data_A1EX0 # _chem_comp.id A1EX0 _chem_comp.name "7-(dimethylamino)-3-[4-[[7-[[4-[(2~{S},3~{R},4~{S},5~{R},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]sulfanylphenyl]amino]-2,1,3-benzoxadiazol-4-yl]sulfonyl]piperazin-1-yl]carbonyl-chromen-2-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C34 H36 N6 O11 S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-09-10 _chem_comp.pdbx_modified_date 2026-09-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 768.813 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1EX0 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9WNH _chem_comp.pdbx_subcomponent_list "GAL A1EXZ" _chem_comp.pdbx_processing_site PDBC _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1EX0 C1 C31 C 0 1 N N S N N N -14.219 11.673 34.304 -8.383 0.576 -0.062 C1 GAL 1 A1EX0 C2 C13 C 0 1 N N R N N N -12.782 11.150 34.238 -9.721 1.197 -0.469 C2 GAL 2 A1EX0 C3 C33 C 0 1 N N S N N N -12.509 9.988 35.187 -9.508 2.677 -0.802 C3 GAL 3 A1EX0 C4 C12 C 0 1 N N R N N N -13.296 10.147 36.480 -8.887 3.377 0.411 C4 GAL 4 A1EX0 C5 C32 C 0 1 N N R N N N -14.791 10.152 36.174 -7.581 2.672 0.785 C5 GAL 5 A1EX0 C6 C34 C 0 1 N N N N N N -15.547 10.854 37.301 -6.985 3.328 2.032 C6 GAL 6 A1EX0 O2 O10 O 0 1 N N N N N N -12.500 10.740 32.926 -10.233 0.519 -1.618 O2 GAL 7 A1EX0 O3 O9 O 0 1 N N N N N N -11.139 9.956 35.484 -10.764 3.283 -1.112 O3 GAL 8 A1EX0 O4 O8 O 0 1 N N N N N N -12.933 11.347 37.114 -9.794 3.317 1.513 O4 GAL 9 A1EX0 O5 O7 O 0 1 N N N N N N -15.127 10.726 34.895 -7.845 1.293 1.051 O5 GAL 10 A1EX0 O6 O11 O 0 1 N N N N N N -15.255 10.231 38.523 -5.710 2.747 2.312 O6 GAL 11 A1EX0 C01 C1 C 0 1 Y N N N N N -12.701 20.880 32.902 -0.038 -1.974 -1.311 C01 A1EXZ 12 A1EX0 C03 C2 C 0 1 Y N N N N N -14.143 19.596 31.283 -0.707 -3.082 0.812 C03 A1EXZ 13 A1EX0 C04 C3 C 0 1 Y N N N N N -13.489 18.370 31.526 -2.092 -2.745 0.505 C04 A1EXZ 14 A1EX0 C11 C4 C 0 1 Y N N N N N -8.794 26.601 42.516 10.864 0.477 0.983 C11 A1EXZ 15 A1EX0 C14 C5 C 0 1 Y N N N N N -10.148 24.894 40.716 8.575 1.214 -0.393 C14 A1EXZ 16 A1EX0 C17 C6 C 0 1 N N N N N N -11.937 23.008 41.814 6.365 1.704 1.133 C17 A1EXZ 17 A1EX0 C21 C7 C 0 1 N N N N N N -12.176 22.104 39.587 5.013 2.322 -0.959 C21 A1EXZ 18 A1EX0 C33 C8 C 0 1 N N N N N N -7.270 28.407 42.791 11.949 -0.227 3.089 C33 A1EXZ 19 A1EX0 C37 C9 C 0 1 Y N N N N N -14.867 16.465 32.874 -5.500 -3.508 1.302 C37 A1EXZ 20 A1EX0 C39 C10 C 0 1 Y N N N N N -14.088 14.432 33.910 -6.998 -1.737 0.692 C39 A1EXZ 21 A1EX0 C41 C11 C 0 1 Y N N N N N -12.993 15.272 31.918 -4.635 -1.331 0.751 C41 A1EXZ 22 A1EX0 N09 N1 N 0 1 Y N N N N N -15.160 19.874 30.457 -0.026 -3.685 1.749 N09 A1EXZ 23 A1EX0 O08 O1 O 0 1 Y N N N N N -15.399 21.232 30.601 1.153 -3.667 1.458 O08 A1EXZ 24 A1EX0 C02 C14 C 0 1 Y N N N N N -13.749 20.832 31.958 0.346 -2.669 -0.150 C02 A1EXZ 25 A1EX0 C05 C15 C 0 1 Y N N N N N -12.448 18.456 32.476 -2.360 -2.070 -0.653 C05 A1EXZ 26 A1EX0 C06 C16 C 0 1 Y N N N N N -12.070 19.648 33.131 -1.345 -1.692 -1.535 C06 A1EXZ 27 A1EX0 C10 C17 C 0 1 Y N N N N N -8.631 26.743 41.134 10.935 0.807 -0.373 C10 A1EXZ 28 A1EX0 C12 C18 C 0 1 Y N N N N N -9.638 25.596 42.989 9.644 0.493 1.648 C12 A1EXZ 29 A1EX0 C13 C19 C 0 1 Y N N N N N -10.308 24.754 42.095 8.493 0.849 0.966 C13 A1EXZ 30 A1EX0 C15 C20 C 0 1 Y N N N N N -9.301 25.901 40.237 9.812 1.161 -1.058 C15 A1EXZ 31 A1EX0 C18 C21 C 0 1 N N N N N N -11.804 23.181 40.327 6.269 1.894 -0.324 C18 A1EXZ 32 A1EX0 C19 C22 C 0 1 N N N N N N -10.864 23.996 39.818 7.416 1.653 -1.075 C19 A1EXZ 33 A1EX0 C25 C23 C 0 1 N N N N N N -13.232 21.078 37.546 4.557 -0.014 -1.530 C25 A1EXZ 34 A1EX0 C26 C24 C 0 1 N N N N N N -12.497 21.115 36.192 3.346 -0.776 -0.978 C26 A1EXZ 35 A1EX0 C28 C25 C 0 1 N N N N N N -12.560 23.530 36.251 1.819 1.083 -1.761 C28 A1EXZ 36 A1EX0 C29 C26 C 0 1 N N N N N N -13.223 23.432 37.646 3.030 1.845 -2.313 C29 A1EXZ 37 A1EX0 C34 C27 C 0 1 N N N N N N -8.321 27.247 44.778 13.308 0.108 0.972 C34 A1EXZ 38 A1EX0 C36 C28 C 0 1 Y N N N N N -13.888 16.345 31.883 -4.421 -2.647 1.140 C36 A1EXZ 39 A1EX0 C38 C29 C 0 1 Y N N N N N -14.963 15.514 33.885 -6.784 -3.055 1.076 C38 A1EXZ 40 A1EX0 C40 C30 C 0 1 Y N N N N N -13.098 14.317 32.932 -5.920 -0.875 0.535 C40 A1EXZ 41 A1EX0 N07 N2 N 0 1 Y N N N N N -14.539 21.818 31.517 1.441 -3.117 0.414 N07 A1EXZ 42 A1EX0 N20 N3 N 0 1 N N N N N N -8.172 27.372 43.319 12.019 0.126 1.669 N20 A1EXZ 43 A1EX0 N23 N4 N 0 1 N N N N N N -12.822 22.214 38.377 4.229 1.417 -1.578 N23 A1EXZ 44 A1EX0 N27 N5 N 0 1 N N N N N N -12.690 22.337 35.382 2.147 -0.349 -1.712 N27 A1EXZ 45 A1EX0 N35 N6 N 0 1 N N N N N N -13.797 17.254 31.002 -3.119 -3.106 1.369 N35 A1EXZ 46 A1EX0 O16 O2 O 0 1 N N N N N N -11.108 23.809 42.663 7.296 0.841 1.600 O16 A1EXZ 47 A1EX0 O22 O3 O 0 1 N N N N N N -12.710 22.215 42.296 5.630 2.306 1.894 O22 A1EXZ 48 A1EX0 O24 O4 O 0 1 N N N N N N -11.936 20.995 40.007 4.682 3.492 -0.926 O24 A1EXZ 49 A1EX0 O31 O5 O 0 1 N