data_A1EST # _chem_comp.id A1EST _chem_comp.name "(5Z)-3-(3H-benzimidazol-4-ylmethyl)-5-[[3,5-bis(fluoranyl)-4-oxidanyl-phenyl]methylidene]-2-methyl-imidazol-4-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H14 F2 N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-07-01 _chem_comp.pdbx_modified_date 2026-06-26 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 368.337 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1EST _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9VMZ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBC _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1EST CAA C1 C 0 1 Y N N N N N 9.022 11.923 22.554 -3.072 0.603 0.103 CAA A1EST 1 A1EST CAB C2 C 0 1 Y N N N N N 8.626 10.677 23.000 -2.851 -0.755 -0.167 CAB A1EST 2 A1EST CAC C3 C 0 1 Y N N N N N 9.558 9.710 23.257 -3.917 -1.663 -0.089 CAC A1EST 3 A1EST CAD C4 C 0 1 Y N N N N N 10.906 10.017 23.068 -5.175 -1.217 0.252 CAD A1EST 4 A1EST CAE C5 C 0 1 Y N N N N N 11.315 11.288 22.669 -5.389 0.133 0.519 CAE A1EST 5 A1EST CAF C6 C 0 1 Y N N N N N 10.360 12.225 22.395 -4.334 1.038 0.443 CAF A1EST 6 A1EST CAJ C7 C 0 1 N N N N N N 7.145 10.440 23.148 -1.511 -1.224 -0.530 CAJ A1EST 7 A1EST CAK C8 C 0 1 N N N N N N 6.637 9.184 23.846 -0.494 -0.316 -0.728 CAK A1EST 8 A1EST CAM C9 C 0 1 N N N N N N 6.433 7.250 24.783 0.605 1.556 -0.828 CAM A1EST 9 A1EST CAO C10 C 0 1 N N N N N N 5.282 8.916 24.100 0.874 -0.601 -1.194 CAO A1EST 10 A1EST CAQ C11 C 0 1 N N N N N N 3.981 7.083 25.148 2.884 0.834 -1.631 CAQ A1EST 11 A1EST CAR C12 C 0 1 Y N N N N N 3.500 7.646 26.507 3.779 0.739 -0.422 CAR A1EST 12 A1EST CAS C13 C 0 1 Y N N N N N 2.159 7.392 26.935 4.167 -0.503 0.062 CAS A1EST 13 A1EST CAT C14 C 0 1 Y N N N N N 1.709 7.876 28.143 5.001 -0.584 1.190 CAT A1EST 14 A1EST CAU C15 C 0 1 Y N N N N N 2.582 8.619 28.985 5.432 0.591 1.812 CAU A1EST 15 A1EST CAV C16 C 0 1 Y N N N N N 3.898 8.862 28.576 5.041 1.804 1.321 CAV A1EST 16 A1EST CAW C17 C 0 1 Y N N N N N 4.363 8.364 27.349 4.221 1.885 0.205 CAW A1EST 17 A1EST CAY C18 C 0 1 Y N N N N N 0.092 6.805 27.173 4.577 -2.617 0.549 CAY A1EST 18 A1EST CBA C19 C 0 1 N N N N N N 6.796 5.885 25.434 0.923 3.026 -0.734 CBA A1EST 19 A1EST FAG F1 F 0 1 N N N N N N 11.863 9.068 23.322 -6.203 -2.090 0.326 FAG A1EST 20 A1EST FAH F2 F 0 1 N N N N N N 10.786 13.441 21.952 -4.549 2.346 0.704 FAH A1EST 21 A1EST NAL N1 N 0 1 N N N N N N 7.314 8.140 24.270 -0.547 1.037 -0.538 NAL A1EST 22 A1EST NAN N2 N 0 1 N N N N N N 5.200 7.734 24.679 1.495 0.599 -1.229 NAN A1EST 23 A1EST NAX N3 N 0 1 Y N N N N N 1.133 6.712 26.367 3.915 -1.805 -0.320 NAX A1EST 24 A1EST NAZ N4 N 0 1 Y N N N N N 0.412 7.506 28.252 5.212 -1.903 1.432 NAZ A1EST 25 A1EST OAI O1 O 0 1 N N N N N N 12.685 11.617 22.497 -6.631 0.567 0.854 OAI A1EST 26 A1EST OAP O2 O 0 1 N N N N N N 4.195 9.750 23.837 1.345 -1.686 -1.484 OAP A1EST 27 A1EST HAA1 H1 H 0 0 N N N N N N 8.276 12.670 22.327 -2.254 1.305 0.049 HAA1 A1EST 28 A1EST HAC1 H2 H 0 0 N N N N N N 9.257 8.731 23.599 -3.752 -2.710 -0.297 HAC1 A1EST 29 A1EST HAJ2 H3 H 0 0 N N N N N N 6.442 11.162 22.759 -1.321 -2.281 -0.642 HAJ2 A1EST 30 A1EST HAQ1 