data_A1EOE # _chem_comp.id A1EOE _chem_comp.name "(4~{a}~{S})-8-azanyl-3-methyl-~{N}-[1-[4-(oxan-4-ylamino)naphthalen-1-yl]cyclopropyl]-2,4,4~{a},5-tetrahydro-1~{H}-pyrazino[2,1-c][1,4]benzoxazine-9-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C31 H37 N5 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-04-01 _chem_comp.pdbx_modified_date 2025-12-19 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 527.657 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1EOE _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9U7D _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBC _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1EOE C4 C1 C 0 1 Y N N N N N 32.339 48.971 -0.094 3.136 -0.272 0.236 C4 A1EOE 1 A1EOE C5 C2 C 0 1 Y N N N N N 33.701 48.704 -0.210 4.266 0.328 0.766 C5 A1EOE 2 A1EOE C7 C3 C 0 1 N N N N N N 34.540 50.682 0.975 5.560 -1.390 -0.236 C7 A1EOE 3 A1EOE C8 C4 C 0 1 N N N N N N 35.266 51.989 0.650 5.796 -0.637 -1.547 C8 A1EOE 4 A1EOE C10 C5 C 0 1 N N N N N N 37.607 52.720 0.339 7.325 0.853 -2.691 C10 A1EOE 5 A1EOE C13 C6 C 0 1 N N N N N N 36.377 47.976 -0.063 6.399 1.439 2.100 C13 A1EOE 6 A1EOE C15 C7 C 0 1 Y N N N N N 34.112 47.407 -0.511 4.215 1.657 1.185 C15 A1EOE 7 A1EOE C17 C8 C 0 1 Y N N N N N 31.816 46.655 -0.603 1.897 1.787 0.550 C17 A1EOE 8 A1EOE C20 C9 C 0 1 N N N N N N 28.139 49.739 -1.113 -0.435 -2.136 -1.309 C20 A1EOE 9 A1EOE C21 C10 C 0 1 N N N N N N 27.336 48.749 -1.924 -0.356 -3.630 -1.630 C21 A1EOE 10 A1EOE C22 C11 C 0 1 N N N N N N 27.632 50.118 -2.486 -0.369 -2.602 -2.765 C22 A1EOE 11 A1EOE C24 C12 C 0 1 Y N N N N N 27.679 51.770 0.413 -2.275 -2.049 0.415 C24 A1EOE 12 A1EOE C26 C13 C 0 1 Y N N N N N 27.240 53.712 1.839 -4.033 -1.986 2.099 C26 A1EOE 13 A1EOE C28 C14 C 0 1 Y N N N N N 28.611 53.952 -0.097 -2.119 -3.402 2.382 C28 A1EOE 14 A1EOE C11 C15 C 0 1 N N N N N N 37.035 50.346 0.161 6.879 1.151 -0.330 C11 A1EOE 15 A1EOE C12 C16 C 0 1 N N S N N N 36.050 49.385 -0.488 6.637 0.408 0.988 C12 A1EOE 16 A1EOE C16 C17 C 0 1 Y N N N N N 33.189 46.403 -0.707 3.034 2.378 1.077 C16 A1EOE 17 A1EOE C2 C18 C 0 1 N N N N N N 29.932 48.279 -0.263 0.746 -0.186 -0.447 C2 A1EOE 18 A1EOE C23 C19 C 0 1 Y N N N N N 27.528 50.374 0.144 -1.753 -1.600 -0.810 C23 A1EOE 19 A1EOE C25 C20 C 0 1 Y N N N N N 27.050 52.335 1.576 -3.513 -1.537 0.875 C25 A1EOE 20 A1EOE C27 C21 C 0 1 Y N N N N N 28.002 54.491 1.020 -3.342 -2.905 2.828 C27 A1EOE 21 A1EOE C29 C22 C 0 1 Y N N N N N 28.461 52.631 -0.400 -1.587 -2.993 1.198 C29 A1EOE 22 A1EOE C3 C23 C 0 1 Y N N N N N 31.395 47.959 -0.294 1.946 0.452 0.117 C3 A1EOE 23 A1EOE C30 