data_A1EQJ # _chem_comp.id A1EQJ _chem_comp.name "2-cyano-N-[(3R)-1-[(3S)-3-ethyl-7-(ethylamino)-5-fluoranyl-2-oxidanylidene-1H-indol-3-yl]piperidin-3-yl]-2-azaspiro[3.3]heptane-6-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H33 F N6 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-05-15 _chem_comp.pdbx_modified_date 2025-06-20 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 468.567 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1EQJ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9M3U _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBC _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1EQJ C10 C1 C 0 1 N N S N N N -62.877 11.000 -17.369 3.133 1.579 -0.350 C10 A1EQJ 1 A1EQJ C11 C2 C 0 1 N N N N N N -63.010 10.444 -15.926 3.108 1.134 -1.797 C11 A1EQJ 2 A1EQJ O12 O1 O 0 1 N N N N N N -64.043 10.119 -15.348 2.892 1.836 -2.763 O12 A1EQJ 3 A1EQJ C13 C3 C 0 1 Y N N N N N -60.759 10.842 -16.189 3.571 -0.695 -0.523 C13 A1EQJ 4 A1EQJ C15 C4 C 0 1 N N N N N N -63.355 9.976 -18.431 4.229 2.624 -0.130 C15 A1EQJ 5 A1EQJ C16 C5 C 0 1 N N N N N N -62.650 8.605 -18.370 5.586 2.026 -0.505 C16 A1EQJ 6 A1EQJ C18 C6 C 0 1 N N N N N N -63.212 13.478 -16.496 1.534 3.369 -0.661 C18 A1EQJ 7 A1EQJ C19 C7 C 0 1 N N N N N N -64.310 14.579 -16.375 0.236 3.973 -0.119 C19 A1EQJ 8 A1EQJ C20 C8 C 0 1 N N N N N N -64.541 15.257 -17.712 -0.908 2.976 -0.319 C20 A1EQJ 9 A1EQJ C21 C9 C 0 1 N N R N N N -65.035 14.185 -18.676 -0.559 1.662 0.387 C21 A1EQJ 10 A1EQJ C22 C10 C 0 1 N N N N N N -64.000 12.974 -18.772 0.762 1.125 -0.170 C22 A1EQJ 11 A1EQJ C24 C11 C 0 1 N N N N N N -66.639 14.513 -23.318 -4.980 -0.221 1.697 C24 A1EQJ 12 A1EQJ C25 C12 C 0 1 N N N N N N -66.028 15.322 -22.150 -3.807 -0.338 0.706 C25 A1EQJ 13 A1EQJ C26 C13 C 0 1 N N N N N N -67.003 16.477 -22.452 -4.795 0.079 -0.400 C26 A1EQJ 14 A1EQJ C27 C14 C 0 1 N N N N N N -67.336 15.793 -23.781 -5.900 -0.468 0.503 C27 A1EQJ 15 A1EQJ C28 C15 C 0 1 N N N N N N -66.915 16.455 -25.117 -6.524 -1.842 0.251 C28 A1EQJ 16 A1EQJ C1 C16 C 0 1 Y N N N N N -59.374 10.954 -15.954 3.863 -1.993 -0.090 C1 A1EQJ 17 A1EQJ C3 C17 C 0 1 N N N N N N -57.396 10.490 -14.570 4.301 -4.387 -0.570 C3 A1EQJ 18 A1EQJ C30 C18 C 0 1 N N N N N N -68.795 15.763 -24.270 -7.318 0.105 0.460 C30 A1EQJ 19 A1EQJ C31 C19 C 0 1 N N N N N N -66.207 14.711 -20.811 -2.712 0.670 0.946 C31 