data_A1ER6 # _chem_comp.id A1ER6 _chem_comp.name adenosylcobinamide-GDP _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C68 H93 Co N21 O21 P2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 2 _chem_comp.pdbx_initial_date 2025-06-20 _chem_comp.pdbx_modified_date 2025-10-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 1661.475 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1ER6 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag Y _chem_comp.pdbx_model_coordinates_db_code 9VIS _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBC _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1ER6 PB P1 P 0 1 N N N N N N 20.616 12.455 35.392 ? ? ? PB A1ER6 1 A1ER6 O1B O1 O 0 1 N N N N N N 21.816 13.077 34.793 ? ? ? O1B A1ER6 2 A1ER6 O2B O2 O 0 1 N N N N N N 20.064 11.211 34.815 ? ? ? O2B A1ER6 3 A1ER6 O3A O3 O 0 1 N N N N N N 20.988 12.153 36.917 ? ? ? O3A A1ER6 4 A1ER6 PA P2 P 0 1 N N N N N N 21.338 13.172 38.085 ? ? ? PA A1ER6 5 A1ER6 O1A O4 O 0 1 N N N N N N 22.131 12.470 39.126 ? ? ? O1A A1ER6 6 A1ER6 O2A O5 O 0 1 N N N N N N 21.847 14.436 37.493 ? ? ? O2A A1ER6 7 A1ER6 "O5'" O6 O 0 1 N N N N N N 19.865 13.397 38.658 ? ? ? "O5'" A1ER6 8 A1ER6 "C5'" C1 C 0 1 N N N N N N 19.740 14.404 39.676 ? ? ? "C5'" A1ER6 9 A1ER6 "C4'" C2 C 0 1 N N R N N N 18.361 14.382 40.284 ? ? ? "C4'" A1ER6 10 A1ER6 "O4'" O7 O 0 1 N N N N N N 18.207 13.219 41.123 ? ? ? "O4'" A1ER6 11 A1ER6 "C1'" C3 C 0 1 N N R N N N 16.986 13.479 41.808 ? ? ? "C1'" A1ER6 12 A1ER6 C4 C4 C 0 1 N N N N N N 12.856 11.754 26.578 ? ? ? C4 A1ER6 13 A1ER6 C2 C5 C 0 1 N N S N N N 13.467 10.364 28.403 ? ? ? C2 A1ER6 14 A1ER6 C6 C6 C 0 1 N N N N N N 12.078 13.658 25.108 ? ? ? C6 A1ER6 15 A1ER6 C5 C7 C 0 1 N N N N N N 12.273 12.254 25.382 ? ? ? C5 A1ER6 16 A1ER6 C8 C8 C 0 1 N N S N N N 11.962 15.676 23.879 ? ? ? C8 A1ER6 17 A1ER6 "C2'" C9 C 0 1 N N R N N N 16.908 14.986 42.073 ? ? ? "C2'" A1ER6 18 A1ER6 "O2'" O8 O 0 1 N N N N N N 15.652 15.510 41.700 ? ? ? "O2'" A1ER6 19 A1ER6 "C3'" C10 C 0 1 N N S N N N 18.061 15.542 41.232 ? ? ? "C3'" A1ER6 20 A1ER6 "O3'" O9 O 0 1 N N N N N N 17.740 16.744 40.542 ? ? ? "O3'" A1ER6 21 A1ER6 C1 C11 C 0 1 N N R N N N 13.913 11.859 28.641 ? ? ? C1 A1ER6 22 A1ER6 C10 C12 C 0 1 N N N N N N 12.281 17.112 26.010 ? ? ? C10 A1ER6 23 A1ER6 C11 C13 C 0 1 N N N N N N 12.640 17.348 27.323 ? ? ? C11 A1ER6 24 A1ER6 C12 C14 C 0 1 N N N N N N 12.590 18.706 27.993 ? ? ? C12 A1ER6 25 A1ER6 C13 C15 C 0 1 N N S N N N 13.431 18.444 29.238 ? ? ? C13 A1ER6 26 A1ER6 C14 C16 C 0 1 N N N N N N 13.321 16.933 29.385 ? ? ? C14 A1ER6 27 A1ER6 C15 C17 C 0 1 N N N N N N 13.607 16.243 30.604 ? ? ? C15 A1ER6 28 A1ER6 C16 C18 C 0 1 N N N N N N 13.711 14.806 30.660 ? ? ? C16 A1ER6 29 A1ER6 C17 C19 C 0 1 N N R N N N 14.044 13.955 31.883 ? ? ? C17 A1ER6 30 A1ER6 C18 C20 C 0 1 N N R N N N 14.429 12.641 31.180 ? ? ? C18 A1ER6 31 A1ER6 C19 C21 C 0 1 N N R N N N 13.534 12.618 29.947 ? ? ? C19 A1ER6 32 A1ER6 C1A C22 C 0 1 N N R N N N 8.880 12.446 