data_A1EOB # _chem_comp.id A1EOB _chem_comp.name "2-(4-methyl-1,4-diazepan-1-yl)-~{N}-[(5-methylpyrazin-2-yl)methyl]-5-oxidanylidene-[1,3]benzothiazolo[3,2-a][1,8]naphthyridine-6-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H27 N7 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-03-28 _chem_comp.pdbx_modified_date 2026-06-19 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 513.614 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9U52 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBC _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1EOB C21 C1 C 0 1 N N N N N N 164.198 20.258 -101.287 8.948 3.377 0.264 C21 A1EOB 1 A1EOB C19 C2 C 0 1 Y N N N N N 163.961 19.938 -99.810 7.990 2.220 0.151 C19 A1EOB 2 A1EOB N5 N1 N 0 1 Y N N N N N 163.531 18.699 -99.445 7.635 1.548 1.232 N5 A1EOB 3 A1EOB C18 C3 C 0 1 Y N N N N N 163.498 18.463 -98.117 6.795 0.533 1.134 C18 A1EOB 4 A1EOB C17 C4 C 0 1 Y N N N N N 163.845 19.406 -97.159 6.287 0.173 -0.102 C17 A1EOB 5 A1EOB N4 N2 N 0 1 Y N N N N N 164.174 20.675 -97.520 6.642 0.844 -1.183 N4 A1EOB 6 A1EOB C20 C5 C 0 1 Y N N N N N 164.181 20.911 -98.840 7.478 1.863 -1.084 C20 A1EOB 7 A1EOB C16 C6 C 0 1 N N N N N N 163.895 19.067 -95.667 5.329 -0.985 -0.214 C16 A1EOB 8 A1EOB N3 N3 N 0 1 N N N N N N 165.120 18.306 -95.334 3.953 -0.485 -0.184 N3 A1EOB 9 A1EOB C15 C7 C 0 1 N N N N N N 166.023 18.796 -94.332 2.921 -1.347 -0.271 C15 A1EOB 10 A1EOB O2 O1 O 0 1 N N N N N N 165.863 19.923 -93.865 3.131 -2.530 -0.467 O2 A1EOB 11 A1EOB C8 C8 C 0 1 N N N N N N 167.164 17.917 -93.855 1.546 -0.861 -0.130 C8 A1EOB 12 A1EOB C9 C9 C 0 1 N N N N N N 167.261 16.505 -94.321 1.290 0.531 -0.034 C9 A1EOB 13 A1EOB O1 O2 O 0 1 N N N N N N 166.570 15.979 -95.192 2.196 1.348 -0.065 O1 A1EOB 14 A1EOB C10 C10 C 0 1 Y N N N N N 168.325 15.701 -93.607 -0.115 0.947 0.106 C10 A1EOB 15 A1EOB C11 C11 C 0 1 Y N N N N N 168.494 14.377 -93.977 -0.456 2.303 0.207 C11 A1EOB 16 A1EOB C12 C12 C 0 1 Y N N N N N 169.432 13.612 -93.311 -1.779 2.628 0.334 C12 A1EOB 17 A1EOB C13 C13 C 0 1 Y N N N N N 170.271 14.246 -92.407 -2.736 1.612 0.359 C13 A1EOB 18 A1EOB N2 N4 N 0 1 Y N N N N N 170.173 15.535 -92.069 -2.390 0.338 0.262 N2 A1EOB 19 A1EOB C14 C14 C 0 1 Y N N N N N 169.183 16.275 -92.652 -1.119 -0.025 0.137 C14 A1EOB 20 A1EOB N1 N5 N 0 1 N N N N N N 169.079 17.666 -92.380 -0.812 -1.387 0.038 N1 A1EOB 21 A1EOB C7 C15 C 0 1 N N N N N N 168.054 18.409 -92.987 0.480 -1.769 -0.096 C7 A1EOB 22 A1EOB S1 S1 S 0 1 N N N N N N 168.105 20.113 -92.391 0.491 -3.538 -0.201 S1 A1EOB 23 A1EOB C4 C16 C 0 1 Y N N N N N 169.610 19.765 -91.466 -1.263 -3.703 -0.067 C4 A1EOB 24 A1EOB C5 C17 C 0 1 Y N N N N N 169.954 18.421 -91.503 -1.765 -2.414 0.062 C5 A1EOB 25 A1EOB C6 C18 C 0 1 Y N N N N N 171.023 17.948 -90.753 -3.155 -2.262 0.186 C6 A1EOB 26 A1EOB C1 C19 C 0 1 Y N N N N N 171.738 18.825 -89.944 -3.980 -3.362 0.195 C1 A1EOB 27 A1EOB C2 C20 C 0 1 Y N N N N N 171.319 20.145 -89.816 -3.460 -4.641 0.084 C2 A1EOB 28 A1EOB C3 C21 C 0 1 Y N N N N N 170.315 