data_A1EL5 # _chem_comp.id A1EL5 _chem_comp.name "(R)-N-((S)-4-methoxy-14-methyl-5-oxo-5,7,8,13,13b,14-hexahydroindolo[2',3':3,4]pyrido[2,1-b]quinazolin-11-yl)pyrrolidine-2-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H27 N5 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-02-17 _chem_comp.pdbx_modified_date 2026-02-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 445.514 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1EL5 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9LSS _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBC _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1EL5 C1 C1 C 0 1 Y N N N N N 41.390 -37.942 -26.875 3.205 2.476 0.398 C1 A1EL5 1 A1EL5 C2 C2 C 0 1 Y N N N N N 42.173 -37.264 -25.942 3.653 1.294 -0.183 C2 A1EL5 2 A1EL5 C3 C3 C 0 1 Y N N N N N 42.192 -35.867 -25.927 2.777 0.364 -0.734 C3 A1EL5 3 A1EL5 C4 C4 C 0 1 Y N N N N N 41.385 -35.181 -26.819 1.420 0.668 -0.678 C4 A1EL5 4 A1EL5 C5 C5 C 0 1 Y N N N N N 40.556 -35.855 -27.741 0.972 1.875 -0.082 C5 A1EL5 5 A1EL5 C6 C6 C 0 1 Y N N N N N 40.596 -37.247 -27.767 1.872 2.793 0.469 C6 A1EL5 6 A1EL5 C8 C7 C 0 1 Y N N N N N 40.124 -33.650 -27.873 -0.812 0.721 -0.827 C8 A1EL5 7 A1EL5 C13 C8 C 0 1 N N N N N N 38.307 -33.739 -30.064 -2.778 2.719 -0.480 C13 A1EL5 8 A1EL5 C14 C9 C 0 1 N N N N N N 38.572 -35.024 -29.303 -1.457 2.904 0.276 C14 A1EL5 9 A1EL5 C16 C10 C 0 1 Y N N N N N 39.412 -30.089 -28.951 -3.682 -1.440 -0.365 C16 A1EL5 10 A1EL5 C18 C11 C 0 1 N N N N N N 37.458 -31.535 -29.523 -4.276 0.901 0.100 C18 A1EL5 11 A1EL5 C19 C12 C 0 1 Y N N N N N 39.973 -28.831 -28.763 -4.000 -2.797 -0.319 C19 A1EL5 12 A1EL5 N7 N1 N 0 1 Y N N N N N 41.120 -33.827 -26.936 0.314 -0.005 -1.114 N7 A1EL5 13 A1EL5 C9 C13 C 0 1 Y N N N N N 39.748 -34.859 -28.385 -0.472 1.866 -0.196 C9 A1EL5 14 A1EL5 N10 N2 N 0 1 N N N N N N 42.873 -38.018 -24.963 5.028 1.033 -0.215 N10 A1EL5 15 A1EL5 C11 C14 C 0 1 N N S N N N 39.373 -32.405 -28.299 -2.239 0.347 -1.151 C11 A1EL5 16 A1EL5 N12 N3 N 0 1 N N N N N N 38.210 -32.600 -29.156 -3.131 1.288 -0.493 N12 A1EL5 17 A1EL5 N15 N4 N 0 1 N N N N N N 40.128 -31.253 -28.773 -2.480 -1.049 -0.902 N15 A1EL5 18 A1EL5 C17 C15 C 0 1 Y N N N N N 38.049 -30.207 -29.278 -4.605 -0.514 0.143 C17 A1EL5 19 A1EL5 C20 C16 C 0 1 Y N N N N N 39.180 -27.698 -28.867 -5.199 -3.217 0.221 C20 A1EL5 20 A1EL5 C21 C17 C 0 1 Y N N N N N 37.823 -27.800 -29.131 -6.107 -2.304 0.726 C21 A1EL5 21 A1EL5 C22 C18 C 0 1 Y N N N N N 37.253 -29.049 -29.319 -5.817 -0.948 0.692 C22 A1EL5 22 A1EL5 O23 O1 O 0 1 N N N N N N 36.425 -31.674 -30.142 -5.027 1.727 0.583 O23 A1EL5 23 A1EL5 O24 O2 O 0 1 N N N N N N 35.908 -29.257 -29.439 -6.698 -0.049 1.196 O24 A1EL5 24 A1EL5 C25 C19 C 0 1 N N N N N N 35.056 -28.113 -29.363 -7.914 -0.566 1.739 C25 A1EL5 25 A1EL5 C26 C20 C 0 1 N N N N N