29.948 ? ? ? C1A A1ER6 33 A1ER6 C1P C23 C 0 1 N N N N N N 19.742 15.357 33.739 ? ? ? C1P A1ER6 34 A1ER6 C20 C24 C 0 1 N N N N N N 15.380 12.135 28.325 ? ? ? C20 A1ER6 35 A1ER6 C25 C25 C 0 1 N N N N N N 14.389 9.296 28.990 ? ? ? C25 A1ER6 36 A1ER6 C26 C26 C 0 1 N N N N N N 12.083 10.135 28.990 ? ? ? C26 A1ER6 37 A1ER6 C27 C27 C 0 1 N N N N N N 11.547 8.719 28.865 ? ? ? C27 A1ER6 38 A1ER6 C2A C28 C 0 1 N N R N N N 8.282 13.686 29.282 ? ? ? C2A A1ER6 39 A1ER6 C2C C29 C 0 1 Y N N N N N 11.058 10.003 32.885 ? ? ? C2C A1ER6 40 A1ER6 C2G C30 C 0 1 N N N N N N 13.937 11.591 44.340 ? ? ? C2G A1ER6 41 A1ER6 C2P C31 C 0 1 N N R N N N 19.715 14.948 35.195 ? ? ? C2P A1ER6 42 A1ER6 C3 C32 C 0 1 N N S N N N 13.288 10.325 26.867 ? ? ? C3 A1ER6 43 A1ER6 C30 C33 C 0 1 N N N N N N 14.461 9.882 25.957 ? ? ? C30 A1ER6 44 A1ER6 C31 C34 C 0 1 N N N N N N 14.399 8.389 25.602 ? ? ? C31 A1ER6 45 A1ER6 C32 C35 C 0 1 N N N N N N 15.183 7.996 24.366 ? ? ? C32 A1ER6 46 A1ER6 C35 C36 C 0 1 N N N N N N 11.889 11.179 24.395 ? ? ? C35 A1ER6 47 A1ER6 C36 C37 C 0 1 N N N N N N 11.828 13.734 22.445 ? ? ? C36 A1ER6 48 A1ER6 C37 C38 C 0 1 N N N N N N 9.936 14.130 24.070 ? ? ? C37 A1ER6 49 A1ER6 C38 C39 C 0 1 N N N N N N 9.061 14.784 23.015 ? ? ? C38 A1ER6 50 A1ER6 C3A C40 C 0 1 N N S N N N 8.693 13.394 27.840 ? ? ? C3A A1ER6 51 A1ER6 C3P C41 C 0 1 N N N N N N 18.584 15.612 35.947 ? ? ? C3P A1ER6 52 A1ER6 C41 C42 C 0 1 N N N N N N 13.378 15.823 23.268 ? ? ? C41 A1ER6 53 A1ER6 C42 C43 C 0 1 N N N N N N 13.962 17.243 23.263 ? ? ? C42 A1ER6 54 A1ER6 C43 C44 C 0 1 N N N N N N 15.260 17.421 22.514 ? ? ? C43 A1ER6 55 A1ER6 C46 C45 C 0 1 N N N N N N 11.116 18.953 28.342 ? ? ? C46 A1ER6 56 A1ER6 C47 C46 C 0 1 N N N N N N 13.093 19.861 27.117 ? ? ? C47 A1ER6 57 A1ER6 C48 C47 C 0 1 N N N N N N 14.914 18.771 28.924 ? ? ? C48 A1ER6 58 A1ER6 C49 C48 C 0 1 N N N N N N 15.927 18.736 30.079 ? ? ? C49 A1ER6 59 A1ER6 C4A C49 C 0 1 N N S N N N 10.168 13.117 28.134 ? ? ? C4A A1ER6 60 A1ER6 C4D C50 C 0 1 Y N N N N N 9.849 11.712 32.193 ? ? ? C4D A1ER6 61 A1ER6 C4G C51 C 0 1 Y N N N N N 15.991 12.304 43.846 ? ? ? C4G A1ER6 62 A1ER6 C50 C52 C 0 1 N N N N N N 17.364 19.067 29.749 ? ? ? C50 A1ER6 63 A1ER6 C53 C53 C 0 1 N N N N N N 13.785 17.082 31.846 ? ? ? C53 A1ER6 64 A1ER6 C54 C54 C 0 1 N N N N N N 12.762 13.813 32.723 ? ? ? C54 A1ER6 65 A1ER6 C55 C55 C 0 1 N N N N N N 15.218 14.418 32.777 ? ? ? C55 A1ER6 66 A1ER6 C56 C56 C 0 1 N N N N N N 16.476 14.660 31.943 ? ? ? C56 A1ER6 67 A1ER6 C57 C57 C 0 1 N N N N N N 17.541 15.443 32.669 ? ? ? C57 A1ER6 68 A1ER6 C5A C58 C 0 1 N N N N N N 10.977 14.364 28.484 ? ? ? C5A A1ER6 69 A1ER6 C5E C59 C 0 1 Y N N N N N 9.806 12.265 33.460 ? ? ? C5E A1ER6 70 A1ER6 C5G C60 C 0 1 Y N N N N N 16.535 11.912 45.049 ? ? ? C5G A1ER6 71 A1ER6 C60 C61 C 0 1 N N N N N N 14.523 11.386 32.035 ? ? ? C60 A1ER6 72 A1ER6 C61 C62 C 0 1 N N N N N N 15.830 10.615 31.960 ? ? ? C61 A1ER6 73 A1ER6 C6A C63 C 0 1 Y N N N N N 10.474 11.570 34.488 ? ? ? C6A