20.640 -90.642 -2.098 -4.810 -0.065 C3 A1EOB 29 A1EOB N6 N6 N 0 1 N N N N N N 171.284 13.446 -91.784 -4.075 1.943 0.488 N6 A1EOB 30 A1EOB C26 C22 C 0 1 N N N N N N 171.089 12.016 -91.930 -4.914 0.729 0.589 C26 A1EOB 31 A1EOB C25 C23 C 0 1 N N N N N N 171.990 11.063 -91.147 -6.171 1.079 1.346 C25 A1EOB 32 A1EOB C24 C24 C 0 1 N N N N N N 171.915 10.972 -89.637 -7.314 1.494 0.406 C24 A1EOB 33 A1EOB N7 N7 N 0 1 N N N N N N 172.546 12.119 -88.905 -6.851 2.366 -0.698 N7 A1EOB 34 A1EOB C27 C25 C 0 1 N N N N N N 173.675 11.618 -88.097 -7.989 2.975 -1.400 C27 A1EOB 35 A1EOB C23 C26 C 0 1 N N N N N N 173.048 13.227 -89.766 -5.897 3.371 -0.288 C23 A1EOB 36 A1EOB C22 C27 C 0 1 N N N N N N 171.969 13.993 -90.596 -4.472 2.829 -0.521 C22 A1EOB 37 A1EOB H13 H1 H 0 1 N N N N N N 163.969 19.371 -101.896 9.970 3.015 0.153 H13 A1EOB 38 A1EOB H14 H2 H 0 1 N N N N N N 163.545 21.090 -101.591 8.733 4.104 -0.520 H14 A1EOB 39 A1EOB H12 H3 H 0 1 N N N N N N 165.250 20.544 -101.436 8.834 3.850 1.239 H12 A1EOB 40 A1EOB H11 H4 H 0 1 N N N N N N 163.184 17.486 -97.780 6.504 -0.015 2.018 H11 A1EOB 41 A1EOB H10 H5 H 0 1 N N N N N N 164.370 21.921 -99.172 7.765 2.414 -1.967 H10 A1EOB 42 A1EOB H9 H6 H 0 1 N N N N N N 163.883 20.001 -95.086 5.504 -1.512 -1.152 H9 A1EOB 43 A1EOB H8 H7 H 0 1 N N N N N N 163.014 18.462 -95.406 5.486 -1.668 0.621 H8 A1EOB 44 A1EOB H7 H8 H 0 1 N N N N N N 165.319 17.448 -95.808 3.784 0.467 -0.102 H7 A1EOB 45 A1EOB H6 H10 H 0 1 N N N N N N 167.902 13.950 -94.773 0.305 3.070 0.185 H6 A1EOB 46 A1EOB H5 H11 H 0 1 N N N N N N 169.510 12.550 -93.489 -2.081 3.661 0.415 H5 A1EOB 47 A1EOB H4 H12 H 0 1 N N N N N N 171.298 16.904 -90.798 -3.580 -1.273 0.275 H4 A1EOB 48 A1EOB H1 H13 H 0 1 N N N N N N 172.616 18.482 -89.417 -5.048 -3.227 0.291 H1 A1EOB 49 A1EOB H2 H14 H 0 1 N N N N N N 171.773 20.786 -89.075 -4.117 -5.498 0.093 H2 A1EOB 50 A1EOB H3 H15 H 0 1 N N N N N N 170.084 21.695 -90.645 -1.682 -5.803 -0.157 H3 A1EOB 51 A1EOB H24 H16 H 0 1 N N N N N N 170.053 11.800 -91.630 -5.173 0.379 -0.410 H24 A1EOB 52 A1EOB H23 H17 H 0 1 N N N N N N 171.219 11.780 -92.996 -4.369 -0.049 1.124 H23 A1EOB 53 A1EOB H21 H18 H 0 1 N N N N N N 171.783 10.053 -91.530 -6.487 0.213 1.927 H21 A1EOB 54 A1EOB H22 H19 H 0 1 N N N N N N 173.026 11.343 -91.391 -5.957 1.902 2.028 H22 A1EOB 55 A1EOB H19 H20 H 0 1 N N N N N N 170.854 10.925 -89.349 -7.766 0.597 -0.018 H19 A1EOB 56 A1EOB H20 H21 H 0 1 N N N N N N 172.421 10.047 -89.325 -8.069 2.028 0.984 H20 A1EOB 57 A1EOB H25 H23 H 0 1 N N N N N N 173.329 10.797 -87.451 -8.568 3.576 -0.700 H25 A1EOB 58 A1EOB H26 H24 H 0 1 N N N N N N 174.468 11.250 -88.764 -7.621 3.610 -2.206 H26 A1EOB 59 A1EOB H27 H25 H 0 1 N N N N N N 174.070 12.434 -87.473 -8.622 2.191 -1.816 H27 A1EOB 60 A1EOB H18 H26 H 0 1 N N N N N N 173.776 12.801 -90.472 -6.044 4.276 -0.878 H18 A1EOB 61 A1EOB H17 H27 H 0 1 N N N N N N 173.552 13.957 -89.115 -6.035 3.597 0.769 H17 A1EOB 62 A1EOB H15 H28 H 0 1 N N N N N N 172.459 14.917 -90.936 -3.775 3.667 -0.551 H15 A1EOB 63 A1EOB H16 