data_A1EMZ # _chem_comp.id A1EMZ _chem_comp.name "(1Z,4R,12S,14S,17Z)-12-hydroxy-19,19-dimethyl-5-(2-methylbut-3-en-2-yl)-3,5,16,21-tetrazaheptacyclo[14.13.0.03,14.04,12.06,11.020,28.022,27]nonacosa-1(29),6,8,10,17,20(28),22,24,26-nonaene-2,15-dione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C32 H32 N4 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-03-12 _chem_comp.pdbx_modified_date 2026-02-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 520.621 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1EMZ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9M2L _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBC _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1EMZ C2 C1 C 0 1 N N N N N N -9.779 -37.934 24.826 -0.047 1.136 -0.169 C2 A1EMZ 1 A1EMZ C4 C2 C 0 1 N N S N N N -10.885 -39.102 26.649 -0.715 -1.067 0.733 C4 A1EMZ 2 A1EMZ C5 C3 C 0 1 N N N N N N -10.743 -39.063 28.172 -2.074 -1.713 1.031 C5 A1EMZ 3 A1EMZ C6 C4 C 0 1 N N S N N N -10.114 -37.696 28.470 -2.854 -0.529 1.669 C6 A1EMZ 4 A1EMZ C8 C5 C 0 1 N N R N N N -9.208 -37.420 27.240 -2.362 0.686 0.809 C8 A1EMZ 5 A1EMZ C10 C6 C 0 1 N N N N N N -8.117 -35.048 26.997 -3.451 1.919 -0.987 C10 A1EMZ 6 A1EMZ C11 C7 C 0 1 N N N N N N -6.952 -35.807 26.371 -2.108 2.438 -1.505 C11 A1EMZ 7 A1EMZ C12 C8 C 0 1 N N N N N N -7.694 -34.501 28.357 -4.005 2.893 0.055 C12 A1EMZ 8 A1EMZ C13 C9 C 0 1 N N N N N N -8.403 -33.868 26.099 -4.422 1.805 -2.134 C13 A1EMZ 9 A1EMZ C14 C10 C 0 1 N N N N N N -8.414 -32.615 26.459 -4.478 0.700 -2.836 C14 A1EMZ 10 A1EMZ C15 C11 C 0 1 Y N N N N N -10.534 -35.554 27.556 -4.497 0.054 0.095 C15 A1EMZ 11 A1EMZ C16 C12 C 0 1 Y N N N N N -11.060 -36.524 28.394 -4.306 -0.629 1.302 C16 A1EMZ 12 A1EMZ C17 C13 C 0 1 Y N N N N N -12.305 -36.344 28.969 -5.346 -1.254 1.961 C17 A1EMZ 13 A1EMZ C18 C14 C 0 1 Y N N N N N -13.028 -35.205 28.662 -6.605 -1.180 1.374 C18 A1EMZ 14 A1EMZ C19 C15 C 0 1 Y N N N N N -12.509 -34.250 27.806 -6.803 -0.512 0.184 C19 A1EMZ 15 A1EMZ C20 C16 C 0 1 Y N N N N N -11.259 -34.416 27.234 -5.766 0.120 -0.482 C20 A1EMZ 16 A1EMZ C21 C17 C 0 1 N N N N N N -12.223 -38.681 26.085 -0.039 -1.668 -0.478 C21 A1EMZ 17 A1EMZ C23 C18 C 0 1 N N N N N N -13.339 -37.775 24.288 1.612 -1.322 -2.175 C23 A1EMZ 18 A1EMZ C24 C19 C 0 1 N N N N N N -14.091 -38.425 23.415 2.780 -1.923 -2.036 C24 A1EMZ 19 A1EMZ C25 C20 C 0 1 N N N N N N -13.849 -39.679 22.599 3.329 -2.113 -0.650 C25 A1EMZ 20 A1EMZ C26 C21 C 0 1 N N N N N N -13.515 -40.881 