A1ER6 74 A1ER6 C6G C64 C 0 1 N N N N N N 15.708 11.286 46.016 ? ? ? C6G A1ER6 75 A1ER6 C7 C65 C 0 1 N N S N N N 11.444 14.244 23.847 ? ? ? C7 A1ER6 76 A1ER6 C8A C66 C 0 1 Y N N N N N 8.701 13.578 32.207 ? ? ? C8A A1ER6 77 A1ER6 C8G C67 C 0 1 Y N N N N N 18.133 12.789 43.947 ? ? ? C8G A1ER6 78 A1ER6 C9 C68 C 0 1 N N N N N N 12.174 15.892 25.358 ? ? ? C9 A1ER6 79 A1ER6 N0A N1 N 0 1 N N N N N N 10.523 11.984 35.757 ? ? ? N0A A1ER6 80 A1ER6 N1A N2 N 0 1 Y N N N N N 11.106 10.415 34.156 ? ? ? N1A A1ER6 81 A1ER6 N1G N3 N 0 1 N N N N N N 14.394 11.174 45.567 ? ? ? N1G A1ER6 82 A1ER6 N21 N4 N 1 1 N N S N N N 13.119 12.581 27.605 ? ? ? N21 A1ER6 83 A1ER6 N22 N5 N 1 1 N N R N N N 12.363 14.699 25.988 ? ? ? N22 A1ER6 84 A1ER6 N23 N6 N 0 1 N N N N N N 12.984 16.356 28.179 ? ? ? N23 A1ER6 85 A1ER6 N24 N7 N 0 1 N N R N N N 13.497 14.041 29.569 ? ? ? N24 A1ER6 86 A1ER6 N29 N8 N 0 1 N N N N N N 11.120 8.169 29.992 ? ? ? N29 A1ER6 87 A1ER6 N2G N9 N 0 1 N N N N N N 12.639 11.386 44.082 ? ? ? N2G A1ER6 88 A1ER6 N34 N10 N 0 1 N N N N N N 14.471 7.573 23.333 ? ? ? N34 A1ER6 89 A1ER6 N3A N11 N 0 1 Y N N N N N 10.462 10.566 31.837 ? ? ? N3A A1ER6 90 A1ER6 N3G N12 N 0 1 N N N N N N 14.709 12.175 43.425 ? ? ? N3G A1ER6 91 A1ER6 N40 N13 N 0 1 N N N N N N 9.125 16.101 22.874 ? ? ? N40 A1ER6 92 A1ER6 N45 N14 N 0 1 N N N N N N 15.226 18.267 21.496 ? ? ? N45 A1ER6 93 A1ER6 N52 N15 N 0 1 N N N N N N 18.223 19.004 30.757 ? ? ? N52 A1ER6 94 A1ER6 N59 N16 N 0 1 N N N N N N 18.627 14.759 33.025 ? ? ? N59 A1ER6 95 A1ER6 N63 N17 N 0 1 N N N N N N 15.875 9.455 32.599 ? ? ? N63 A1ER6 96 A1ER6 N7A N18 N 0 1 Y N N N N N 9.083 13.448 33.455 ? ? ? N7A A1ER6 97 A1ER6 N7G N19 N 0 1 Y N N N N N 17.891 12.221 45.103 ? ? ? N7G A1ER6 98 A1ER6 N9A N20 N 0 1 Y N N N N N 9.126 12.560 31.388 ? ? ? N9A A1ER6 99 A1ER6 N9G N21 N 0 1 Y N N N N N 17.034 12.864 43.132 ? ? ? N9G A1ER6 100 A1ER6 O28 O10 O 0 1 N N N N N N 11.504 8.118 27.782 ? ? ? O28 A1ER6 101 A1ER6 O33 O11 O 0 1 N N N N N N 16.417 8.075 24.335 ? ? ? O33 A1ER6 102 A1ER6 O39 O12 O 0 1 N N N N N N 8.308 14.085 22.326 ? ? ? O39 A1ER6 103 A1ER6 O3P O13 O 0 1 N N N N N N 19.454 13.505 35.270 ? ? ? O3P A1ER6 104 A1ER6 O44 O14 O 0 1 N N N N N N 16.286 16.817 22.850 ? ? ? O44 A1ER6 105 A1ER6 O51 O15 O 0 1 N N N N N N 17.703 19.368 28.601 ? ? ? O51 A1ER6 106 A1ER6 O58 O16 O 0 1 N N N N N N 17.409 16.638 32.925 ? ? ? O58 A1ER6 107 A1ER6 O62 O17 O 0 1 N N N N N N 16.799 11.065 31.337 ? ? ? O62 A1ER6 108 A1ER6 O6A O18 O 0 1 N N N N N N 10.121 12.270 29.293 ? ? ? O6A A1ER6 109 A1ER6 O6G O19 O 0 1 N N N N N N 16.017 10.885 47.149 ? ? ? O6G A1ER6 110 A1ER6 O7A O20 O 0 1 N N N N N N 6.895 13.814 29.500 ? ? ? O7A A1ER6 111 A1ER6 O8A O21 O 0 1 N N N N N N 8.034 12.216 27.408 ? ? ? O8A A1ER6 112 A1ER6 CO CO1 CO 0 0 N N N N N N 12.922 14.474 27.807 ? ? ? CO A1ER6 113 A1ER6 H1 H1 H 0 1 N N N N N N 20.592 10.945 34.071 ? ? ? H1 A1ER6 114 A1ER6 H2 H2 H 0 1 N N N N N N 22.929 12.956 39.298 ? ? ? H2 A1ER6 115 A1ER6 H3 H3 H 0 1 N N N N N N 20.484 14.215 40.464 ? ? ? H3 A1ER6 116 A1ER6 H4 H4 H 0 1 N N N N N N 19.922 15.393 39.229 ? ? ? H4 A1ER6 117 A1ER6 H5 H5 H 0 1 N N N N N N 17.610 14.372 39.480 ? ? ? H5 A1ER6 118 A1ER6 H6 H6 H 0 1 N N N N N N 16.109 13.142 41.236 ? ? ? H6 A1ER6 119 A1ER6 H8 H8 H 0 1 N N N N N N 11.248 16.391 23.444 ? ? ? H8 A1ER6 120 A1ER6 H9 H9 H 0 1 N N N N N N 17.112 15.177 43.137 ? ? ? H9 A1ER6 121 A1ER6 H10 H10 H 0 1 N N N N N N 14.975 15.134 42.250 ? ? ? H10 A1ER6 122 A1ER6 H11 H11 H 0 1 N N N N N N 18.931 15.699 41.886 ? ? ? H11 A1ER6 123 A1ER6 H12 H12 H 0 1 N N N N N N 17.562 17.433 41.171 ? ? ? H12 A1ER6 124 A1ER6 H13 H13 H 0 1 N N N N N N 12.056 17.986 25.417 ? ? ? H13 A1ER6 125 A1ER6 H14 H14 H 0 1 N N N N N N 13.062 18.985 30.122 ? ? ? H14 A1ER6 126 A1ER6 H16 H16 H 0 1 N N N N N N 15.446 12.808 30.797 ? ? ? H16 A1ER6 127 A1ER6 H17 H17 H 0 1 N N N N N N 12.527 12.297 30.251 ? ? ? H17 A1ER6 128 A1ER6 H18 H18 H 0 1 N N N N N N 8.220 11.588 29.753 ? ? ? H18 A1ER6 129 A1ER6 H19 H19 H 0 1 N N N N N N 20.686 15.020 33.285 ? ? ? H19 A1ER6 130 A1ER6 H20 H20 H 0 1 N N N N N N 19.672 16.453 33.669 ? ? ? H20 A1ER6 131 A1ER6 H21 H21 H 0 1 N N N N N N 16.017 11.624 29.062 ? ? ? H21 A1ER6 132 A1ER6 H22 H22 H 0 1 N N N N N N 15.614 11.762 27.317 ? ? ? H22 A1ER6 133 A1ER6 H23 H23 H 0 1 N N N N N N 15.567 13.218 28.368 ? ? ? H23 A1ER6 134 A1ER6 H24 H24 H 0 1 N N N N N N 14.443 9.417 30.082 ? ? ? H24 A1ER6 135 A1ER6 H25 H25 H 0 1 N N N N N N 13.993 8.298 28.751 ? ? ? H25 A1ER6 136 A1ER6 H26 H26 H 0 1 N N N N N N 15.395 9.404 28.559 ? ? ? H26 A1ER6 137 A1ER6 H27 H27 H 0 1 N N N N N N 12.122 10.390 30.059 ? ? ? H27 A1ER6 138 A1ER6 H28 H28 H 0 1 N N N N N N 11.381 10.810 28.478 ? ? ? H28 A1ER6 139 A1ER6 H29 H29 H 0 1 N N N N N N 8.818 14.579 29.636 ? ? ? H29 A1ER6 140 A1ER6 H30 H30 H 0 1 N N N N N N 11.578 9.079 32.679 ? ? ? H30 A1ER6 141 A1ER6 H31 H31 H 0 1 N N N N N N 20.676 15.192 35.671 ? ? ? H31 A1ER6 142 A1ER6 H32 H32 H 0 1 N N N N N N 12.435 9.665 26.650 ? ? ? H32 A1ER6 143 A1ER6 H33 H33 H 0 1 N N N N N N 15.408 10.081 26.480 ? ? ? H33 A1ER6 144 A1ER6 H34 H34 H 0 1 N N N N N N 14.426 10.468 25.026 ? ? ? H34 A1ER6 145 A1ER6 H35 H35 H 0 1 N N N N N N 13.345 8.120 25.439 ? ? ? H35 A1ER6 146 A1ER6 H36 H36 H 0 1 N N N N N N 14.795 7.818 26.454 ? ? ? H36 A1ER6 147 A1ER6 H37 H37 H 0 1 N N N N N N 12.128 10.191 24.816 ? ? ? H37 A1ER6 148 A1ER6 H38 H38 H 0 1 N N N N N N 10.810 11.238 24.190 ? ? ? H38 A1ER6 149 A1ER6 H39 H39 H 0 1 N N N N N N 12.449 11.324 23.459 ? ? ? H39 A1ER6 150 A1ER6 H40 H40 H 0 1 N N N N N N 11.490 12.694 22.327 ? ? ? H40 A1ER6 151 A1ER6 H41 H41 H 0 1 N N N N N N 11.348 14.364 21.682 ? ? ? H41 A1ER6 152 A1ER6 H42 H42 H 0 1 N N N N N N 12.920 13.781 22.325 ? ? ? H42 A1ER6 153 A1ER6 H43 H43 H 0 1 N N N N N N 9.702 14.596 25.039 ? ? ? H43 A1ER6 154 A1ER6 H44 H44 H 0 1 N N N N N N 9.680 13.061 24.106 ? ? ? H44 A1ER6 155 A1ER6 H45 H45 H 0 1 N N N N N N 8.552 14.261 27.178 ? ? ? H45 A1ER6 156 