C24 C 0 1 Y N N N N N 26.793 49.607 1.010 -2.437 -0.681 -1.545 C30 A1EOE 24 A1EOE C31 C25 C 0 1 Y N N N N N 26.180 50.136 2.136 -3.655 -0.171 -1.104 C31 A1EOE 25 A1EOE C32 C26 C 0 1 Y N N N N N 26.292 51.475 2.433 -4.201 -0.585 0.092 C32 A1EOE 26 A1EOE C34 C27 C 0 1 N N N N N N 24.530 51.507 4.232 -6.129 0.919 -0.294 C34 A1EOE 27 A1EOE C35 C28 C 0 1 N N N N N N 24.293 52.277 5.522 -7.627 0.865 0.020 C35 A1EOE 28 A1EOE C36 C29 C 0 1 N N N N N N 22.863 52.092 5.983 -8.348 1.952 -0.782 C36 A1EOE 29 A1EOE C38 C30 C 0 1 N N N N N N 22.089 50.974 4.055 -6.401 3.352 -0.779 C38 A1EOE 30 A1EOE C39 C31 C 0 1 N N N N N N 23.294 51.554 3.342 -5.602 2.322 0.023 C39 A1EOE 31 A1EOE N18 N1 N 0 1 N N N N N N 30.926 45.622 -0.849 0.714 2.512 0.450 N18 A1EOE 32 A1EOE N19 N2 N 0 1 N N N N N N 29.542 49.361 -0.956 0.759 -1.500 -0.747 N19 A1EOE 33 A1EOE N33 N3 N 0 1 N N N N N N 25.678 52.055 3.527 -5.421 -0.069 0.524 N33 A1EOE 34 A1EOE N6 N4 N 0 1 N N N N N N 34.665 49.725 -0.119 5.440 -0.429 0.867 N6 A1EOE 35 A1EOE N9 N5 N 0 1 N N N N N N 36.564 51.734 -0.057 7.012 0.179 -1.424 N9 A1EOE 36 A1EOE O1 O1 O 0 1 N N N N N N 29.149 47.535 0.321 -0.258 0.472 -0.643 O1 A1EOE 37 A1EOE O14 O2 O 0 1 N N N N N N 35.435 47.054 -0.627 5.311 2.277 1.699 O14 A1EOE 38 A1EOE O37 O3 O 0 1 N N N N N N 22.303 50.882 5.474 -7.789 3.228 -0.463 O37 A1EOE 39 A1EOE H1 H1 H 0 1 N N N N N N 32.009 49.969 0.153 3.175 -1.300 -0.090 H1 A1EOE 40 A1EOE H2 H2 H 0 1 N N N N N N 33.474 50.896 1.145 4.642 -1.972 -0.312 H2 A1EOE 41 A1EOE H3 H3 H 0 1 N N N N N N 34.976 50.246 1.886 6.399 -2.058 -0.045 H3 A1EOE 42 A1EOE H4 H4 H 0 1 N N N N N N 35.469 52.528 1.587 5.919 -1.352 -2.360 H4 A1EOE 43 A1EOE H5 H5 H 0 1 N N N N N N 34.622 52.605 0.005 4.943 0.008 -1.756 H5 A1EOE 44 A1EOE H6 H6 H 0 1 N N N N N N 37.232 53.740 0.167 8.264 1.398 -2.591 H6 A1EOE 45 A1EOE H7 H7 H 0 1 N N N N N N 37.846 52.592 1.405 7.418 0.111 -3.484 H7 A1EOE 46 A1EOE H8 H8 H 0 1 N N N N N N 38.513 52.556 -0.263 6.525 1.551 -2.938 H8 A1EOE 47 A1EOE H9 H9 H 0 1 N N N N N N 36.337 47.910 1.034 6.146 0.927 3.029 H9 A1EOE 48 A1EOE H10 H10 H 0 1 N N N N N N 37.389 47.718 -0.409 7.296 2.041 2.244 H10 A1EOE 49 A1EOE H11 H11 H 0 1 N N N N N N 26.312 48.490 -1.618 0.584 -4.140 -1.423 H11 A1EOE 50 A1EOE H12 H12 H 0 1 N N N N N N 27.827 47.862 -2.351 -1.257 -4.225 -1.480 H12 A1EOE 51 A1EOE H13 H13 H 0 1 N N N N N N 28.338 50.228 -3.322 -1.278 -2.522 -3.361 H13 A1EOE 52 A1EOE H14 H14 H 0 1 N N N N N N 26.824 50.857 -2.589 0.563 -2.437 -3.304 H14 A1EOE 53 A1EOE H15 H15 H 0 1 N N N N N N 26.772 54.155 2.706 -4.976 -1.604 2.461 H15 A1EOE 54 