data_A1ELU # _chem_comp.id A1ELU _chem_comp.name "methyl (1~{R},4~{a}~{S},6~{S},7~{R},7~{a}~{S})-7-methyl-1,6-bis(oxidanyl)-1,4~{a},5,6,7,7~{a}-hexahydrocyclopenta[c]pyran-4-carboxylate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C11 H16 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms Loganetin _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-02-08 _chem_comp.pdbx_modified_date 2026-01-09 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 228.242 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1ELU _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9LFS _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBC _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1ELU C11 C1 C 0 1 N N S N N N -57.396 -24.410 -16.545 1.468 -0.326 -0.619 C11 A1ELU 1 A1ELU C12 C2 C 0 1 N N S N N N -57.928 -23.138 -15.783 0.010 0.134 -0.818 C12 A1ELU 2 A1ELU C13 C3 C 0 1 N N R N N N -55.844 -24.302 -16.544 1.929 0.468 0.623 C13 A1ELU 3 A1ELU C14 C4 C 0 1 N N S N N N -55.570 -22.802 -16.341 1.250 1.845 0.466 C14 A1ELU 4 A1ELU C15 C5 C 0 1 N N N N N N -56.676 -22.342 -15.373 0.030 1.633 -0.446 C15 A1ELU 5 A1ELU C16 C6 C 0 1 N N R N N N -57.892 -25.781 -16.001 1.512 -1.822 -0.328 C16 A1ELU 6 A1ELU C17 C7 C 0 1 N N N N N N -58.820 -23.501 -14.642 -0.905 -0.583 0.132 C17 A1ELU 7 A1ELU C18 C8 C 0 1 N N N N N N -55.172 -24.835 -17.789 3.452 0.619 0.627 C18 A1ELU 8 A1ELU C20 C10 C 0 1 N N N N N N -59.369 -24.718 -14.528 -0.526 -1.615 0.886 C20 A1ELU 9 A1ELU C25 C15 C 0 1 N N N N N N -58.753 -22.735 -13.392 -2.245 -0.138 0.232 C25 A1ELU 10 A1ELU C27 C17 C 0 1 N N N N N N -60.871 -21.975 -12.691 -4.032 1.299 -0.361 C27 A1ELU 11 A1ELU O1 O1 O 0 1 N N N N N N -58.749 -26.330 -16.947 0.972 -2.540 -1.439 O1 A1ELU 12 A1ELU O02 O2 O 0 1 N N N N N N -58.691 -25.814 -14.863 0.726 -2.105 0.860 O02 A1ELU 13 A1ELU O03 O3 O 0 1 N N N N N N -55.722 -22.138 -17.574 2.156 2.772 -0.137 O03 A1ELU 14 A1ELU O07 O7 O 0 1 N N N N N N -59.629 -21.694 -13.311 -2.668 0.904 -0.514 O07 A1ELU 15 A1ELU O09 O9 O 0 1 N N N N N N -58.001 -22.970 -12.454 -3.015 -0.695 0.992 O09 A1ELU 16 A1ELU H111 H1 H 0 0 N N N N N N -57.732 -24.328 -17.589 2.076 -0.075 -1.489 H111 A1ELU 17 A1ELU H121 H2 H 0 0 N N N N N N -58.500 -22.532 -16.501 -0.304 -0.007 -1.852 H121 A1ELU 18 A1ELU H131 H3 H 0 0 N N N N N N -55.460 -24.849 -15.670 1.591 -0.022 1.536 H131 A1ELU 19 A1ELU H141 H4 H 0 0 N N N N N N -54.576 -22.646 -15.896 0.929 2.216 1.439 H141 A1ELU 20 A1ELU H151 H5 H 0 0 N N N N N N -56.855 -21.262 -15.477 0.126 2.239 -1.346 H151 A1ELU 21 A1ELU H152 H6 H 0 0 N N N N N N -56.398 -22.569 -14.333 -0.884 1.897 0.086 H152 A1ELU 22 A1ELU H161 H7 H 0 0 N N N N N N -57.013 -26.429 -15.865 2.544 -2.130 -0.162 H161 A1ELU 23 A1ELU H182 H8 H 0 0 N N N N N N -54.082 -24.717 -17.697 3.766 1.152 -0.271 H182 A1ELU 24 A1ELU H183 H9 H 0 0 N N N N N N -55.416 -25.901 -17.910 3.759 1.181 1.509 H183 A1ELU 25 A1ELU H181 H10 H 0 0 N N N N N N -55.529 -24.275 -18.666 3.915 -0.367 0.645 H181 A1ELU 26 A1ELU H201 H12 H 0 0 N N N N N N -60.379 -24.812 -14.158 -1.251 -2.075 1.541 H201 A1ELU 27 A1ELU H272 H19 H 0 0 N N N N N N -61.491 -21.067 -12.683 -4.684 0.467 -0.625 H272 A1ELU 28 A1ELU H271 H20 H 0 0 N N N N N N -61.389 -22.768 -13.251 -4.213 1.588 0.674 H271 A1ELU 29 A1ELU H273 H21 H 0 0 N N N N N N -60.697 -22.309 -11.658 -4.241 2.146 -1.016 H273 A1ELU 30 A1ELU H031 H22 H 0 0 N N N N N N -55.554 -21.210 -17.457 1.788 3.657 -0.262 H031 A1ELU 31 A1ELU H2 H16 H 0 1 N Y N N N N -58.311 -26.364 -17.790 0.968 -3.500 -1.323 H2 A1ELU 32 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1ELU O1 C16 SING N N 1 A1ELU O02 C16 SING N N 2 A1ELU O02 C20 SING N N 3 A1ELU O03 C14 SING N N 4 A1ELU O07 C25 SING N N 5 A1ELU O07 C27 SING N N 6 A1ELU O09 C25 DOUB N N 7 A1ELU C11 C12 SING N N 8 A1ELU C11 C13 SING N N 9 A1ELU C11 C16 SING N N 10 A1ELU C12 C15 SING N N 11 A1ELU C12 C17 SING N N 12 A1ELU C13 C14 SING N N 13 A1ELU C13 C18 SING N N 14 A1ELU C14 C15 SING N N 15 A1ELU C17 C20 DOUB N N 16 A1ELU C17 C25 SING N N 17 A1ELU C11 H111 SING N N 18 A1ELU C12 H121 SING N N 19 A1ELU C13 H131 SING N N 20 A1ELU C14 H141 SING N N 21 A1ELU C15 H151 SING N N 22 A1ELU C15 H152 SING N N 23 A1ELU C16 H161 SING N N 24 A1ELU C18 H182 SING N N 25 A1ELU C18 H183 SING N N 26 A1ELU C18 H181 SING N N 27 A1ELU C20 H201 SING N N 28 A1ELU C27 H272 SING N N 29 A1ELU C27 H271 SING N N 30 A1ELU C27 H273 SING N N 31 A1ELU O03 H031 SING N N 32 A1ELU O1 H2 SING N N 33 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1ELU InChI InChI 1.06 "InChI=1S/C11H16O5/c1-5-8(12)3-6-7(10(13)15-2)4-16-11(14)9(5)6/h4-6,8-9,11-12,14H,3H2,1-2H3/t5-,6+,8-,9+,11+/m0/s1" A1ELU InChIKey InChI 1.06 XWOHZIIPBYAMJX-KHBMLBSESA-N A1ELU SMILES_CANONICAL CACTVS 3.385 "COC(=O)C1=CO[C@@H](O)[C@@H]2[C@@H](C)[C@@H](O)C[C@H]12" A1ELU SMILES CACTVS 3.385 "COC(=O)C1=CO[CH](O)[CH]2[CH](C)[CH](O)C[CH]12" A1ELU SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H]1[C@H](C[C@H]2[C@@H]1[C@@H](OC=C2C(=O)OC)O)O" A1ELU SMILES "OpenEye OEToolkits" 2.0.7 "CC1C(CC2C1C(OC=C2C(=O)OC)O)O" # _pdbx_chem_comp_identifier.comp_id A1ELU _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "methyl (1~{R},4~{a}~{S},6~{S},7~{R},7~{a}~{S})-7-methyl-1,6-bis(oxidanyl)-1,4~{a},5,6,7,7~{a}-hexahydrocyclopenta[c]pyran-4-carboxylate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1ELU "Create component" 2025-02-08 PDBC A1ELU "Initial release" 2026-01-14 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id A1ELU _pdbx_chem_comp_synonyms.name Loganetin _pdbx_chem_comp_synonyms.provenance PUBCHEM _pdbx_chem_comp_synonyms.type ? #