data_A1EY6 # _chem_comp.id A1EY6 _chem_comp.name "(3~{R})-~{N}-[2-[[(~{R})-[4-(2-fluorophenyl)phenyl]-thiophen-2-yl-methyl]amino]-2-oxidanylidene-ethyl]pyrrolidine-3-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H24 F N3 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-10-16 _chem_comp.pdbx_modified_date 2025-10-24 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 437.530 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1EY6 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9X53 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBC _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1EY6 C4 C1 C 0 1 Y N N N N N 3.688 -8.044 15.430 -2.488 -0.206 -1.547 C4 A1EY6 1 A1EY6 C5 C2 C 0 1 Y N N N N N 2.470 -8.664 15.631 -1.640 -0.458 -0.483 C5 A1EY6 2 A1EY6 C6 C3 C 0 1 Y N N N N N 1.852 -9.361 14.612 -2.054 -0.204 0.813 C6 A1EY6 3 A1EY6 C7 C4 C 0 1 N N R N N N 1.787 -8.539 17.003 -0.262 -1.011 -0.736 C7 A1EY6 4 A1EY6 C8 C5 C 0 1 Y N N N N N 2.131 -9.683 17.935 -0.262 -2.497 -0.483 C8 A1EY6 5 A1EY6 C10 C6 C 0 1 Y N N N N N 4.660 -7.778 11.101 -5.980 2.217 -0.475 C10 A1EY6 6 A1EY6 C13 C7 C 0 1 Y N N N N N 5.277 -10.233 10.017 -7.627 1.007 1.399 C13 A1EY6 7 A1EY6 C17 C8 C 0 1 Y N N N N N 2.791 -11.823 18.705 -0.316 -4.739 -0.956 C17 A1EY6 8 A1EY6 C20 C9 C 0 1 N N N N N N -0.500 -7.462 16.986 1.999 -0.292 -0.178 C20 A1EY6 9 A1EY6 C22 C10 C 0 1 N N N N N N -2.005 -7.629 16.790 2.985 0.374 0.746 C22 A1EY6 10 A1EY6 C24 C11 C 0 1 N N N N N N -2.238 -5.992 14.933 5.372 0.861 0.806 C24 A1EY6 11 A1EY6 C28 C12 C 0 1 N N N N N N -1.508 -3.575 14.163 6.779 1.570 -1.153 C28 A1EY6 12 A1EY6 C1 C13 C 0 1 Y N N N N N 2.468 -9.464 13.364 -3.316 0.302 1.050 C1 A1EY6 13 A1EY6 C11 C14 C 0 1 Y N N N N N 5.268 -7.843 9.851 -7.249 2.714 -0.243 C11 A1EY6 14 A1EY6 C12 C15 C 0 1 Y N N N N N 5.577 -9.077 9.307 -8.069 2.111 0.692 C12 A1EY6 15 A1EY6 C14 C16 C 0 1 Y N N N N N 4.677 -10.169 11.264 -6.365 0.498 1.172 C14 A1EY6 16 A1EY6 C16 C17 C 0 1 Y N N N N N 2.492 -11.229 19.956 -0.232 -4.855 0.370 C16 A1EY6 17 A1EY6 C18 C18 C 0 1 Y N N N N N 2.587 -10.957 17.586 -0.332 -3.437 -1.427 C18 A1EY6 18 A1EY6 C2 C19 C 0 1 Y N N N N N 3.694 -8.844 13.165 -4.174 0.557 -0.018 C2 A1EY6 19 A1EY6 C25 C20 C 0 1 N N R N N N -2.785 -4.636 14.411 6.748 0.808 0.195 C25 A1EY6 20 A1EY6 C3 C21 C 0 1 Y N N N N N 4.307 -8.134 14.181 -3.750 0.305 -1.321 C3 A1EY6 21 A1EY6 C30 C22 C 0 1 N N N N N N -3.270 -3.257 12.680 8.669 2.322 0.052 C30 A1EY6 22 A1EY6 C31 C23 C 0 1 N N N N N N -3.380 -4.741 13.249 7.761 1.593 1.059 C31 A1EY6 23 A1EY6 C9 C24 C 0 1 Y N N N N N 4.373 -8.936 11.803 -5.532 1.100 