A1EOE H16 H16 H 0 1 N N N N N N 29.211 54.583 -0.736 -1.591 -4.130 2.980 H16 A1EOE 55 A1EOE H17 H17 H 0 1 N N N N N N 37.094 50.141 1.240 6.038 1.813 -0.533 H17 A1EOE 56 A1EOE H18 H18 H 0 1 N N N N N N 38.029 50.218 -0.292 7.794 1.738 -0.253 H18 A1EOE 57 A1EOE H19 H19 H 0 1 N N N N N N 36.160 49.458 -1.580 7.497 -0.212 1.239 H19 A1EOE 58 A1EOE H20 H20 H 0 1 N N N N N N 33.530 45.406 -0.945 3.000 3.405 1.410 H20 A1EOE 59 A1EOE H21 H21 H 0 1 N N N N N N 28.131 55.539 1.246 -3.748 -3.253 3.767 H21 A1EOE 60 A1EOE H22 H22 H 0 1 N N N N N N 28.948 52.231 -1.277 -0.642 -3.392 0.861 H22 A1EOE 61 A1EOE H23 H23 H 0 1 N N N N N N 26.687 48.551 0.808 -2.028 -0.342 -2.485 H23 A1EOE 62 A1EOE H24 H24 H 0 1 N N N N N N 25.609 49.490 2.787 -4.177 0.558 -1.706 H24 A1EOE 63 A1EOE H25 H25 H 0 1 N N N N N N 24.731 50.456 4.488 -5.970 0.700 -1.350 H25 A1EOE 64 A1EOE H26 H26 H 0 1 N N N N N N 24.977 51.904 6.299 -8.022 -0.113 -0.254 H26 A1EOE 65 A1EOE H27 H27 H 0 1 N N N N N N 24.484 53.346 5.348 -7.782 1.036 1.086 H27 A1EOE 66 A1EOE H28 H28 H 0 1 N N N N N N 22.260 52.942 5.629 -8.227 1.758 -1.847 H28 A1EOE 67 A1EOE H29 H29 H 0 1 N N N N N N 22.843 52.061 7.082 -9.409 1.946 -0.530 H29 A1EOE 68 A1EOE H30 H30 H 0 1 N N N N N N 21.219 51.620 3.867 -6.059 4.355 -0.525 H30 A1EOE 69 A1EOE H31 H31 H 0 1 N N N N N N 21.891 49.967 3.659 -6.254 3.177 -1.845 H31 A1EOE 70 A1EOE H32 H32 H 0 1 N N N N N N 23.486 50.972 2.429 -5.716 2.522 1.088 H32 A1EOE 71 A1EOE H33 H33 H 0 1 N N N N N N 23.084 52.600 3.073 -4.549 2.385 -0.250 H33 A1EOE 72 A1EOE H34 H34 H 0 1 N N N N N N 29.990 45.954 -0.736 -0.054 2.127 -0.002 H34 A1EOE 73 A1EOE H35 H35 H 0 1 N N N N N N 31.051 45.290 -1.784 0.657 3.402 0.831 H35 A1EOE 74 A1EOE H36 H36 H 0 1 N N N N N N 30.242 49.933 -1.383 1.559 -2.025 -0.591 H36 A1EOE 75 A1EOE H37 H37 H 0 1 N N N N N N 26.396 52.145 4.218 -5.801 -0.363 1.366 H37 A1EOE 76 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1EOE C22 C21 SING N N 1 A1EOE C22 C20 SING N N 2 A1EOE C21 C20 SING N N 3 A1EOE C20 N19 SING N N 4 A1EOE C20 C23 SING N N 5 A1EOE N19 C2 SING N N 6 A1EOE N18 C17 SING N N 7 A1EOE C16 C17 DOUB Y N 8 A1EOE C16 C15 SING Y N 9 A1EOE O14 C15 SING N N 10 A1EOE O14 C13 SING N N 11 A1EOE C17 C3 SING Y N 12 A1EOE C15 C5 DOUB Y N 13 A1EOE C12 N6 SING N N 14 A1EOE C12 C13 SING N N 15 A1EOE C12 C11 SING N N 16 A1EOE C29 C28 DOUB Y N 17 A1EOE C29 C24 SING Y N 18 A1EOE C3 C2 SING N N 19 A1EOE C3 C4 DOUB Y N 20 A1EOE C2 O1 DOUB N N 21 A1EOE C5 N6 SING N N 22 A1EOE C5 C4 SING Y N 23 A1EOE N6 C7 SING N N 24 A1EOE C28 C27 SING Y N 25 A1EOE N9 C11 SING N N 26 A1EOE N9 C10 SING