A1ER6 H46 H46 H 0 1 N N N N N N 18.602 15.288 36.998 ? ? ? H46 A1ER6 157 A1ER6 H47 H47 H 0 1 N N N N N N 18.703 16.704 35.898 ? ? ? H47 A1ER6 158 A1ER6 H48 H48 H 0 1 N N N N N N 17.624 15.327 35.492 ? ? ? H48 A1ER6 159 A1ER6 H49 H49 H 0 1 N N N N N N 13.921 14.979 22.870 ? ? ? H49 A1ER6 160 A1ER6 H50 H50 H 0 1 N N N N N N 13.473 18.065 23.765 ? ? ? H50 A1ER6 161 A1ER6 H51 H51 H 0 1 N N N N N N 10.745 18.130 28.970 ? ? ? H51 A1ER6 162 A1ER6 H52 H52 H 0 1 N N N N N N 11.023 19.903 28.889 ? ? ? H52 A1ER6 163 A1ER6 H53 H53 H 0 1 N N N N N N 10.524 19.003 27.416 ? ? ? H53 A1ER6 164 A1ER6 H54 H54 H 0 1 N N N N N N 13.022 20.805 27.678 ? ? ? H54 A1ER6 165 A1ER6 H55 H55 H 0 1 N N N N N N 14.141 19.679 26.836 ? ? ? H55 A1ER6 166 A1ER6 H56 H56 H 0 1 N N N N N N 12.476 19.927 26.208 ? ? ? H56 A1ER6 167 A1ER6 H57 H57 H 0 1 N N N N N N 15.227 19.017 27.920 ? ? ? H57 A1ER6 168 A1ER6 H58 H58 H 0 1 N N N N N N 15.624 18.485 31.085 ? ? ? H58 A1ER6 169 A1ER6 H59 H59 H 0 1 N N N N N N 10.629 12.599 27.280 ? ? ? H59 A1ER6 170 A1ER6 H60 H60 H 0 1 N N N N N N 13.999 16.427 32.704 ? ? ? H60 A1ER6 171 A1ER6 H61 H61 H 0 1 N N N N N N 14.623 17.780 31.700 ? ? ? H61 A1ER6 172 A1ER6 H62 H62 H 0 1 N N N N N N 12.863 17.651 32.039 ? ? ? H62 A1ER6 173 A1ER6 H63 H63 H 0 1 N N N N N N 12.972 13.203 33.614 ? ? ? H63 A1ER6 174 A1ER6 H64 H64 H 0 1 N N N N N N 12.416 14.809 33.035 ? ? ? H64 A1ER6 175 A1ER6 H65 H65 H 0 1 N N N N N N 11.981 13.326 32.121 ? ? ? H65 A1ER6 176 A1ER6 H66 H66 H 0 1 N N N N N N 14.937 15.353 33.285 ? ? ? H66 A1ER6 177 A1ER6 H67 H67 H 0 1 N N N N N N 15.427 13.641 33.527 ? ? ? H67 A1ER6 178 A1ER6 H68 H68 H 0 1 N N N N N N 16.191 15.217 31.038 ? ? ? H68 A1ER6 179 A1ER6 H69 H69 H 0 1 N N N N N N 16.896 13.685 31.657 ? ? ? H69 A1ER6 180 A1ER6 H70 H70 H 0 1 N N N N N N 11.007 14.437 29.581 ? ? ? H70 A1ER6 181 A1ER6 H71 H71 H 0 1 N N N N N N 10.438 15.230 28.073 ? ? ? H71 A1ER6 182 A1ER6 H72 H72 H 0 1 N N N N N N 14.369 11.682 33.083 ? ? ? H72 A1ER6 183 A1ER6 H73 H73 H 0 1 N N N N N N 13.715 10.707 31.723 ? ? ? H73 A1ER6 184 A1ER6 H74 H74 H 0 1 N N N N N N 8.107 14.409 31.856 ? ? ? H74 A1ER6 185 A1ER6 H75 H75 H 0 1 N N N N N N 19.106 13.162 43.664 ? ? ? H75 A1ER6 186 A1ER6 H77 H77 H 0 1 N N N N N N 11.054 11.333 36.300 ? ? ? H77 A1ER6 187 A1ER6 H78 H78 H 0 1 N N N N N N 10.957 12.884 35.797 ? ? ? H78 A1ER6 188 A1ER6 H79 H79 H 0 1 N N N N N N 13.730 10.757 46.187 ? ? ? H79 A1ER6 189 A1ER6 H80 H80 H 0 1 N N N N N N 10.749 7.241 29.986 ? ? ? H80 A1ER6 190 A1ER6 H81 H81 H 0 1 N N N N N N 11.169 8.682 30.849 ? ? ? H81 A1ER6 191 A1ER6 H82 H82 H 0 1 N N N N N N 12.252 11.671 43.205 ? ? ? H82 A1ER6 192 A1ER6 H83 H83 H 0 1 N N N N N N 12.056 10.948 44.766 ? ? ? H83 A1ER6 193 A1ER6 H84 H84 H 0 1 N N N N N N 14.930 7.303 22.487 ? ? ? H84 A1ER6 194 A1ER6 H85 H85 H 0 1 N N N N N N 13.474 7.524 23.399 ? ? ? H85 A1ER6 195 A1ER6 H86 H86 H 0 1 N N N N N N 8.553 16.559 22.194 ? ? ? H86 A1ER6 196 A1ER6 H87 H87 H 0 1 N N N N N N 9.745 16.636 