N 41.533 -31.231 -28.409 -2.141 -1.859 -2.079 C26 A1EL5 26 A1EL5 C27 C21 C 0 1 N N N N N N 43.932 -37.624 -24.206 5.477 -0.231 -0.078 C27 A1EL5 27 A1EL5 C28 C22 C 0 1 N N R N N N 44.285 -38.562 -23.052 6.958 -0.501 -0.010 C28 A1EL5 28 A1EL5 C29 C23 C 0 1 N N N N N N 44.682 -39.949 -23.574 7.479 -0.287 1.433 C29 A1EL5 29 A1EL5 C30 C24 C 0 1 N N N N N N 46.213 -39.875 -23.739 8.751 -1.176 1.442 C30 A1EL5 30 A1EL5 C31 C25 C 0 1 N N N N N N 46.637 -38.562 -23.077 8.344 -2.373 0.557 C31 A1EL5 31 A1EL5 N32 N5 N 0 1 N N N N N N 45.467 -38.086 -22.316 7.236 -1.923 -0.305 N32 A1EL5 32 A1EL5 O33 O3 O 0 1 N N N N N N 44.568 -36.582 -24.380 4.689 -1.151 -0.009 O33 A1EL5 33 A1EL5 H1 H1 H 0 1 N N N N N N 41.404 -39.022 -26.901 3.929 3.163 0.810 H1 A1EL5 34 A1EL5 H2 H2 H 0 1 N N N N N N 42.824 -35.333 -25.233 3.134 -0.551 -1.183 H2 A1EL5 35 A1EL5 H3 H3 H 0 1 N N N N N N 40.002 -37.787 -28.490 1.534 3.712 0.923 H3 A1EL5 36 A1EL5 H4 H4 H 0 1 N N N N N N 39.131 -33.565 -30.772 -3.565 3.284 0.019 H4 A1EL5 37 A1EL5 H5 H5 H 0 1 N N N N N N 37.362 -33.838 -30.618 -2.665 3.076 -1.503 H5 A1EL5 38 A1EL5 H6 H6 H 0 1 N N N N N N 37.683 -35.283 -28.709 -1.061 3.900 0.079 H6 A1EL5 39 A1EL5 H7 H7 H 0 1 N N N N N N 38.783 -35.832 -30.019 -1.629 2.784 1.346 H7 A1EL5 40 A1EL5 H8 H8 H 0 1 N N N N N N 41.025 -28.736 -28.536 -3.304 -3.524 -0.708 H8 A1EL5 41 A1EL5 H9 H9 H 0 1 N N N N N N 41.576 -33.098 -26.425 0.324 -0.866 -1.560 H9 A1EL5 42 A1EL5 H10 H10 H 0 1 N N N N N N 42.548 -38.952 -24.812 5.657 1.760 -0.336 H10 A1EL5 43 A1EL5 H11 H11 H 0 1 N N N N N N 38.935 -32.050 -27.355 -2.361 0.499 -2.223 H11 A1EL5 44 A1EL5 H12 H12 H 0 1 N N N N N N 39.626 -26.723 -28.741 -5.430 -4.271 0.249 H12 A1EL5 45 A1EL5 H13 H13 H 0 1 N N N N N N 37.213 -26.911 -29.190 -7.041 -2.647 1.146 H13 A1EL5 46 A1EL5 H14 H14 H 0 1 N N N N N N 34.008 -28.428 -29.475 -8.458 -1.105 0.964 H14 A1EL5 47 A1EL5 H15 H15 H 0 1 N N N N N N 35.189 -27.621 -28.388 -7.686 -1.245 2.561 H15 A1EL5 48 A1EL5 H16 H16 H 0 1 N N N N N N 35.315 -27.409 -30.168 -8.527 0.257 2.107 H16 A1EL5 49 A1EL5 H17 H17 H 0 1 N N N N N N 41.905 -32.262 -28.319 -2.879 -1.690 -2.863 H17 A1EL5 50 A1EL5 H18 H18 H 0 1 N N N N N N 42.105 -30.701 -29.185 -1.153 -1.576 -2.443 H18 A1EL5 51 A1EL5 H19 H19 H 0 1 N N N N N N 41.654 -30.712 -27.447 -2.138 -2.914 -1.805 H19 A1EL5 52 A1EL5 H20 H20 H 0 1 N N N N N N 43.423 -38.656 -22.375 7.493 0.143 -0.708 H20 A1EL5 53 A1EL5 H21 H21 H 0 1 N N N N N N 44.196 -40.155 -24.539 7.733 0.759 1.606 H21 A1EL5 54 A1EL5 H22 H22 H 0 1 N N N N N N 44.406 -40.730 -22.851 6.753 -0.637 2.167 H22 A1EL5 55 A1EL5 H23 H23 H 0 1 N N N N N N 46.694 -40.729 -23.240 9.596 -0.643 1.005 H23 A1EL5 56 A1EL5 H24 H24 H 0 1 N N N N N N 46.484 -39.872 -24.805 8.983 -1.506 2.454 H24 A1EL5 57 A1EL5 H25 H25 H 0 1 N N N N N N 47.487 -38.734 -22.401 