0.231 C9 A1EY6 24 A1EY6 F27 F1 F 0 1 N N N N N N 4.347 -6.565 11.627 -5.178 2.807 -1.389 F27 A1EY6 25 A1EY6 N19 N1 N 0 1 N N N N N N 0.356 -8.620 16.818 0.697 -0.364 0.163 N19 A1EY6 26 A1EY6 N23 N2 N 0 1 N N N N N N -2.527 -6.373 16.298 4.323 0.323 0.152 N23 A1EY6 27 A1EY6 N29 N3 N 0 1 N N N N N N -1.979 -2.636 13.355 8.210 1.941 -1.301 N29 A1EY6 28 A1EY6 O21 O1 O 0 1 N N N N N N -0.047 -6.398 17.262 2.377 -0.763 -1.230 O21 A1EY6 29 A1EY6 O26 O2 O 0 1 N N N N N N -1.589 -6.701 14.240 5.207 1.388 1.886 O26 A1EY6 30 A1EY6 S15 S1 S 0 1 Y N N N N N 1.972 -9.651 19.641 -0.164 -3.256 1.100 S15 A1EY6 31 A1EY6 H1 H1 H 0 1 N N N N N N 4.158 -7.494 16.232 -2.160 -0.406 -2.556 H1 A1EY6 32 A1EY6 H2 H2 H 0 1 N N N N N N 0.892 -9.826 14.781 -1.388 -0.403 1.640 H2 A1EY6 33 A1EY6 H3 H3 H 0 1 N N N N N N 2.068 -7.582 17.467 0.023 -0.819 -1.770 H3 A1EY6 34 A1EY6 H4 H4 H 0 1 N N N N N N 5.515 -11.196 9.590 -8.273 0.540 2.128 H4 A1EY6 35 A1EY6 H5 H5 H 0 1 N N N N N N 3.142 -12.840 18.606 -0.370 -5.595 -1.612 H5 A1EY6 36 A1EY6 H6 H6 H 0 1 N N N N N N -2.482 -7.883 17.748 2.695 1.414 0.899 H6 A1EY6 37 A1EY6 H7 H7 H 0 1 N N N N N N -2.201 -8.428 16.060 2.992 -0.145 1.704 H7 A1EY6 38 A1EY6 H8 H8 H 0 1 N N N N N N -0.661 -4.096 13.694 6.464 0.920 -1.970 H8 A1EY6 39 A1EY6 H9 H9 H 0 1 N N N N N N -1.184 -3.134 15.117 6.151 2.460 -1.107 H9 A1EY6 40 A1EY6 H10 H10 H 0 1 N N N N N N 1.998 -10.018 12.565 -3.638 0.499 2.062 H10 A1EY6 41 A1EY6 H11 H11 H 0 1 N N N N N N 5.497 -6.937 9.310 -7.600 3.576 -0.791 H11 A1EY6 42 A1EY6 H12 H12 H 0 1 N N N N N N 6.048 -9.141 8.337 -9.060 2.502 0.871 H12 A1EY6 43 A1EY6 H13 H13 H 0 1 N N N N N N 4.450 -11.074 11.808 -6.023 -0.366 1.722 H13 A1EY6 44 A1EY6 H14 H14 H 0 1 N N N N N N 2.580 -11.695 20.926 -0.208 -5.789 0.913 H14 A1EY6 45 A1EY6 H15 H15 H 0 1 N N N N N N 2.769 -11.259 16.565 -0.397 -3.201 -2.479 H15 A1EY6 46 A1EY6 H16 H16 H 0 1 N N N N N N -3.436 -4.194 15.180 7.070 -0.225 0.062 H16 A1EY6 47 A1EY6 H17 H17 H 0 1 N N N N N N 5.258 -7.652 14.010 -4.410 0.502 -2.153 H17 A1EY6 48 A1EY6 H18 H18 H 0 1 N N N N N N -3.161 -3.273 11.586 8.580 3.401 0.185 H18 A1EY6 49 A1EY6 H19 H19 H 0 1 N N N N N N -4.163 -2.675 12.951 9.705 2.013 0.194 H19 A1EY6 50 A1EY6 H20 H20 H 0 1 N N N N N N -4.430 -5.047 13.365 7.241 2.314 1.691 H20 A1EY6 51 A1EY6 H21 H21 H 0 1 N N N N N N -2.859 -5.458 12.597 8.348 0.908 1.671 H21 A1EY6 52 A1EY6 H22 H22 H 0 1 N N N N N N -0.054 -9.497 16.568 0.395 0.014 1.004 H22 A1EY6 53 A1EY6 H23 H23 H 0 1 N N N N N N -3.076 -5.781 16.889 4.454 -0.099 -0.711 H23 A1EY6 54 A1EY6 H24 H24 H 0 1 N N N N N N -1.300 -2.403 12.659 8.320 2.707 -1.949 