23.448 ? ? ? H87 A1ER6 197 A1ER6 H88 H88 H 0 1 N N N N N N 16.054 18.440 20.962 ? ? ? H88 A1ER6 198 A1ER6 H89 H89 H 0 1 N N N N N N 14.373 18.733 21.261 ? ? ? H89 A1ER6 199 A1ER6 H90 H90 H 0 1 N N N N N N 19.190 19.205 30.603 ? ? ? H90 A1ER6 200 A1ER6 H91 H91 H 0 1 N N N N N N 17.903 18.756 31.671 ? ? ? H91 A1ER6 201 A1ER6 H92 H92 H 0 1 N N N N N N 18.677 13.788 32.790 ? ? ? H92 A1ER6 202 A1ER6 H93 H93 H 0 1 N N N N N N 16.714 8.910 32.588 ? ? ? H93 A1ER6 203 A1ER6 H94 H94 H 0 1 N N N N N N 15.070 9.124 33.092 ? ? ? H94 A1ER6 204 A1ER6 H7 H7 H 0 1 N N N N N N 6.734 13.994 30.419 ? ? ? H7 A1ER6 205 A1ER6 H15 H15 H 0 1 N N N N N N 7.121 12.410 27.231 ? ? ? H15 A1ER6 206 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1ER6 N45 C43 SING N N 1 A1ER6 O39 C38 DOUB N N 2 A1ER6 C36 C7 SING N N 3 A1ER6 C43 O44 DOUB N N 4 A1ER6 C43 C42 SING N N 5 A1ER6 N40 C38 SING N N 6 A1ER6 C38 C37 SING N N 7 A1ER6 C42 C41 DOUB N E 8 A1ER6 C41 C8 SING N N 9 A1ER6 N34 C32 SING N N 10 A1ER6 C7 C8 SING N N 11 A1ER6 C7 C37 SING N N 12 A1ER6 C7 C6 SING N N 13 A1ER6 C8 C9 SING N N 14 A1ER6 O33 C32 DOUB N N 15 A1ER6 C32 C31 SING N N 16 A1ER6 C35 C5 SING N N 17 A1ER6 C6 C5 DOUB N N 18 A1ER6 C6 N22 SING N N 19 A1ER6 C9 N22 DOUB N N 20 A1ER6 C9 C10 SING N N 21 A1ER6 C5 C4 SING N N 22 A1ER6 C31 C30 SING N N 23 A1ER6 C30 C3 SING N N 24 A1ER6 N22 CO SING N N 25 A1ER6 C10 C11 DOUB N N 26 A1ER6 C4 C3 SING N N 27 A1ER6 C4 N21 DOUB N N 28 A1ER6 C3 C2 SING N N 29 A1ER6 C47 C12 SING N N 30 A1ER6 C11 C12 SING N N 31 A1ER6 C11 N23 SING N N 32 A1ER6 O8A C3A SING N N 33 A1ER6 N21 CO SING N N 34 A1ER6 N21 C1 SING N N 35 A1ER6 O28 C27 DOUB N N 36 A1ER6 CO N23 SING N N 37 A1ER6 CO C5A SING N N 38 A1ER6 CO N24 SING N N 39 A1ER6 C3A C4A SING N N 40 A1ER6 C3A C2A SING N N 41 A1ER6 C12 C46 SING N N 42 A1ER6 C12 C13 SING N N 43 A1ER6 C4A C5A SING N N 44 A1ER6 C4A O6A SING N N 45 A1ER6 N23 C14 DOUB N N 46 A1ER6 C20 C1 SING N N 47 A1ER6 C2 C1 SING N N 48 A1ER6 C2 C26 SING N N 49 A1ER6 C2 C25 SING N N 50 A1ER6 O51 C50 DOUB N N 51 A1ER6 C1 C19 SING N N 52 A1ER6 C27 C26 SING N N 53 A1ER6 C27 N29 SING N N 54 A1ER6 C48 C13 SING N N 55 A1ER6 C48 C49 DOUB N E 56 A1ER6 C13 C14 SING N N 57 A1ER6 C2A O7A SING N N 58 A1ER6 C2A C1A SING N N 59 A1ER6 O6A C1A SING N N 60 A1ER6 C14 C15 SING N N 61 A1ER6 N24 C19 SING N N 62 A1ER6 N24 C16 SING N N 63 A1ER6 C50 C49 SING N N 64 A1ER6 C50 N52 SING N N 65 A1ER6 C19 C18 SING N N 66 A1ER6 C1A N9A SING N N 67 A1ER6 C15 C16 DOUB N N 68 A1ER6 C15 C53 SING N N 69 A1ER6 C16 C17 SING N N 70 A1ER6 C18 C17 SING N N 71 A1ER6 C18 C60 SING N N 72 A1ER6 O62 C61 DOUB N N 73 A1ER6 N9A C4D SING Y N 74 A1ER6 N9A C8A SING Y N 75 A1ER6 N3A C4D DOUB Y N 76 A1ER6 N3A C2C SING Y N 77 A1ER6 C17 C54 SING N N 78 A1ER6 C17 C55 SING N N 79 A1ER6 C56 C57 SING N N 80 A1ER6 C56 C55 SING N N 81 A1ER6 C61 C60 SING N N 82 A1ER6 C61 N63 SING N N 83 A1ER6 C4D C5E SING Y N 84 A1ER6 C8A N7A DOUB Y N 85 A1ER6 C57 O58 DOUB N N 86 A1ER6 C57 N59 SING N N 87 A1ER6 