H29 H 0 1 N N N N N N 171.170 14.243 -89.883 -4.442 2.311 -1.479 H16 A1EOB 64 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1EOB C21 C19 SING N N 1 A1EOB C19 N5 DOUB Y N 2 A1EOB C19 C20 SING Y N 3 A1EOB N5 C18 SING Y N 4 A1EOB C20 N4 DOUB Y N 5 A1EOB C18 C17 DOUB Y N 6 A1EOB N4 C17 SING Y N 7 A1EOB C17 C16 SING N N 8 A1EOB C16 N3 SING N N 9 A1EOB N3 C15 SING N N 10 A1EOB O1 C9 DOUB N N 11 A1EOB C15 O2 DOUB N N 12 A1EOB C15 C8 SING N N 13 A1EOB C9 C8 SING N N 14 A1EOB C9 C10 SING N N 15 A1EOB C11 C10 SING Y N 16 A1EOB C11 C12 DOUB Y N 17 A1EOB C8 C7 DOUB N N 18 A1EOB C10 C14 DOUB Y N 19 A1EOB C12 C13 SING Y N 20 A1EOB C7 S1 SING N N 21 A1EOB C7 N1 SING N N 22 A1EOB C14 N1 SING N N 23 A1EOB C14 N2 SING Y N 24 A1EOB C13 N2 DOUB Y N 25 A1EOB C13 N6 SING N N 26 A1EOB S1 C4 SING N N 27 A1EOB N1 C5 SING N N 28 A1EOB C26 N6 SING N N 29 A1EOB C26 C25 SING N N 30 A1EOB N6 C22 SING N N 31 A1EOB C5 C4 DOUB Y N 32 A1EOB C5 C6 SING Y N 33 A1EOB C4 C3 SING Y N 34 A1EOB C25 C24 SING N N 35 A1EOB C6 C1 DOUB Y N 36 A1EOB C3 C2 DOUB Y N 37 A1EOB C22 C23 SING N N 38 A1EOB C1 C2 SING Y N 39 A1EOB C23 N7 SING N N 40 A1EOB C24 N7 SING N N 41 A1EOB N7 C27 SING N N 42 A1EOB C21 H13 SING N N 43 A1EOB C21 H14 SING N N 44 A1EOB C21 H12 SING N N 45 A1EOB C18 H11 SING N N 46 A1EOB C20 H10 SING N N 47 A1EOB C16 H9 SING N N 48 A1EOB C16 H8 SING N N 49 A1EOB N3 H7 SING N N 50 A1EOB C11 H6 SING N N 51 A1EOB C12 H5 SING N N 52 A1EOB C6 H4 SING N N 53 A1EOB C1 H1 SING N N 54 A1EOB C2 H2 SING N N 55 A1EOB C3 H3 SING N N 56 A1EOB C26 H24 SING N N 57 A1EOB C26 H23 SING N N 58 A1EOB C25 H21 SING N N 59 A1EOB C25 H22 SING N N 60 A1EOB C24 H19 SING N N 61 A1EOB C24 H20 SING N N 62 A1EOB C27 H25 SING N N 63 A1EOB C27 H26 SING N N 64 A1EOB C27 H27 SING N N 65 A1EOB C23 H18 SING N N 66 A1EOB C23 H17 SING N N 67 A1EOB C22 H15 SING N N 68 A1EOB C22 H16 SING N N 69 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1EOB InChI InChI 1.06 "InChI=1S/C27H27N7O2S/c1-17-14-29-18(15-28-17)16-30-26(36)23-24(35)19-8-9-22(33-11-5-10-32(2)12-13-33)31-25(19)34-20-6-3-4-7-21(20)37-27(23)34/h3-4,6-9,14-15H,5,10-13,16H2,1-2H3,(H,30,36)" A1EOB InChIKey InChI 1.06 XGPBJCHFROADCK-UHFFFAOYSA-N A1EOB SMILES_CANONICAL CACTVS 3.385 "CN1CCCN(CC1)c2ccc3C(=O)C(=C4Sc5ccccc5N4c3n2)C(=O)NCc6cnc(C)cn6" A1EOB SMILES CACTVS 3.385 "CN1CCCN(CC1)c2ccc3C(=O)C(=C4Sc5ccccc5N4c3n2)C(=O)NCc6cnc(C)cn6" A1EOB SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cnc(cn1)CNC(=O)C2=C3N(c4ccccc4S3)c5c(ccc(n5)N6CCCN(CC6)C)C2=O" A1EOB SMILES "OpenEye OEToolkits" 2.0.7 "Cc1cnc(cn1)CNC(=O)C2=C3N(c4ccccc4S3)c5c(ccc(n5)N6CCCN(CC6)C)C2=O" # _pdbx_chem_comp_identifier.comp_id A1EOB _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-(4-methyl-1,4-diazepan-1-yl)-~{N}-[(5-methylpyrazin-2-yl)methyl]-5-oxidanylidene-[1,3]benzothiazolo[3,2-a][1,8]naphthyridine-6-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1EOB "Create component" 2025-03-28 PDBC A1EOB "Modify coordinates" 2025-10-13 PDBC A1EOB "Initial release" 2026-06-24 RCSB #