A1EQJ 20 A1EQJ C33 C20 C 0 1 N N N N N N -68.824 16.391 -26.661 -8.634 -1.398 -1.223 C33 A1EQJ 21 A1EQJ C4 C21 C 0 1 N N N N N N -57.186 9.633 -13.300 4.391 -5.319 -1.779 C4 A1EQJ 22 A1EQJ C5 C22 C 0 1 Y N N N N N -58.559 11.408 -16.988 4.021 -2.254 1.261 C5 A1EQJ 23 A1EQJ C6 C23 C 0 1 Y N N N N N -59.132 11.745 -18.200 3.891 -1.235 2.188 C6 A1EQJ 24 A1EQJ C8 C24 C 0 1 Y N N N N N -60.524 11.656 -18.472 3.603 0.052 1.763 C8 A1EQJ 25 A1EQJ C9 C25 C 0 1 Y N N N N N -61.340 11.193 -17.427 3.445 0.315 0.419 C9 A1EQJ 26 A1EQJ F7 F1 F 0 1 N N N N N N -58.296 12.183 -19.150 4.044 -1.494 3.505 F7 A1EQJ 27 A1EQJ N14 N1 N 0 1 N N N N N N -61.751 10.400 -15.290 3.369 -0.184 -1.810 N14 A1EQJ 28 A1EQJ N17 N2 N 0 1 N N N N N N -63.692 12.360 -17.420 1.824 2.115 0.046 N17 A1EQJ 29 A1EQJ N2 N3 N 0 1 N N N N N N -58.863 10.605 -14.718 3.996 -3.028 -1.023 N2 A1EQJ 30 A1EQJ N23 N4 N 0 1 N N N N N N -65.090 14.749 -20.015 -1.623 0.683 0.153 N23 A1EQJ 31 A1EQJ N29 N5 N 0 1 N N N N N N -68.388 16.719 -25.391 -7.662 -1.098 -0.328 N29 A1EQJ 32 A1EQJ N34 N6 N 0 1 N N N N N N -69.293 16.075 -27.682 -9.448 -1.649 -1.974 N34 A1EQJ 33 A1EQJ O32 O2 O 0 1 N N N N N N -67.269 14.231 -20.438 -2.811 1.468 1.854 O32 A1EQJ 34 A1EQJ H1 H1 H 0 1 N N N N N N -63.178 10.408 -19.427 4.030 3.495 -0.754 H1 A1EQJ 35 A1EQJ H2 H2 H 0 1 N N N N N N -64.433 9.813 -18.288 4.240 2.922 0.918 H2 A1EQJ 36 A1EQJ H3 H3 H 0 1 N N N N N N -63.053 7.950 -19.156 6.367 2.771 -0.349 H3 A1EQJ 37 A1EQJ H4 H4 H 0 1 N N N N N N -61.569 8.741 -18.524 5.785 1.155 0.119 H4 A1EQJ 38 A1EQJ H5 H5 H 0 1 N N N N N N -62.825 8.146 -17.386 5.574 1.727 -1.554 H5 A1EQJ 39 A1EQJ H6 H6 H 0 1 N N N N N N -63.002 13.062 -15.500 1.423 3.168 -1.727 H6 A1EQJ 40 A1EQJ H7 H7 H 0 1 N N N N N N -62.294 13.923 -16.909 2.353 4.071 -0.507 H7 A1EQJ 41 A1EQJ H8 H8 H 0 1 N N N N N N -63.987 15.331 -15.640 0.351 4.188 0.943 H8 A1EQJ 42 A1EQJ H9 H9 H 0 1 N N N N N N -65.249 14.116 -16.038 0.013 4.896 -0.655 H9 A1EQJ 43 A1EQJ H10 H10 H 0 1 N N N N N N -63.601 15.693 -18.082 -1.825 3.384 0.105 H10 A1EQJ 44 A1EQJ H11 H11 H 0 1 N N N N N N -65.297 16.049 -17.608 -1.049 2.792 -1.384 H11 A1EQJ 45 A1EQJ H12 H12 H 0 1 N N N N N N -66.017 13.805 -18.358 -0.457 1.840 1.457 H12 A1EQJ 46 A1EQJ H13 H13 H 0 1 N N N N N N -64.427 12.197 -19.423 1.021 0.198 0.341 H13 A1EQJ 47 A1EQJ H14 H14 H 0 1 N N N N N N -63.063 13.346 -19.212 0.655 0.934 -1.238 H14 A1EQJ 48 A1EQJ H15 H15 H 0 1 N N N N N N -67.322 13.709 -23.007 -5.005 -1.018 2.441 H15 A1EQJ 49 A1EQJ H16 H16 H 0 1 N N N N N N -65.902 14.113 -24.030 -5.086 0.771 2.135 H16 A1EQJ 50 A1EQJ H17 H17 H 0 1 N N N N N N -64.984 15.605 -22.352 -3.430 -1.354 0.594 H17 A1EQJ 51 A1EQJ H18 H18 H 0 1 N N N N N N -66.524 17.462 -22.555 -4.850 1.157 -0.554 H18 A1EQJ 52 A1EQJ H19 H19 H 0 1 N N N N N N -67.850 16.552 -21.754 -4.671 -0.477 -1.329 H19 A1EQJ 53 A1EQJ H20 H20 H 0 1 N N N N N N -66.433 15.773 -25.832 -5.979 -2.447 -0.474 H20 A1EQJ 54 A1EQJ H21 H21 H 0 1 N N N N N N -66.302 17.361 -25.004 -6.770 -2.388 1.162 H21 A1EQJ 55 A1EQJ H22 H22 H 0 1 N N N N N N -56.957 9.994 -15.448 3.512 -4.733 0.098 H22 A1EQJ 56 A1EQJ H23 H23 H 0 1 N N N N N N -56.941 11.484 -14.445 5.253 -4.388 -0.039 H23 A1EQJ 57 A1EQJ H24 H24 H 0 1 N N N N N N -69.523 16.179 -23.558 -7.805 0.148 1.434 H24 A1EQJ 58 A1EQJ H25 H25 H 0 1 N N N N N N -69.140 14.777 -24.614 -7.399 1.037 -0.099 H25 A1EQJ 59 A1EQJ H26 H26 H 0 1 N N N N N N -56.109 9.501 -13.120 3.439 -5.319 -2.310 H26 A1EQJ 60 A1EQJ H27 H27 H 0 1 N N N N N N -57.642 10.139 -12.437 5.180 -4.973 -2.447 H27 A1EQJ 61 A1EQJ H28 H28 H 0 1 N N N N N N -57.658 8.649 -13.440 4.618 -6.331 -1.442 H28 A1EQJ 62 A1EQJ H29 H29 H 0 1 N N N N N N -57.492 11.496 -16.845 4.245 -3.257 1.592 H29 A1EQJ 63 A1EQJ H30 H30 H 0 1 N N N N N N -60.933 11.930 -19.433 3.502 0.849 2.484 H30 A1EQJ 64 A1EQJ H31 H31 H 0 1 N N N N N N -61.588 10.102 -14.349 3.412 -0.719 -2.618 H31 A1EQJ 65 A1EQJ H33 H33 H 0 1 N N N N N N -59.173 11.296 -14.064 3.885 -2.845 -1.969 H33 A1EQJ 66 A1EQJ H34 H34 H 0 1 N N N N N N -64.268 15.189 -20.376 -1.544 0.045 -0.573 H34 A1EQJ 67 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1EQJ N34 C33 TRIP N N 1 A1EQJ C33 N29 SING N N 2 A1EQJ N29 C28 SING N N 3 A1EQJ N29 C30 SING N N 4 A1EQJ C28 C27 SING N N 5 A1EQJ C30 C27 SING N N 6 A1EQJ C27 C24 SING N N 7 A1EQJ C27 C26 SING N N 8 A1EQJ C24 C25 SING N N 9 A1EQJ C26 C25 SING N N 10 A1EQJ C25 C31 SING N N 11 A1EQJ C31 O32 DOUB N N 12 A1EQJ C31 N23 SING N N 13 A1EQJ N23 C21 SING N N 14 A1EQJ F7 C6 SING N N 15 A1EQJ C22 C21 SING N N 16 A1EQJ C22 N17 SING N N 17 A1EQJ C21 C20 SING N N 18 A1EQJ C8 C6 DOUB Y N 19 A1EQJ C8 C9 SING Y N 20 A1EQJ C15 C16 SING N N 21 A1EQJ C15 C10 SING N N 22 A1EQJ C6 C5 SING Y N 23 A1EQJ C20 C19 SING N N 24 A1EQJ C9 C10 SING N N 25 A1EQJ C9 C13 DOUB Y N 26 A1EQJ N17 C10 SING N N 27 A1EQJ N17 C18 SING N N 28 A1EQJ C10 C11 SING N N 29 A1EQJ C5 C1 DOUB Y N 30 A1EQJ C18 C19 SING N N 31 A1EQJ C13 C1 SING Y N 32 A1EQJ C13 N14 SING N N 33 A1EQJ C1 N2 SING N N 34 A1EQJ C11 O12 DOUB N N 35 A1EQJ C11 N14 SING N N 36 A1EQJ N2 C3 SING N N 37 A1EQJ C3 C4 SING N N 38 A1EQJ C15 H1 SING N N 39 A1EQJ C15 H2 SING N N 40 A1EQJ C16 H3 SING N N 41 A1EQJ C16 H4 SING N N 42 A1EQJ C16 H5 SING N N 43 A1EQJ C18 H6 SING N N 44 A1EQJ C18 H7 SING N N 45 A1EQJ C19 H8 SING N N 46 A1EQJ C19 H9 SING N N 47 A1EQJ C20 H10 SING N N 48 A1EQJ C20 H11 SING N N 49 A1EQJ C21 H12 SING N N 50 A1EQJ C22 H13 SING N N 51 A1EQJ C22 H14 SING N N 52 A1EQJ C24 H15 SING N N 53 A1EQJ C24 H16 SING N N 54 A1EQJ C25 H17 SING N N 55 A1EQJ C26 H18 SING N N 56 A1EQJ C26 H19 SING N N 57 A1EQJ C28 H20 SING N N 58 A1EQJ C28 H21 SING N N 59 A1EQJ C3 H22 SING N N 60 A1EQJ C3 H23 SING N N 61 A1EQJ C30 H24 SING N N 62 A1EQJ C30 H25 SING N N 63 A1EQJ C4 H26 SING N N 64 A1EQJ C4 H27 SING N N 65 A1EQJ C4 H28 SING N N 66 A1EQJ C5 H29 SING N N 67 A1EQJ C8 H30 SING N N 68 A1EQJ N14 H31 SING N N 69 A1EQJ N2 H33 SING N N 70 A1EQJ N23 H34 SING N N 71 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1EQJ InChI InChI 1.06 "InChI=1S/C25H33FN6O2/c1-3-25(19-8-17(26)9-20(28-4-2)21(19)30-23(25)34)32-7-5-6-18(12-32)29-22(33)16-10-24(11-16)13-31(14-24)15-27/h8-9,16,18,28H,3-7,10-14H2,1-2H3,(H,29,33)(H,30,34)/t18-,25+/m1/s1" A1EQJ InChIKey InChI 1.06 SXYDOCWKRRIRAC-CJAUYULYSA-N A1EQJ SMILES_CANONICAL CACTVS 3.385 "CCNc1cc(F)cc2c1NC(=O)[C@@]2(CC)N3CCC[C@H](C3)NC(=O)C4CC5(C4)CN(C5)C#N" A1EQJ SMILES CACTVS 3.385 "CCNc1cc(F)cc2c1NC(=O)[C]2(CC)N3CCC[CH](C3)NC(=O)C4CC5(C4)CN(C5)C#N" A1EQJ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC[C@@]1(c2cc(cc(c2NC1=O)NCC)F)N3CCC[C@H](C3)NC(=O)C4CC5(C4)CN(C5)C#N" A1EQJ SMILES "OpenEye OEToolkits" 2.0.7 "CCC1(c2cc(cc(c2NC1=O)NCC)F)N3CCCC(C3)NC(=O)C4CC5(C4)CN(C5)C#N" # _pdbx_chem_comp_identifier.comp_id A1EQJ _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-cyano-~{N}-[(3~{R})-1-[(3~{S})-3-ethyl-7-(ethylamino)-5-fluoranyl-2-oxidanylidene-1~{H}-indol-3-yl]piperidin-3-yl]-2-azaspiro[3.3]heptane-6-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1EQJ "Create component" 2025-05-15 PDBC A1EQJ "Initial release" 2025-06-25 RCSB #