.712 -6.148 -28.150 -3.368 -1.398 1.438 H6 A1EKX 41 A1EKX H7 H7 H 0 1 N N N N N N -25.320 -1.381 -32.912 -4.819 -3.724 -2.040 H7 A1EKX 42 A1EKX H8 H8 H 0 1 N N N N N N -22.374 0.056 -26.871 1.472 -3.963 0.642 H8 A1EKX 43 A1EKX H9 H9 H 0 1 N N N N N N -22.645 0.736 -29.911 -1.035 -5.656 0.461 H9 A1EKX 44 A1EKX H10 H10 H 0 1 N N N N N N -23.841 0.017 -31.976 -3.391 -5.589 -0.189 H10 A1EKX 45 A1EKX H11 H11 H 0 1 N N N N N N -22.185 -0.575 -24.489 3.268 -2.921 0.819 H11 A1EKX 46 A1EKX H12 H12 H 0 1 N N N N N N -22.212 -1.234 -22.085 5.381 -1.681 1.023 H12 A1EKX 47 A1EKX H13 H13 H 0 1 N N N N N N -22.833 -3.464 -19.226 7.722 0.771 0.943 H13 A1EKX 48 A1EKX H14 H14 H 0 1 N N N N N N -25.198 -3.517 -25.316 1.351 0.606 -0.692 H14 A1EKX 49 A1EKX H15 H15 H 0 1 N N N N N N -25.913 -4.613 -24.875 1.946 2.182 -1.924 H15 A1EKX 50 A1EKX H16 H16 H 0 1 N N N N N N -25.117 -6.038 -24.125 1.510 2.651 -0.264 H16 A1EKX 51 A1EKX H18 H17 H 0 1 N N N N N N -28.691 -6.996 -24.672 1.811 5.566 -2.953 H18 A1EKX 52 A1EKX H19 H18 H 0 1 N N N N N N -27.985 -7.796 -23.227 1.356 6.053 -1.226 H19 A1EKX 53 A1EKX H20 H19 H 0 1 N N N N N N -29.101 -5.133 -22.323 4.402 5.497 -1.247 H20 A1EKX 54 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1EKX O33 C30 DOUB N N 1 A1EKX C30 O31 SING N N 2 A1EKX C30 C29 SING N N 3 A1EKX O31 C32 SING N N 4 A1EKX C29 C28 DOUB Y N 5 A1EKX C29 N34 SING Y N 6 A1EKX C28 C27 SING Y N 7 A1EKX N34 C35 SING Y N 8 A1EKX C35 C27 DOUB Y N 9 A1EKX C27 O26 SING N N 10 A1EKX O26 C25 SING N N 11 A1EKX C25 C2 DOUB Y N 12 A1EKX C25 C6 SING Y N 13 A1EKX C2 O1 SING N N 14 A1EKX C2 C3 SING Y N 15 A1EKX C6 O7 SING Y N 16 A1EKX C6 C5 DOUB Y N 17 A1EKX O7 C8 SING Y N 18 A1EKX C8 C24 DOUB Y N 19 A1EKX C8 C9 SING N N 20 A1EKX C24 C5 SING Y N 21 A1EKX C5 C4 SING Y N 22 A1EKX C4 C3 DOUB Y N 23 A1EKX C9 C23 DOUB Y N 24 A1EKX C9 C10 SING Y N 25 A1EKX C23 C22 SING Y N 26 A1EKX C22 C17 DOUB Y N 27 A1EKX C17 O18 SING N N 28 A1EKX C17 C11 SING Y N 29 A1EKX O18 C19 SING N N 30 A1EKX F21 C19 SING N N 31 A1EKX F20 C19 SING N N 32 A1EKX C11 C10 DOUB Y N 33 A1EKX C11 O12 SING N N 34 A1EKX O12 C13 SING N N 35 A1EKX C13 C14 SING N N 36 A1EKX C14 C16 SING N N 37 A1EKX C14 C15 DOUB N N 38 A1EKX C16 C15 SING N N 39 A1EKX C32 H2 SING N N 40 A1EKX C32 H1 SING N N 41 A1EKX C32 H3 SING N N 42 A1EKX C28 H4 SING N N 43 A1EKX N34 H5 SING N N 44 A1EKX C35 H6 SING N N 45 A1EKX O1 H7 SING N N 46 A1EKX C24 H8 SING N N 47 A1EKX C4 H9 SING N N 48 A1EKX C3 H10 SING N N 49 A1EKX C23 H11 SING N N 50 A1EKX C22 H12 SING N N 51 A1EKX C19 H13 SING N N 52 A1EKX C10 H14 SING N N 53 A1EKX C13 H15 SING N N 54 A1EKX C13 H16 SING N N 55 A1EKX C16 H18 SING N N 56 A1EKX C16 H19 SING N N 57 A1EKX C15 H20 SING N N 58 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1EKX InChI InChI 1.06 "InChI=1S/C25H19F2NO7/c1-31-24(30)17-10-16(11-28-17)33-23-18(29)6-4-15-9-20(34-22(15)23)14-5-7-19(35-25(26)27)21(8-14)32-12-13-2-3-13/h2,4-11,25,28-29H,3,12H2,1H3" A1EKX InChIKey InChI 1.06 SVBYCXTUMBVJRN-UHFFFAOYSA-N A1EKX SMILES_CANONICAL CACTVS 3.385 "COC(=O)c1[nH]cc(Oc2c(O)ccc3cc(oc23)c4ccc(OC(F)F)c(OCC5=CC5)c4)c1" A1EKX SMILES CACTVS 3.385 "COC(=O)c1[nH]cc(Oc2c(O)ccc3cc(oc23)c4ccc(OC(F)F)c(OCC5=CC5)c4)c1" A1EKX SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COC(=O)c1cc(c[nH]1)Oc2c(ccc3c2oc(c3)c4ccc(c(c4)OCC5=CC5)OC(F)F)O" A1EKX SMILES "OpenEye OEToolkits" 2.0.7 "COC(=O)c1cc(c[nH]1)Oc2c(ccc3c2oc(c3)c4ccc(c(c4)OCC5=CC5)OC(F)F)O" # _pdbx_chem_comp_identifier.comp_id A1EKX _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "methyl 4-[[2-[4-[bis(fluoranyl)methoxy]-3-(cyclopropen-1-ylmethoxy)phenyl]-6-oxidanyl-1-benzofuran-7-yl]oxy]-1~{H}-pyrrole-2-carboxylate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1EKX "Create component" 2025-01-27 PDBC A1EKX "Initial release" 2025-03-26 RCSB #