23.497 2.172 -2.275 0.337 C26 A1EMZ 21 A1EMZ C27 C22 C 0 1 N N N N N N -15.152 -40.097 21.902 4.203 -3.368 -0.618 C27 A1EMZ 22 A1EMZ C28 C23 C 0 1 N N N N N N -10.989 -38.224 24.061 1.198 0.346 -0.442 C28 A1EMZ 23 A1EMZ C29 C24 C 0 1 N N N N N N -10.720 -38.496 22.794 2.358 0.872 -0.125 C29 A1EMZ 24 A1EMZ C30 C25 C 0 1 Y N N N N N -11.462 -38.930 21.649 3.703 0.345 -0.026 C30 A1EMZ 25 A1EMZ C31 C26 C 0 1 Y N N N N N -12.770 -39.421 21.566 4.158 -0.921 -0.256 C31 A1EMZ 26 A1EMZ C33 C27 C 0 1 Y N N N N N -11.967 -39.363 19.463 5.977 0.238 0.366 C33 A1EMZ 27 A1EMZ C34 C28 C 0 1 Y N N N N N -10.941 -38.895 20.302 4.878 1.124 0.396 C34 A1EMZ 28 A1EMZ C35 C29 C 0 1 Y N N N N N -9.740 -38.502 19.724 5.022 2.456 0.780 C35 A1EMZ 29 A1EMZ C36 C30 C 0 1 Y N N N N N -9.587 -38.554 18.347 6.296 2.863 1.147 C36 A1EMZ 30 A1EMZ C37 C31 C 0 1 Y N N N N N -10.608 -39.018 17.538 7.373 1.991 1.129 C37 A1EMZ 31 A1EMZ C38 C32 C 0 1 Y N N N N N -11.812 -39.427 18.085 7.250 0.669 0.736 C38 A1EMZ 32 A1EMZ O1 O1 O 0 1 N N N N N N -8.738 -37.573 24.306 -0.193 2.313 -0.442 O1 A1EMZ 33 A1EMZ O7 O2 O 0 1 N N N N N N -9.363 -37.715 29.682 -2.625 -0.381 3.072 O7 A1EMZ 34 A1EMZ N22 N1 N 0 1 N N N N N N -12.177 -38.206 24.777 0.945 -0.903 -1.031 N22 A1EMZ 35 A1EMZ N3 N2 N 0 1 N N N N N N -9.900 -38.138 26.165 -0.996 0.355 0.423 N3 A1EMZ 36 A1EMZ N32 N3 N 0 1 Y N N N N N -13.056 -39.683 20.247 5.510 -0.971 -0.055 N32 A1EMZ 37 A1EMZ N9 N4 N 0 1 N N N N N N -9.240 -35.955 27.176 -3.261 0.599 -0.371 N9 A1EMZ 38 A1EMZ O39 O3 O 0 1 N N N N N N -13.252 -38.723 26.729 -0.348 -2.753 -0.924 O39 A1EMZ 39 A1EMZ H4 H1 H 0 1 N N N N N N -10.637 -40.111 26.288 -0.064 -1.150 1.603 H4 A1EMZ 40 A1EMZ H5B H2 H 0 1 N N N N N N -11.727 -39.151 28.656 -2.556 -2.049 0.113 H5B A1EMZ 41 A1EMZ H5A H3 H 0 1 N N N N N N -10.089 -39.875 28.521 -1.968 -2.536 1.738 H5A A1EMZ 42 A1EMZ H8 H4 H 0 1 N N N N N N -8.191 -37.805 27.408 -2.442 1.638 1.332 H8 A1EMZ 43 A1EMZ H11C H5 H 0 0 N N N N N N -6.100 -35.124 26.234 -1.653 3.084 -0.755 H11C A1EMZ 44 A1EMZ H11A H6 H 0 0 N N N N N N -6.656 -36.634 27.033 -1.447 1.595 -1.707 H11A A1EMZ 45 A1EMZ H11B H7 H 0 0 N N N N N N -7.259 -36.210 25.395 -2.267 3.003 -2.424 H11B A1EMZ 46 A1EMZ H12C H8 H 0 0 N N N N N N -6.845 -33.814 28.228 -4.166 3.867 -0.407 H12C A1EMZ 47 A1EMZ H12B H9 H 0 0 N N N N N N -8.537 -33.961 28.813 -4.951 2.513 0.440 H12B A1EMZ 48 A1EMZ H12A H10 H 0 0 N N N N N N -7.396 -35.334 29.011 -3.293 2.993 0.874 H12A A1EMZ 49 A1EMZ H13 H11 H 0 1 N N N N N N -8.618 -34.082 25.063 -5.070 2.633 -2.377 H13 A1EMZ 50 A1EMZ H14B H12 H 0 0 N N N N N N -8.632 -31.846 25.732 -5.167 0.622 -3.664 H14B A1EMZ 51 A1EMZ H14A H13 H 0 0 N N N N N N -8.205 -32.346 27.484 -3.837 -0.132 -2.586 H14A A1EMZ 52 A1EMZ H17 H14 H 0 1 N N N N N N -12.707 -37.082 29.648 -5.190 -1.778 2.892 H17 A1EMZ 53 A1EMZ H18 H15 H 0 1 N N N N N N -14.007 -35.060 29.095 -7.444 -1.656 1.859 H18 A1EMZ 54 A1EMZ H19 H16 H 0 1 N N N N N N -13.086 -33.365 27.581 -7.795 -0.480 -0.241 H19 A1EMZ 55 A1EMZ H20 H17 H 0 1 N N N N N N -10.859 -33.678 26.554 -5.933 0.643 -1.412 H20 A1EMZ 56 A1EMZ H23 H18 H 0 1 N N N N N N -13.696 -36.816 24.633 1.186 -1.160 -3.155 H23 A1EMZ 57 A1EMZ H24 H19 H 0 1 N N N N N N -15.061 -37.977 23.253 3.328 -2.270 -2.899 H24 A1EMZ 58 A1EMZ H26C H20 H 0 0 N N N N N N -13.346 -41.770 22.872 1.407 -2.915 -0.102 H26C A1EMZ 59 A1EMZ H26A H21 H 0 0 N N N N N N -12.607 -40.663 24.078 2.540 -2.729 1.257 H26A A1EMZ 60 A1EMZ H26B H22 H 0 0 N N N N N N -14.353 -41.069 24.184 1.744 -1.298 0.560 H26B A1EMZ 61 A1EMZ H27C H23 H 0 0 N N N N N N -14.976 -41.007 21.310 5.026 -3.256 -1.324 H27C A1EMZ 62 A1EMZ H27B H24 H 0 0 N N N N N N -15.925 -40.296 22.659 4.603 -3.508 0.386 H27B A1EMZ 63 A1EMZ H27A H25 H 0 0 N N N N N N -15.489 -39.287 21.238 3.604 -4.236 -0.895 H27A A1EMZ 64 A1EMZ H29 H26 H 0 1 N N N N N N -9.674 -38.354 22.566 2.296 1.924 0.113 H29 A1EMZ 65 A1EMZ H35 H27 H 0 1 N N N N N N -8.927 -38.157 20.346 4.184 3.137 0.792 H35 A1EMZ 66 A1EMZ H36 H28 H 0 1 N N N N N N -8.659 -38.228 17.901 6.453 3.886 1.454 H36 A1EMZ 67 A1EMZ H37 H29 H 0 1 N N N N N N -10.465 -39.062 16.468 8.343 2.356 1.432 H37 A1EMZ 68 A1EMZ H38 H30 H 0 1 N N N N N N -12.612 -39.787 17.455 8.100 0.003 0.717 H38 A1EMZ 69 A1EMZ H7 H31 H 0 1 N N N N N N -8.988 -36.856 29.836 -2.892 -1.147 3.597 H7 A1EMZ 70 A1EMZ H32 H32 H 0 1 N N N N N N -13.922 -40.050 19.907 6.061 -1.758 -0.192 H32 A1EMZ 71 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1EMZ O1 C2 DOUB N N 1 A1EMZ C2 N3 SING N N 2 A1EMZ N3 C4 SING N N 3 A1EMZ C4 C5 SING N N 4 A1EMZ C5 C6 SING N N 5 A1EMZ C6 O7 SING N N 6 A1EMZ C6 C8 SING N N 7 A1EMZ C8 N9 SING N N 8 A1EMZ N9 C10 SING N N 9 A1EMZ C10 C11 SING N N 10 A1EMZ C10 C12 SING N N 11 A1EMZ C10 C13 SING N N 12 A1EMZ C13 C14 DOUB N N 13 A1EMZ N9 C15 SING N N 14 A1EMZ C15 C16 DOUB Y N 15 A1EMZ C16 C17 SING Y N 16 A1EMZ C17 C18 DOUB Y N 17 A1EMZ C18 C19 SING Y N 18 A1EMZ C19 C20 DOUB Y N 19 A1EMZ C4 C21 SING N N 