N N N N N -10.718 22.304 33.820 2.001 -2.595 -2.724 O31 A1EXZ 50 A1EX0 O32 O6 O 0 1 N N N N N N -12.608 23.549 33.084 0.493 -0.758 -3.497 O32 A1EXZ 51 A1EX0 S30 S1 S 0 1 N N N N N N -12.161 22.351 33.768 1.183 -1.460 -2.473 S30 A1EXZ 52 A1EX0 S42 S2 S 0 1 N N N N N N -14.259 13.223 35.254 -8.638 -1.159 0.402 S42 A1EXZ 53 A1EX0 H1 H27 H 0 1 N N N N N N -14.551 11.934 33.288 -7.687 0.630 -0.899 H1 GAL 54 A1EX0 H2 H7 H 0 1 N N N N N N -12.111 11.976 34.516 -10.430 1.107 0.354 H2 GAL 55 A1EX0 H3 H29 H 0 1 N N N N N N -12.818 9.052 34.698 -8.839 2.766 -1.658 H3 GAL 56 A1EX0 H4 H6 H 0 1 N N N N N N -13.075 9.290 37.133 -8.682 4.419 0.165 H4 GAL 57 A1EX0 H5 H28 H 0 1 N N N N N N -15.121 9.103 36.172 -6.874 2.753 -0.042 H5 GAL 58 A1EX0 H61 H30 H 0 1 N N N N N N -15.240 11.909 37.346 -6.867 4.397 1.859 H61 GAL 59 A1EX0 H62 H31 H 0 1 N N N N N N -16.628 10.794 37.109 -7.651 3.168 2.879 H62 GAL 60 A1EX0 HO2 H35 H 0 1 N Y N N N N -11.609 10.414 32.880 -10.387 -0.426 -1.480 HO2 GAL 61 A1EX0 HO3 H34 H 0 1 N Y N N N N -10.959 9.234 36.075 -11.217 2.884 -1.867 HO3 GAL 62 A1EX0 HO4 H33 H 0 1 N Y N N N N -13.427 11.442 37.920 -10.647 3.742 1.345 HO4 GAL 63 A1EX0 HO6 H36 H 0 1 N N N N N N -15.726 10.669 39.223 -5.273 3.116 3.092 HO6 GAL 64 A1EX0 H41 H1 H 0 1 N N N N N N -6.827 28.969 43.626 11.782 -1.299 3.189 H41 A1EXZ 65 A1EX0 H42 H2 H 0 1 N N N N N N -6.470 27.932 42.204 12.886 0.042 3.577 H42 A1EXZ 66 A1EX0 H43 H3 H 0 1 N N N N N N -7.838 29.095 42.147 11.127 0.315 3.558 H43 A1EXZ 67 A1EX0 H44 H4 H 0 1 N N N N N N -15.552 17.300 32.855 -5.333 -4.532 1.600 H44 A1EXZ 68 A1EX0 H45 H5 H 0 1 N N N N N N -12.224 15.182 31.165 -3.797 -0.661 0.629 H45 A1EXZ 69 A1EX0 H8 H8 H 0 1 N N N N N N -11.907 17.553 32.717 -3.383 -1.817 -0.889 H8 A1EXZ 70 A1EX0 H9 H9 H 0 1 N N N N N N -11.257 19.610 33.841 -1.613 -1.153 -2.431 H9 A1EXZ 71 A1EX0 H10 H10 H 0 1 N N N N N N -7.978 27.514 40.752 11.888 0.782 -0.881 H10 A1EXZ 72 A1EX0 H11 H11 H 0 1 N N N N N N -9.775 25.467 44.052 9.595 0.229 2.694 H11 A1EXZ 73 A1EX0 H12 H12 H 0 1 N N N N N N -9.164 26.029 39.173 9.874 1.413 -2.106 H12 A1EXZ 74 A1EX0 H13 H13 H 0 1 N N N N N N -10.643 23.986 38.761 7.420 1.797 -2.146 H13 A1EXZ 75 A1EX0 H14 H14 H 0 1 N N N N N N -14.317 21.128 37.372 5.416 -0.171 -0.877 H14 A1EXZ 76 A1EX0 H15 H15 H 0 1 N N N N N N -12.987 20.140 38.066 4.790 -0.371 -2.533 H15 A1EXZ 77 A1EX0 H16 H16 H 0 1 N N N N N N -12.845 20.258 35.597 3.495 -1.847 -1.112 H16 A1EXZ 78 A1EX0 H17 H17 H 