data_A1EOM # _chem_comp.id A1EOM _chem_comp.name "1-[2-[6-cyano-2-[(1-methylsulfonylpiperidin-4-yl)amino]-7-oxidanylidene-pyrido[2,3-d]pyrimidin-8-yl]ethyl]guanidine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H23 N9 O3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-04-03 _chem_comp.pdbx_modified_date 2026-04-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 433.488 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1EOM _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9UAU _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBC _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1EOM N12 N1 N 0 1 Y N N N N N -0.940 6.807 -28.197 -1.239 0.217 -0.691 N12 A1EOM 1 A1EOM C13 C1 C 0 1 Y N N N N N 0.082 6.352 -27.528 -2.335 0.900 -0.381 C13 A1EOM 2 A1EOM C15 C2 C 0 1 N N N N N N 0.450 8.634 -27.015 -3.699 -1.008 -1.094 C15 A1EOM 3 A1EOM C21 C3 C 0 1 N N N N N N 1.908 6.858 -26.146 -4.692 1.041 -0.242 C21 A1EOM 4 A1EOM C24 C4 C 0 1 N N N N N N 3.388 5.047 -25.291 -5.770 3.138 0.634 C24 A1EOM 5 A1EOM C26 C5 C 0 1 N N N N N N 1.442 4.598 -26.801 -3.336 2.964 0.477 C26 A1EOM 6 A1EOM C28 C6 C 0 1 Y N N N N N -0.464 4.177 -28.236 -0.902 2.730 0.300 C28 A1EOM 7 A1EOM C01 C7 C 0 1 N N N N N N -5.010 9.605 -30.058 4.258 0.973 0.962 C01 A1EOM 8 A1EOM C04 C8 C 0 1 N N N N N N -6.128 12.169 -28.139 6.203 -2.019 0.630 C04 A1EOM 9 A1EOM C07 C9 C 0 1 N N N N N N -4.954 9.081 -27.636 4.779 0.513 -1.469 C07 A1EOM 10 A1EOM C08 C10 C 0 1 N N N N N N -4.226 7.754 -27.885 3.387 -0.105 -1.635 C08 A1EOM 11 A1EOM C09 C11 C 0 1 N N N N N N -3.429 7.830 -29.190 2.412 0.577 -0.673 C09 A1EOM 12 A1EOM C11 C12 C 0 1 Y N N N N N -1.748 5.978 -28.887 -0.041 0.753 -0.518 C11 A1EOM 13 A1EOM C16 C13 C 0 1 N N N N N N 0.260 9.401 -25.759 -3.695 -2.014 0.059 C16 A1EOM 14 A1EOM C18 C14 C 0 1 N N N N N N -2.158 10.034 -25.366 -3.833 -4.450 0.376 C18 A1EOM 15 A1EOM C23 C15 C 0 1 N N N N N N 2.198 5.504 -26.110 -4.589 2.401 0.297 C23 A1EOM 16 A1EOM C27 C16 C 0 1 Y N N N N N 0.357 5.019 -27.517 -2.195 2.208 0.136 C27 A1EOM 17 A1EOM C30 C17 C 0 1 N N N N N N -4.363 8.263 -30.321 2.872 0.349 0.768 C30 A1EOM 18 A1EOM N02 N2 N 0 1 N N N N N N -5.702 9.504 -28.802 5.168 0.428 -0.055 N02 A1EOM 19 A1EOM N10 N3 N 0 1 N N N N N N -2.865 6.553 -29.594 1.073 0.010 -0.853 N10 A1EOM 20 A1EOM N14 N4 N 0 1 N N N N N N 0.836 7.253 -26.854 -3.579 0.350 -0.557 N14 A1EOM 21 A1EOM N17 N5 N 0 1 N N N N N N -1.026 9.148 -25.188 -3.815 -3.372 -0.478 N17 A1EOM 22 A1EOM N19 N6 N 0 1 N N N N N N -2.169 11.068 -26.083 -3.738 -4.253 1.733 N19 A1EOM 23 A1EOM N20 N7 