C2C N1A DOUB Y N 88 A1ER6 N59 C1P SING N N 89 A1ER6 N7A C5E SING Y N 90 A1ER6 C5E C6A DOUB Y N 91 A1ER6 C1P C2P SING N N 92 A1ER6 N1A C6A SING Y N 93 A1ER6 C6A N0A SING N N 94 A1ER6 O1B PB DOUB N N 95 A1ER6 O2B PB SING N N 96 A1ER6 C2P O3P SING N N 97 A1ER6 C2P C3P SING N N 98 A1ER6 O3P PB SING N N 99 A1ER6 PB O3A SING N N 100 A1ER6 O3A PA SING N N 101 A1ER6 O2A PA DOUB N N 102 A1ER6 PA "O5'" SING N N 103 A1ER6 PA O1A SING N N 104 A1ER6 "O5'" "C5'" SING N N 105 A1ER6 "C5'" "C4'" SING N N 106 A1ER6 "C4'" "O4'" SING N N 107 A1ER6 "C4'" "C3'" SING N N 108 A1ER6 "O3'" "C3'" SING N N 109 A1ER6 "O4'" "C1'" SING N N 110 A1ER6 "C3'" "C2'" SING N N 111 A1ER6 "O2'" "C2'" SING N N 112 A1ER6 "C1'" "C2'" SING N N 113 A1ER6 "C1'" N9G SING N N 114 A1ER6 N9G C4G SING Y N 115 A1ER6 N9G C8G SING Y N 116 A1ER6 N3G C4G SING N N 117 A1ER6 N3G C2G DOUB N N 118 A1ER6 C4G C5G DOUB Y N 119 A1ER6 C8G N7G DOUB Y N 120 A1ER6 N2G C2G SING N N 121 A1ER6 C2G N1G SING N N 122 A1ER6 C5G N7G SING Y N 123 A1ER6 C5G C6G SING N N 124 A1ER6 N1G C6G SING N N 125 A1ER6 C6G O6G DOUB N N 126 A1ER6 O2B H1 SING N N 127 A1ER6 O1A H2 SING N N 128 A1ER6 "C5'" H3 SING N N 129 A1ER6 "C5'" H4 SING N N 130 A1ER6 "C4'" H5 SING N N 131 A1ER6 "C1'" H6 SING N N 132 A1ER6 C8 H8 SING N N 133 A1ER6 "C2'" H9 SING N N 134 A1ER6 "O2'" H10 SING N N 135 A1ER6 "C3'" H11 SING N N 136 A1ER6 "O3'" H12 SING N N 137 A1ER6 C10 H13 SING N N 138 A1ER6 C13 H14 SING N N 139 A1ER6 C18 H16 SING N N 140 A1ER6 C19 H17 SING N N 141 A1ER6 C1A H18 SING N N 142 A1ER6 C1P H19 SING N N 143 A1ER6 C1P H20 SING N N 144 A1ER6 C20 H21 SING N N 145 A1ER6 C20 H22 SING N N 146 A1ER6 C20 H23 SING N N 147 A1ER6 C25 H24 SING N N 148 A1ER6 C25 H25 SING N N 149 A1ER6 C25 H26 SING N N 150 A1ER6 C26 H27 SING N N 151 A1ER6 C26 H28 SING N N 152 A1ER6 C2A H29 SING N N 153 A1ER6 C2C H30 SING N N 154 A1ER6 C2P H31 SING N N 155 A1ER6 C3 H32 SING N N 156 A1ER6 C30 H33 SING N N 157 A1ER6 C30 H34 SING N N 158 A1ER6 C31 H35 SING N N 159 A1ER6 C31 H36 SING N N 160 A1ER6 C35 H37 SING N N 161 A1ER6 C35 H38 SING N N 162 A1ER6 C35 H39 SING N N 163 A1ER6 C36 H40 SING N N 164 A1ER6 C36 H41 SING N N 165 A1ER6 C36 H42 SING N N 166 A1ER6 C37 H43 SING N N 167 A1ER6 C37 H44 SING N N 168 A1ER6 C3A H45 SING N N 169 A1ER6 C3P H46 SING N N 170 A1ER6 C3P H47 SING N N 171 A1ER6 C3P H48 SING N N 172 A1ER6 C41 H49 SING N N 173 A1ER6 C42 H50 SING N N 174 A1ER6 C46 H51 SING N N 175 A1ER6 C46 H52 SING N N 176 A1ER6 C46 H53 SING N N 177 A1ER6 C47 H54 SING N N 178 A1ER6 C47 H55 SING N N 179 A1ER6 C47 H56 SING N N 180 A1ER6 C48 H57 SING N N 181 A1ER6 C49 H58 SING N N 182 A1ER6 C4A H59 SING N N 183 A1ER6 C53 H60 SING N N 184 A1ER6 C53 H61 SING N N 185 A1ER6 C53 H62 SING N N 186 A1ER6 C54 H63 SING N N 187 A1ER6 C54 H64 SING N N 188 A1ER6 C54 H65 SING N N 189 A1ER6 C55 H66 SING N N 190 A1ER6 C55 H67 SING N N 191 A1ER6 C56 H68 SING N N 192 A1ER6 C56 H69 SING N N 193 A1ER6 C5A H70 SING N N 194 A1ER6 C5A H71 SING N N 195 A1ER6 C60 H72 SING N