0 1 N N N N N N -11.420 21.010 36.391 3.226 -0.554 0.083 H17 A1EXZ 79 A1EX0 H18 H18 H 0 1 N N N N N N -11.487 23.721 36.401 1.589 1.440 -0.757 H18 A1EXZ 80 A1EX0 H19 H19 H 0 1 N N N N N N -13.013 24.382 35.723 0.959 1.242 -2.412 H19 A1EXZ 81 A1EX0 H20 H20 H 0 1 N N N N N N -12.931 24.312 38.238 3.152 1.620 -3.373 H20 A1EXZ 82 A1EX0 H21 H21 H 0 1 N N N N N N -14.315 23.423 37.518 2.881 2.916 -2.178 H21 A1EXZ 83 A1EX0 H22 H22 H 0 1 N N N N N N -7.700 28.006 45.277 13.778 1.088 1.051 H22 A1EXZ 84 A1EX0 H23 H23 H 0 1 N N N N N N -9.375 27.398 45.053 13.955 -0.643 1.425 H23 A1EXZ 85 A1EX0 H24 H24 H 0 1 N N N N N N -7.999 26.244 45.095 13.150 -0.136 -0.079 H24 A1EXZ 86 A1EX0 H25 H25 H 0 1 N N N N N N -15.717 15.616 34.651 -7.622 -3.725 1.197 H25 A1EXZ 87 A1EX0 H26 H26 H 0 1 N N N N N N -12.410 13.485 32.960 -6.087 0.152 0.244 H26 A1EXZ 88 A1EX0 H32 H32 H 0 1 N N N N N N -13.948 17.111 30.024 -2.933 -3.677 2.132 H32 A1EXZ 89 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1EX0 N09 O08 SING Y N 1 A1EX0 N09 C03 DOUB Y N 2 A1EX0 O08 N07 SING Y N 3 A1EX0 N35 C04 SING N N 4 A1EX0 N35 C36 SING N N 5 A1EX0 C03 C04 SING Y N 6 A1EX0 C03 C02 SING Y N 7 A1EX0 N07 C02 DOUB Y N 8 A1EX0 C04 C05 DOUB Y N 9 A1EX0 C36 C41 DOUB Y N 10 A1EX0 C36 C37 SING Y N 11 A1EX0 C41 C40 SING Y N 12 A1EX0 C02 C01 SING Y N 13 A1EX0 C05 C06 SING Y N 14 A1EX0 C37 C38 DOUB Y N 15 A1EX0 C01 C06 DOUB Y N 16 A1EX0 C01 S30 SING N N 17 A1EX0 O2 C2 SING N N 18 A1EX0 C40 C39 DOUB Y N 19 A1EX0 O32 S30 DOUB N N 20 A1EX0 S30 O31 DOUB N N 21 A1EX0 S30 N27 SING N N 22 A1EX0 C38 C39 SING Y N 23 A1EX0 C39 S42 SING N N 24 A1EX0 C2 C1 SING N N 25 A1EX0 C2 C3 SING N N 26 A1EX0 C1 O5 SING N N 27 A1EX0 C1 S42 SING N N 28 A1EX0 O5 C5 SING N N 29 A1EX0 C3 O3 SING N N 30 A1EX0 C3 C4 SING N N 31 A1EX0 N27 C26 SING N N 32 A1EX0 N27 C28 SING N N 33 A1EX0 C5 C4 SING N N 34 A1EX0 C5 C6 SING N N 35 A1EX0 C26 C25 SING N N 36 A1EX0 C28 C29 SING N N 37 A1EX0 C4 O4 SING N N 38 A1EX0 C6 O6 SING N N 39 A1EX0 C25 N23 SING N N 40 A1EX0 C29 N23 SING N N 41 A1EX0 N23 C21 SING N N 42 A1EX0 C21 O24 DOUB N N 43 A1EX0 C21 C18 SING N N 44 A1EX0 C19 C18 DOUB N N 45 A1EX0 C19 C14 SING N N 46 A1EX0 C15 C14 DOUB Y N 47 A1EX0 C15 C10 SING Y N 48 A1EX0 C18 C17 SING N N 49 A1EX0 C14 C13 SING Y N 50 A1EX0 C10 C11 DOUB Y N 51 A1EX0 C17 O22 DOUB N N 52 A1EX0 C17 O16 SING N N 53 A1EX0 C13 O16 SING N N 54 A1EX0 C13 C12 DOUB Y N 55 A1EX0 C11 C12 SING Y N 56 A1EX0 C11 N20 SING N N 57 A1EX0 C33 N20 SING N