N N 27 A1EOE N9 C8 SING N N 28 A1EOE C23 C24 DOUB Y N 29 A1EOE C23 C30 SING Y N 30 A1EOE C24 C25 SING Y N 31 A1EOE C8 C7 SING N N 32 A1EOE C30 C31 DOUB Y N 33 A1EOE C27 C26 DOUB Y N 34 A1EOE C25 C26 SING Y N 35 A1EOE C25 C32 DOUB Y N 36 A1EOE C31 C32 SING Y N 37 A1EOE C32 N33 SING N N 38 A1EOE C39 C38 SING N N 39 A1EOE C39 C34 SING N N 40 A1EOE N33 C34 SING N N 41 A1EOE C38 O37 SING N N 42 A1EOE C34 C35 SING N N 43 A1EOE O37 C36 SING N N 44 A1EOE C35 C36 SING N N 45 A1EOE C4 H1 SING N N 46 A1EOE C7 H2 SING N N 47 A1EOE C7 H3 SING N N 48 A1EOE C8 H4 SING N N 49 A1EOE C8 H5 SING N N 50 A1EOE C10 H6 SING N N 51 A1EOE C10 H7 SING N N 52 A1EOE C10 H8 SING N N 53 A1EOE C13 H9 SING N N 54 A1EOE C13 H10 SING N N 55 A1EOE C21 H11 SING N N 56 A1EOE C21 H12 SING N N 57 A1EOE C22 H13 SING N N 58 A1EOE C22 H14 SING N N 59 A1EOE C26 H15 SING N N 60 A1EOE C28 H16 SING N N 61 A1EOE C11 H17 SING N N 62 A1EOE C11 H18 SING N N 63 A1EOE C12 H19 SING N N 64 A1EOE C16 H20 SING N N 65 A1EOE C27 H21 SING N N 66 A1EOE C29 H22 SING N N 67 A1EOE C30 H23 SING N N 68 A1EOE C31 H24 SING N N 69 A1EOE C34 H25 SING N N 70 A1EOE C35 H26 SING N N 71 A1EOE C35 H27 SING N N 72 A1EOE C36 H28 SING N N 73 A1EOE C36 H29 SING N N 74 A1EOE C38 H30 SING N N 75 A1EOE C38 H31 SING N N 76 A1EOE C39 H32 SING N N 77 A1EOE C39 H33 SING N N 78 A1EOE N18 H34 SING N N 79 A1EOE N18 H35 SING N N 80 A1EOE N19 H36 SING N N 81 A1EOE N33 H37 SING N N 82 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1EOE InChI InChI 1.06 "InChI=1S/C31H37N5O3/c1-35-12-13-36-21(18-35)19-39-29-17-26(32)24(16-28(29)36)30(37)34-31(10-11-31)25-6-7-27(23-5-3-2-4-22(23)25)33-20-8-14-38-15-9-20/h2-7,16-17,20-21,33H,8-15,18-19,32H2,1H3,(H,34,37)/t21-/m0/s1" A1EOE InChIKey InChI 1.06 IFYKCXWVMYHVGS-NRFANRHFSA-N A1EOE SMILES_CANONICAL CACTVS 3.385 "CN1CCN2[C@H](COc3cc(N)c(cc23)C(=O)NC4(CC4)c5ccc(NC6CCOCC6)c7ccccc57)C1" A1EOE SMILES CACTVS 3.385 "CN1CCN2[CH](COc3cc(N)c(cc23)C(=O)NC4(CC4)c5ccc(NC6CCOCC6)c7ccccc57)C1" A1EOE SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN1CCN2c3cc(c(cc3OC[C@@H]2C1)N)C(=O)NC4(CC4)c5ccc(c6c5cccc6)NC7CCOCC7" A1EOE SMILES "OpenEye OEToolkits" 2.0.7 "CN1CCN2c3cc(c(cc3OCC2C1)N)C(=O)NC4(CC4)c5ccc(c6c5cccc6)NC7CCOCC7" # _pdbx_chem_comp_identifier.comp_id A1EOE _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(4~{a}~{S})-8-azanyl-3-methyl-~{N}-[1-[4-(oxan-4-ylamino)naphthalen-1-yl]cyclopropyl]-2,4,4~{a},5-tetrahydro-1~{H}-pyrazino[2,1-c][1,4]benzoxazine-9-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1EOE "Create component" 2025-04-01 PDBC A1EOE "Initial release" 2025-12-24 RCSB #