N 196 A1ER6 C60 H73 SING N N 197 A1ER6 C8A H74 SING N N 198 A1ER6 C8G H75 SING N N 199 A1ER6 N0A H77 SING N N 200 A1ER6 N0A H78 SING N N 201 A1ER6 N1G H79 SING N N 202 A1ER6 N29 H80 SING N N 203 A1ER6 N29 H81 SING N N 204 A1ER6 N2G H82 SING N N 205 A1ER6 N2G H83 SING N N 206 A1ER6 N34 H84 SING N N 207 A1ER6 N34 H85 SING N N 208 A1ER6 N40 H86 SING N N 209 A1ER6 N40 H87 SING N N 210 A1ER6 N45 H88 SING N N 211 A1ER6 N45 H89 SING N N 212 A1ER6 N52 H90 SING N N 213 A1ER6 N52 H91 SING N N 214 A1ER6 N59 H92 SING N N 215 A1ER6 N63 H93 SING N N 216 A1ER6 N63 H94 SING N N 217 A1ER6 O7A H7 SING N N 218 A1ER6 O8A H15 SING N N 219 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1ER6 InChI InChI 1.06 "InChI=1S/C58H82N16O18P2.C10H12N5O3.Co/c1-25(91-94(87,88)92-93(85,86)89-23-33-45(82)46(83)52(90-33)74-24-67-44-50(74)71-53(65)72-51(44)84)22-66-41(81)16-17-55(6)31(18-38(62)78)49-58(9)57(8,21-40(64)80)30(12-15-37(61)77)43(73-58)27(3)48-56(7,20-39(63)79)28(10-13-35(59)75)32(68-48)19-34-54(4,5)29(11-14-36(60)76)42(69-34)26(2)47(55)70-49;1-4-6(16)7(17)10(18-4)15-3-14-5-8(11)12-2-13-9(5)15;/h10-11,13-14,19,24-25,28-31,33,45-46,49,52,82-83H,12,15-18,20-23H2,1-9H3,(H19,59,60,61,62,63,64,65,66,68,69,70,71,72,73,75,76,77,78,79,80,81,84,85,86,87,88);2-4,6-7,10,16-17H,1H2,(H2,11,12,13);/q;;+3/p-1/b13-10+,14-11+;;/t25-,28-,29-,30-,31+,33-,45-,46-,49-,52-,55-,56+,57+,58+;4-,6-,7-,10-;/m11./s1" A1ER6 InChIKey InChI 1.06 LPFRQNISNASIDF-GNORBUJHSA-M A1ER6 SMILES_CANONICAL CACTVS 3.385 "C[C@H](CNC(=O)CC[C@]1(C)[C@@H](CC(N)=O)[C@H]2[N@@]3C1=C(C)C4=NC(=CC5=[N@@+]6C(=C(C)C7=[N@@+]([C@]2(C)[C@@](C)(CC(N)=O)[C@@H]7CCC(N)=O)[Co]36C[C@H]8O[C@H]([C@H](O)[C@@H]8O)n9cnc%10c(N)ncnc9%10)[C@@](C)(CC(N)=O)[C@@H]5/C=C/C(N)=O)C(C)(C)[C@@H]4\C=C\C(N)=O)O[P](O)(=O)O[P](O)(=O)OC[C@H]%11O[C@H]([C@H](O)[C@@H]%11O)n%12cnc%13C(=O)NC(=Nc%12%13)N" A1ER6 SMILES CACTVS 3.385 "C[CH](CNC(=O)CC[C]1(C)[CH](CC(N)=O)[CH]2[N]3C1=C(C)C4=NC(=CC5=[N+]6C(=C(C)C7=[N+]([C]2(C)[C](C)(CC(N)=O)[CH]7CCC(N)=O)[Co]36C[CH]8O[CH]([CH](O)[CH]8O)n9cnc%10c(N)ncnc9%10)[C](C)(CC(N)=O)[CH]5C=CC(N)=O)C(C)(C)[CH]4C=CC(N)=O)O[P](O)(=O)O[P](O)(=O)OC[CH]%11O[CH]([CH](O)[CH]%11O)n%12cnc%13C(=O)NC(=Nc%12%13)N" A1ER6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1=C2[C@@]([C@@H](C3=[N+]2[Co]45(N6[C@H]([C@@H]([C@@](C6=C(C7=[N]4C(=C3)C([C@@H]7/C=C/C(=O)N)(C)C)C)(C)CCC(=O)NC[C@@H](C)OP(=O)(O)OP(=O)(O)OC[C@@H]8[C@H]([C@H]([C@@H](O8)n9cnc2c9N=C(NC2=O)N)O)O)CC(=O)N)[C@@]2([N+]5=C1[C@H]([C@]2(C)CC(=O)N)CCC(=O)N)C)C[C@@H]1[C@H]([C@H]([C@@H](O1)n1cnc2c1ncnc2N)O)O)/C=C/C(=O)N)(C)CC(=O)N" A1ER6 SMILES "OpenEye OEToolkits" 2.0.7 "CC1=C2C(C(C3=[N+]2[Co]45(N6C(C(C(C6=C(C7=[N]4C(=C3)C(C7C=CC(=O)N)(C)C)C)(C)CCC(=O)NCC(C)OP(=O)(O)OP(=O)(O)OCC8C(C(C(O8)n9cnc2c9N=C(NC2=O)N)O)O)CC(=O)N)C2([N+]5=C1C(C2(C)CC(=O)N)CCC(=O)N)C)CC1C(C(C(O1)n1cnc2c1ncnc2N)O)O)C=CC(=O)N)(C)CC(=O)N" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1ER6 "Create component" 2025-06-20 PDBC A1ER6 "Initial release" 2025-10-08 RCSB #