N 58 A1EX0 N20 C34 SING N N 59 A1EX0 C33 H41 SING N N 60 A1EX0 C33 H42 SING N N 61 A1EX0 C33 H43 SING N N 62 A1EX0 C37 H44 SING N N 63 A1EX0 C41 H45 SING N N 64 A1EX0 C4 H4 SING N N 65 A1EX0 C2 H2 SING N N 66 A1EX0 C05 H8 SING N N 67 A1EX0 C06 H9 SING N N 68 A1EX0 C10 H10 SING N N 69 A1EX0 C12 H11 SING N N 70 A1EX0 C15 H12 SING N N 71 A1EX0 C19 H13 SING N N 72 A1EX0 C25 H14 SING N N 73 A1EX0 C25 H15 SING N N 74 A1EX0 C26 H16 SING N N 75 A1EX0 C26 H17 SING N N 76 A1EX0 C28 H18 SING N N 77 A1EX0 C28 H19 SING N N 78 A1EX0 C29 H20 SING N N 79 A1EX0 C29 H21 SING N N 80 A1EX0 C34 H22 SING N N 81 A1EX0 C34 H23 SING N N 82 A1EX0 C34 H24 SING N N 83 A1EX0 C38 H25 SING N N 84 A1EX0 C40 H26 SING N N 85 A1EX0 C1 H1 SING N N 86 A1EX0 C5 H5 SING N N 87 A1EX0 C3 H3 SING N N 88 A1EX0 C6 H61 SING N N 89 A1EX0 C6 H62 SING N N 90 A1EX0 N35 H32 SING N N 91 A1EX0 O4 HO4 SING N N 92 A1EX0 O3 HO3 SING N N 93 A1EX0 O2 HO2 SING N N 94 A1EX0 O6 HO6 SING N N 95 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1EX0 InChI InChI 1.06 "InChI=1S/C34H36N6O11S2/c1-38(2)20-6-3-18-15-22(33(46)49-24(18)16-20)32(45)39-11-13-40(14-12-39)53(47,48)26-10-9-23(27-28(26)37-51-36-27)35-19-4-7-21(8-5-19)52-34-31(44)30(43)29(42)25(17-41)50-34/h3-10,15-16,25,29-31,34-35,41-44H,11-14,17H2,1-2H3/t25-,29+,30+,31-,34+/m1/s1" A1EX0 InChIKey InChI 1.06 OJUOUQHBRHKSHK-VDMUGMGRSA-N A1EX0 SMILES_CANONICAL CACTVS 3.385 "CN(C)c1ccc2C=C(C(=O)Oc2c1)C(=O)N3CCN(CC3)[S](=O)(=O)c4ccc(Nc5ccc(S[C@@H]6O[C@H](CO)[C@H](O)[C@H](O)[C@H]6O)cc5)c7nonc47" A1EX0 SMILES CACTVS 3.385 "CN(C)c1ccc2C=C(C(=O)Oc2c1)C(=O)N3CCN(CC3)[S](=O)(=O)c4ccc(Nc5ccc(S[CH]6O[CH](CO)[CH](O)[CH](O)[CH]6O)cc5)c7nonc47" A1EX0 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN(C)c1ccc2c(c1)OC(=O)C(=C2)C(=O)N3CCN(CC3)S(=O)(=O)c4ccc(c5c4non5)Nc6ccc(cc6)S[C@H]7[C@@H]([C@H]([C@H]([C@H](O7)CO)O)O)O" A1EX0 SMILES "OpenEye OEToolkits" 2.0.7 "CN(C)c1ccc2c(c1)OC(=O)C(=C2)C(=O)N3CCN(CC3)S(=O)(=O)c4ccc(c5c4non5)Nc6ccc(cc6)SC7C(C(C(C(O7)CO)O)O)O" # _pdbx_chem_comp_identifier.comp_id A1EX0 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "7-(dimethylamino)-3-[4-[[7-[[4-[(2~{S},3~{R},4~{S},5~{R},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]sulfanylphenyl]amino]-2,1,3-benzoxadiazol-4-yl]sulfonyl]piperazin-1-yl]carbonyl-chromen-2-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1EX0 "Create component" 2025-09-10 PDBC A1EX0 "Modify internal type" 2025-09-16 PDBC A1EX0 "Initial release" 2026-09-09 RCSB #