H24 A1EY6 55 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1EY6 C12 C11 DOUB Y N 1 A1EY6 C12 C13 SING Y N 2 A1EY6 C11 C10 SING Y N 3 A1EY6 C13 C14 DOUB Y N 4 A1EY6 C10 F27 SING N N 5 A1EY6 C10 C9 DOUB Y N 6 A1EY6 C14 C9 SING Y N 7 A1EY6 C9 C2 SING N N 8 A1EY6 C30 C31 SING N N 9 A1EY6 C30 N29 SING N N 10 A1EY6 C2 C1 DOUB Y N 11 A1EY6 C2 C3 SING Y N 12 A1EY6 C31 C25 SING N N 13 A1EY6 N29 C28 SING N N 14 A1EY6 C1 C6 SING Y N 15 A1EY6 C28 C25 SING N N 16 A1EY6 C3 C4 DOUB Y N 17 A1EY6 O26 C24 DOUB N N 18 A1EY6 C25 C24 SING N N 19 A1EY6 C6 C5 DOUB Y N 20 A1EY6 C24 N23 SING N N 21 A1EY6 C4 C5 SING Y N 22 A1EY6 C5 C7 SING N N 23 A1EY6 N23 C22 SING N N 24 A1EY6 C22 C20 SING N N 25 A1EY6 N19 C20 SING N N 26 A1EY6 N19 C7 SING N N 27 A1EY6 C20 O21 DOUB N N 28 A1EY6 C7 C8 SING N N 29 A1EY6 C18 C8 DOUB Y N 30 A1EY6 C18 C17 SING Y N 31 A1EY6 C8 S15 SING Y N 32 A1EY6 C17 C16 DOUB Y N 33 A1EY6 S15 C16 SING Y N 34 A1EY6 C4 H1 SING N N 35 A1EY6 C6 H2 SING N N 36 A1EY6 C7 H3 SING N N 37 A1EY6 C13 H4 SING N N 38 A1EY6 C17 H5 SING N N 39 A1EY6 C22 H6 SING N N 40 A1EY6 C22 H7 SING N N 41 A1EY6 C28 H8 SING N N 42 A1EY6 C28 H9 SING N N 43 A1EY6 C1 H10 SING N N 44 A1EY6 C11 H11 SING N N 45 A1EY6 C12 H12 SING N N 46 A1EY6 C14 H13 SING N N 47 A1EY6 C16 H14 SING N N 48 A1EY6 C18 H15 SING N N 49 A1EY6 C25 H16 SING N N 50 A1EY6 C3 H17 SING N N 51 A1EY6 C30 H18 SING N N 52 A1EY6 C30 H19 SING N N 53 A1EY6 C31 H20 SING N N 54 A1EY6 C31 H21 SING N N 55 A1EY6 N19 H22 SING N N 56 A1EY6 N23 H23 SING N N 57 A1EY6 N29 H24 SING N N 58 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1EY6 InChI InChI 1.06 "InChI=1S/C24H24FN3O2S/c25-20-5-2-1-4-19(20)16-7-9-17(10-8-16)23(21-6-3-13-31-21)28-22(29)15-27-24(30)18-11-12-26-14-18/h1-10,13,18,23,26H,11-12,14-15H2,(H,27,30)(H,28,29)/t18-,23-/m1/s1" A1EY6 InChIKey InChI 1.06 ZBHGBRUXINJSFI-WZONZLPQSA-N A1EY6 SMILES_CANONICAL CACTVS 3.385 "Fc1ccccc1c2ccc(cc2)[C@@H](NC(=O)CNC(=O)[C@@H]3CCNC3)c4sccc4" A1EY6 SMILES CACTVS 3.385 "Fc1ccccc1c2ccc(cc2)[CH](NC(=O)CNC(=O)[CH]3CCNC3)c4sccc4" A1EY6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(c(c1)c2ccc(cc2)[C@H](c3cccs3)NC(=O)CNC(=O)[C@@H]4CCNC4)F" A1EY6 SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(c(c1)c2ccc(cc2)C(c3cccs3)NC(=O)CNC(=O)C4CCNC4)F" # _pdbx_chem_comp_identifier.comp_id A1EY6 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(3~{R})-~{N}-[2-[[(~{R})-[4-(2-fluorophenyl)phenyl]-thiophen-2-yl-methyl]amino]-2-oxidanylidene-ethyl]pyrrolidine-3-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1EY6 "Create component" 2025-10-16 PDBC A1EY6 "Initial release" 2025-10-29 RCSB #