9.189 -2.684 -0.058 H25 A1EL5 58 A1EL5 H26 H26 H 0 1 N N N N N N 46.920 -37.824 -23.842 8.014 -3.201 1.183 H26 A1EL5 59 A1EL5 H27 H27 H 0 1 N N N N N N 45.476 -38.465 -21.391 7.460 -2.052 -1.280 H27 A1EL5 60 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1EL5 O23 C18 DOUB N N 1 A1EL5 C13 C14 SING N N 2 A1EL5 C13 N12 SING N N 3 A1EL5 C18 C17 SING N N 4 A1EL5 C18 N12 SING N N 5 A1EL5 O24 C25 SING N N 6 A1EL5 O24 C22 SING N N 7 A1EL5 C22 C17 DOUB Y N 8 A1EL5 C22 C21 SING Y N 9 A1EL5 C14 C9 SING N N 10 A1EL5 C17 C16 SING Y N 11 A1EL5 N12 C11 SING N N 12 A1EL5 C21 C20 DOUB Y N 13 A1EL5 C16 N15 SING N N 14 A1EL5 C16 C19 DOUB Y N 15 A1EL5 C20 C19 SING Y N 16 A1EL5 N15 C26 SING N N 17 A1EL5 N15 C11 SING N N 18 A1EL5 C9 C8 DOUB Y N 19 A1EL5 C9 C5 SING Y N 20 A1EL5 C11 C8 SING N N 21 A1EL5 C8 N7 SING Y N 22 A1EL5 C6 C5 DOUB Y N 23 A1EL5 C6 C1 SING Y N 24 A1EL5 C5 C4 SING Y N 25 A1EL5 N7 C4 SING Y N 26 A1EL5 C1 C2 DOUB Y N 27 A1EL5 C4 C3 DOUB Y N 28 A1EL5 C2 C3 SING Y N 29 A1EL5 C2 N10 SING N N 30 A1EL5 N10 C27 SING N N 31 A1EL5 O33 C27 DOUB N N 32 A1EL5 C27 C28 SING N N 33 A1EL5 C30 C29 SING N N 34 A1EL5 C30 C31 SING N N 35 A1EL5 C29 C28 SING N N 36 A1EL5 C31 N32 SING N N 37 A1EL5 C28 N32 SING N N 38 A1EL5 C1 H1 SING N N 39 A1EL5 C3 H2 SING N N 40 A1EL5 C6 H3 SING N N 41 A1EL5 C13 H4 SING N N 42 A1EL5 C13 H5 SING N N 43 A1EL5 C14 H6 SING N N 44 A1EL5 C14 H7 SING N N 45 A1EL5 C19 H8 SING N N 46 A1EL5 N7 H9 SING N N 47 A1EL5 N10 H10 SING N N 48 A1EL5 C11 H11 SING N N 49 A1EL5 C20 H12 SING N N 50 A1EL5 C21 H13 SING N N 51 A1EL5 C25 H14 SING N N 52 A1EL5 C25 H15 SING N N 53 A1EL5 C25 H16 SING N N 54 A1EL5 C26 H17 SING N N 55 A1EL5 C26 H18 SING N N 56 A1EL5 C26 H19 SING N N 57 A1EL5 C28 H20 SING N N 58 A1EL5 C29 H21 SING N N 59 A1EL5 C29 H22 SING N N 60 A1EL5 C30 H23 SING N N 61 A1EL5 C30 H24 SING N N 62 A1EL5 C31 H25 SING N N 63 A1EL5 C31 H26 SING N N 64 A1EL5 N32 H27 SING N N 65 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1EL5 InChI InChI 1.06 "InChI=1S/C25H27N5O3/c1-29-19-6-3-7-20(33-2)21(19)25(32)30-12-10-16-15-9-8-14(13-18(15)28-22(16)24(29)30)27-23(31)17-5-4-11-26-17/h3,6-9,13,17,24,26,28H,4-5,10-12H2,1-2H3,(H,27,31)/t17-,24+/m1/s1" A1EL5 InChIKey InChI 1.06 AQFIRGPZQUJRJS-OSPHWJPCSA-N A1EL5 SMILES_CANONICAL CACTVS 3.385 "COc1cccc2N(C)[C@H]3N(CCc4c3[nH]c5cc(NC(=O)[C@H]6CCCN6)ccc45)C(=O)c12" A1EL5 SMILES CACTVS 3.385 "COc1cccc2N(C)[CH]3N(CCc4c3[nH]c5cc(NC(=O)[CH]6CCCN6)ccc45)C(=O)c12" A1EL5 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN1c2cccc(c2C(=O)N3[C@H]1c4c(c5ccc(cc5[nH]4)NC(=O)[C@H]6CCCN6)CC3)OC" A1EL5 SMILES "OpenEye OEToolkits" 2.0.7 "CN1c2cccc(c2C(=O)N3C1c4c(c5ccc(cc5[nH]4)NC(=O)C6CCCN6)CC3)OC" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1EL5 "Create component" 2025-02-17 PDBC A1EL5 "Initial release" 2026-02-18 RCSB #