H5 H 0 0 N N N N N N 3.188 7.236 24.401 2.972 1.827 -2.070 HAQ1 A1EST 31 A1EST HAQ2 H6 H 0 0 N N N N N N 4.176 6.006 25.260 3.182 0.084 -2.364 HAQ2 A1EST 32 A1EST HAU1 H7 H 0 0 N N N N N N 2.231 8.994 29.935 6.074 0.539 2.679 HAU1 A1EST 33 A1EST HAV1 H8 H 0 0 N N N N N N 4.559 9.436 29.208 5.376 2.710 1.804 HAV1 A1EST 34 A1EST HAW1 H9 H 0 0 N N N N N N 5.387 8.534 27.052 3.923 2.852 -0.174 HAW1 A1EST 35 A1EST HAY1 H10 H 0 0 N N N N N N -0.879 6.373 26.982 4.575 -3.696 0.511 HAY1 A1EST 36 A1EST HBA2 H11 H 0 0 N N N N N N 7.887 5.748 25.416 0.697 3.508 -1.685 HBA2 A1EST 37 A1EST HBA3 H12 H 0 0 N N N N N N 6.442 5.870 26.475 0.322 3.478 0.054 HBA3 A1EST 38 A1EST HBA1 H13 H 0 0 N N N N N N 6.315 5.071 24.871 1.981 3.155 -0.503 HBA1 A1EST 39 A1EST H1 H14 H 0 1 N N N N N N 1.160 6.227 25.493 3.368 -2.089 -1.069 H1 A1EST 40 A1EST HAI1 H16 H 0 0 N N N N N N 13.222 10.868 22.726 -6.810 0.553 1.804 HAI1 A1EST 41 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1EST CAA CAF DOUB Y N 1 A1EST CAA CAB SING Y N 2 A1EST CAF FAH SING N N 3 A1EST CAF CAE SING Y N 4 A1EST CAE OAI SING N N 5 A1EST CAE CAD DOUB Y N 6 A1EST CAD FAG SING N N 7 A1EST CAD CAC SING Y N 8 A1EST CAC CAB DOUB Y N 9 A1EST CAB CAJ SING N N 10 A1EST CAJ CAK DOUB N Z 11 A1EST CAK CAO SING N N 12 A1EST CAK NAL SING N N 13 A1EST CAO OAP DOUB N N 14 A1EST CAO NAN SING N N 15 A1EST NAL CAM DOUB N N 16 A1EST CAM CBA SING N N 17 A1EST CAM NAN SING N N 18 A1EST NAN CAQ SING N N 19 A1EST CAQ CAR SING N N 20 A1EST CAR CAS DOUB Y N 21 A1EST CAR CAW SING Y N 22 A1EST CAS NAX SING Y N 23 A1EST CAS CAT SING Y N 24 A1EST NAX CAY SING Y N 25 A1EST CAY NAZ DOUB Y N 26 A1EST NAZ CAT SING Y N 27 A1EST CAT CAU DOUB Y N 28 A1EST CAU CAV SING Y N 29 A1EST CAV CAW DOUB Y N 30 A1EST CAA HAA1 SING N N 31 A1EST CAC HAC1 SING N N 32 A1EST CAJ HAJ2 SING N N 33 A1EST CAQ HAQ1 SING N N 34 A1EST CAQ HAQ2 SING N N 35 A1EST CAU HAU1 SING N N 36 A1EST CAV HAV1 SING N N 37 A1EST CAW HAW1 SING N N 38 A1EST CAY HAY1 SING N N 39 A1EST CBA HBA2 SING N N 40 A1EST CBA HBA3 SING N N 41 A1EST CBA HBA1 SING N N 42 A1EST NAX H1 SING N N 43 A1EST OAI HAI1 SING N N 44 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1EST InChI InChI 1.06 "InChI=1S/C19H14F2N4O2/c1-10-24-16(7-11-5-13(20)18(26)14(21)6-11)19(27)25(10)8-12-3-2-4-15-17(12)23-9-22-15/h2-7,9,26H,8H2,1H3,(H,22,23)/b16-7-" A1EST InChIKey InChI 1.06 UDYSIBWBQGPNCS-APSNUPSMSA-N A1EST SMILES_CANONICAL CACTVS 3.385 "CC1=NC(=C/c2cc(F)c(O)c(F)c2)\C(=O)N1Cc3cccc4nc[nH]c34" A1EST SMILES CACTVS 3.385 "CC1=NC(=Cc2cc(F)c(O)c(F)c2)C(=O)N1Cc3cccc4nc[nH]c34" A1EST SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1=N/C(=C\c2cc(c(c(c2)F)O)F)/C(=O)N1Cc3cccc4c3[nH]cn4" A1EST SMILES "OpenEye OEToolkits" 2.0.7 "CC1=NC(=Cc2cc(c(c(c2)F)O)F)C(=O)N1Cc3cccc4c3[nH]cn4" # _pdbx_chem_comp_identifier.comp_id A1EST _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(5~{Z})-3-(3~{H}-benzimidazol-4-ylmethyl)-5-[[3,5-bis(fluoranyl)-4-oxidanyl-phenyl]methylidene]-2-methyl-imidazol-4-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1EST "Create component" 2025-07-01 PDBC A1EST "Initial release" 2026-07-01 RCSB #