N 0 1 N N N N N N -3.351 9.682 -24.660 -3.940 -5.658 -0.102 N20 A1EOM 24 A1EOM N25 N8 N 0 1 N N N N N N 4.289 4.751 -24.676 -6.707 3.722 0.901 N25 A1EOM 25 A1EOM N29 N9 N 0 1 Y N N N N N -1.511 4.658 -28.908 0.130 1.979 -0.036 N29 A1EOM 26 A1EOM O05 O1 O 0 1 N N N N N N -7.767 10.704 -29.711 6.928 0.348 1.624 O05 A1EOM 27 A1EOM O06 O2 O 0 1 N N N N N N -7.765 10.156 -27.410 7.438 -0.101 -0.755 O06 A1EOM 28 A1EOM O22 O3 O 0 1 N N N N N N 2.572 7.678 -25.566 -5.786 0.534 -0.405 O22 A1EOM 29 A1EOM S03 S1 S 0 1 N N N N N N -6.935 10.598 -28.536 6.605 -0.268 0.385 S03 A1EOM 30 A1EOM H151 H1 H 0 0 N N N N N N 1.232 9.137 -27.603 -2.859 -1.212 -1.757 H151 A1EOM 31 A1EOM H152 H2 H 0 0 N N N N N N -0.499 8.657 -27.571 -4.632 -1.097 -1.650 H152 A1EOM 32 A1EOM H261 H3 H 0 0 N N N N N N 1.702 3.550 -26.781 -3.235 3.963 0.873 H261 A1EOM 33 A1EOM H281 H4 H 0 0 N N N N N N -0.257 3.117 -28.255 -0.755 3.726 0.692 H281 A1EOM 34 A1EOM H011 H5 H 0 0 N N N N N N -4.241 10.390 -30.003 4.190 2.055 0.851 H011 A1EOM 35 A1EOM H012 H6 H 0 0 N N N N N N -5.721 9.845 -30.862 4.634 0.731 1.956 H012 A1EOM 36 A1EOM H043 H7 H 0 0 N N N N N N -5.506 12.045 -27.240 5.816 -2.437 -0.300 H043 A1EOM 37 A1EOM H042 H8 H 0 0 N N N N N N -5.495 12.480 -28.983 7.102 -2.560 0.925 H042 A1EOM 38 A1EOM H041 H9 H 0 0 N N N N N N -6.893 12.937 -27.952 5.450 -2.113 1.412 H041 A1EOM 39 A1EOM H071 H10 H 0 0 N N N N N N -4.212 9.854 -27.388 5.497 -0.034 -2.079 H071 A1EOM 40 A1EOM H072 H11 H 0 0 N N N N N N -5.649 8.955 -26.792 4.756 1.558 -1.780 H072 A1EOM 41 A1EOM H082 H12 H 0 0 N N N N N N -4.964 6.941 -27.956 3.046 0.038 -2.661 H082 A1EOM 42 A1EOM H081 H13 H 0 0 N N N N N N -3.539 7.553 -27.050 3.434 -1.171 -1.413 H081 A1EOM 43 A1EOM H091 H14 H 0 0 N N N N N N -2.630 8.577 -29.079 2.385 1.646 -0.881 H091 A1EOM 44 A1EOM H161 H15 H 0 0 N N N N N N 1.037 9.107 -25.038 -2.762 -1.925 0.616 H161 A1EOM 45 A1EOM H162 H16 H 0 0 N N N N N N 0.350 10.475 -25.977 -4.535 -1.810 0.723 H162 A1EOM 46 A1EOM H302 H17 H 0 0 N N N N N N -5.154 7.507 -30.434 2.923 -0.721 0.969 H302 A1EOM 47 A1EOM H301 H18 H 0 0 N N N N N N -3.782 8.328 -31.253 2.164 0.815 1.454 H301 A1EOM 48 A1EOM H101 H19 H 0 0 N N N N N N -3.608 5.885 -29.543 0.969 -0.887 -1.207 H101 A1EOM 49 A1EOM H171 H20 H 0 0 N N N N N N -1.150 8.321 -24.640 -3.882 -3.511 -1.436 H171 A1EOM 50 A1EOM H191 H21 H 0 0 N N N N N N -2.999 11.622 -26.149 -3.658 -3.354 2.089 H191 A1EOM 51 A1EOM H1 H22 H 0 1 N N N N N N -1.348 11.336 -26.587 -3.751 -5.013 2.335 H1 A1EOM 52 A1EOM H202 H23 H 0 0 N N N N N N -3.236 8.846 -24.123 -4.006 -5.796 -1.060 H202 A1EOM 53 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1EOM C30 C01 SING N N 1 A1EOM C30 C09 SING N N 2 A1EOM C01 N02 SING N N 3 A1EOM O05 S03 DOUB N N 4 A1EOM N10 C09 SING N N 5 A1EOM N10 C11 SING N N 6 A1EOM C09 C08 SING N N 7 A1EOM N29 C11 DOUB Y N 8 A1EOM N29 C28 SING Y N 9 A1EOM C11 N12 SING Y N 10 A1EOM N02 S03 SING N N 11 A1EOM N02 C07 SING N N 12 A1EOM S03 C04 SING N N 13 A1EOM S03 O06 DOUB N N 14 A1EOM C28 C27 DOUB Y N 15 A1EOM N12 C13 DOUB Y N 16 A1EOM C08 C07 SING N N 17 A1EOM C13 C27 SING Y N 18 A1EOM C13 N14 SING N N 19 A1EOM C27 C26 SING N N 20 A1EOM C15 N14 SING N N 21 A1EOM C15 C16 SING N N 22 A1EOM N14 C21 SING N N 23 A1EOM C26 C23 DOUB N N 24 A1EOM C21 C23 SING N N 25 A1EOM C21 O22 DOUB N N 26 A1EOM C23 C24 SING N N 27 A1EOM N19 C18 SING N N 28 A1EOM C16 N17 SING N N 29 A1EOM C18 N17 SING N N 30 A1EOM C18 N20 DOUB N N 31 A1EOM C24 N25 TRIP N N 32 A1EOM C15 H151 SING N N 33 A1EOM C15 H152 SING N N 34 A1EOM C26 H261 SING N N 35 A1EOM C28 H281 SING N N 36 A1EOM C01 H011 SING N N 37 A1EOM C01 H012 SING N N 38 A1EOM C04 H043 SING N N 39 A1EOM C04 H042 SING N N 40 A1EOM C04 H041 SING N N 41 A1EOM C07 H071 SING N N 42 A1EOM C07 H072 SING N N 43 A1EOM C08 H082 SING N N 44 A1EOM C08 H081 SING N N 45 A1EOM C09 H091 SING N N 46 A1EOM C16 H161 SING N N 47 A1EOM C16 H162 SING N N 48 A1EOM C30 H302 SING N N 49 A1EOM C30 H301 SING N N 50 A1EOM N10 H101 SING N N 51 A1EOM N17 H171 SING N N 52 A1EOM N19 H191 SING N N 53 A1EOM N19 H1 SING N N 54 A1EOM N20 H202 SING N N 55 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1EOM InChI InChI 1.06 "InChI=1S/C17H23N9O3S/c1-30(28,29)25-5-2-13(3-6-25)23-17-22-10-12-8-11(9-18)15(27)26(14(12)24-17)7-4-21-16(19)20/h8,10,13H,2-7H2,1H3,(H4,19,20,21)(H,22,23,24)" A1EOM InChIKey InChI 1.06 FQPXEKNBLLGUBF-UHFFFAOYSA-N A1EOM SMILES_CANONICAL CACTVS 3.385 "C[S](=O)(=O)N1CCC(CC1)Nc2ncc3C=C(C#N)C(=O)N(CCNC(N)=N)c3n2" A1EOM SMILES CACTVS 3.385 "C[S](=O)(=O)N1CCC(CC1)Nc2ncc3C=C(C#N)C(=O)N(CCNC(N)=N)c3n2" A1EOM SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "[H]/N=C(\N)/NCCN1c2c(cnc(n2)NC3CCN(CC3)S(=O)(=O)C)C=C(C1=O)C#N" A1EOM SMILES "OpenEye OEToolkits" 2.0.7 "CS(=O)(=O)N1CCC(CC1)Nc2ncc3c(n2)N(C(=O)C(=C3)C#N)CCNC(=N)N" # _pdbx_chem_comp_identifier.comp_id A1EOM _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "1-[2-[6-cyano-2-[(1-methylsulfonylpiperidin-4-yl)amino]-7-oxidanylidene-pyrido[2,3-d]pyrimidin-8-yl]ethyl]guanidine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1EOM "Create component" 2025-04-03 PDBC A1EOM "Initial release" 2026-04-08 RCSB #