20 A1EMZ C21 N22 SING N N 21 A1EMZ N22 C23 SING N N 22 A1EMZ C23 C24 DOUB N Z 23 A1EMZ C24 C25 SING N N 24 A1EMZ C25 C26 SING N N 25 A1EMZ C25 C27 SING N N 26 A1EMZ N22 C28 SING N N 27 A1EMZ C28 C29 DOUB N Z 28 A1EMZ C29 C30 SING N N 29 A1EMZ C30 C31 DOUB Y N 30 A1EMZ C31 N32 SING Y N 31 A1EMZ N32 C33 SING Y N 32 A1EMZ C33 C34 DOUB Y N 33 A1EMZ C34 C35 SING Y N 34 A1EMZ C35 C36 DOUB Y N 35 A1EMZ C36 C37 SING Y N 36 A1EMZ C37 C38 DOUB Y N 37 A1EMZ C21 O39 DOUB N N 38 A1EMZ C28 C2 SING N N 39 A1EMZ C8 N3 SING N N 40 A1EMZ C16 C6 SING N N 41 A1EMZ C20 C15 SING Y N 42 A1EMZ C31 C25 SING N N 43 A1EMZ C34 C30 SING Y N 44 A1EMZ C38 C33 SING Y N 45 A1EMZ C4 H4 SING N N 46 A1EMZ C5 H5B SING N N 47 A1EMZ C5 H5A SING N N 48 A1EMZ C8 H8 SING N N 49 A1EMZ C11 H11C SING N N 50 A1EMZ C11 H11A SING N N 51 A1EMZ C11 H11B SING N N 52 A1EMZ C12 H12C SING N N 53 A1EMZ C12 H12B SING N N 54 A1EMZ C12 H12A SING N N 55 A1EMZ C13 H13 SING N N 56 A1EMZ C14 H14B SING N N 57 A1EMZ C14 H14A SING N N 58 A1EMZ C17 H17 SING N N 59 A1EMZ C18 H18 SING N N 60 A1EMZ C19 H19 SING N N 61 A1EMZ C20 H20 SING N N 62 A1EMZ C23 H23 SING N N 63 A1EMZ C24 H24 SING N N 64 A1EMZ C26 H26C SING N N 65 A1EMZ C26 H26A SING N N 66 A1EMZ C26 H26B SING N N 67 A1EMZ C27 H27C SING N N 68 A1EMZ C27 H27B SING N N 69 A1EMZ C27 H27A SING N N 70 A1EMZ C29 H29 SING N N 71 A1EMZ C35 H35 SING N N 72 A1EMZ C36 H36 SING N N 73 A1EMZ C37 H37 SING N N 74 A1EMZ C38 H38 SING N N 75 A1EMZ O7 H7 SING N N 76 A1EMZ N32 H32 SING N N 77 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1EMZ InChI InChI 1.06 "InChI=1S/C32H32N4O3/c1-6-31(4,5)36-23-14-10-8-12-21(23)32(39)18-25-27(37)34-16-15-30(2,3)26-20(19-11-7-9-13-22(19)33-26)17-24(34)28(38)35(25)29(32)36/h6-17,25,29,33,39H,1,18H2,2-5H3/t25-,29+,32+/m1/s1" A1EMZ InChIKey InChI 1.06 XOYCJCSLHCTYSV-ISXOHIFFSA-N A1EMZ SMILES_CANONICAL CACTVS 3.385 "CC(C)(C=C)N1[C@@H]2N3[C@@H](C[C@]2(O)c4ccccc14)C(=O)N5\C=C/C(C)(C)c6[nH]c7ccccc7c6/C=C5/C3=O" A1EMZ SMILES CACTVS 3.385 "CC(C)(C=C)N1[CH]2N3[CH](C[C]2(O)c4ccccc14)C(=O)N5C=CC(C)(C)c6[nH]c7ccccc7c6C=C5C3=O" A1EMZ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1(/C=C\N2/C(=C\c3c1[nH]c4c3cccc4)/C(=O)N5[C@H](C2=O)C[C@]6([C@@H]5N(c7c6cccc7)C(C)(C)C=C)O)C" A1EMZ SMILES "OpenEye OEToolkits" 2.0.7 "CC1(C=CN2C(=Cc3c1[nH]c4c3cccc4)C(=O)N5C(C2=O)CC6(C5N(c7c6cccc7)C(C)(C)C=C)O)C" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1EMZ "Create component" 2025-03-12 PDBC A1EMZ "Initial release" 2026-03-04 RCSB #