data_A1EZP # _chem_comp.id A1EZP _chem_comp.name "3-[3-[[2-[(2-chlorophenyl)amino]-5-[[(1~{S})-1-phenylpropyl]carbamoyl]pyrimidin-4-yl]amino]propylcarbamothioylamino]propanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H32 Cl N7 O3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-10-31 _chem_comp.pdbx_modified_date 2026-10-23 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 570.106 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1EZP _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9XBT _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBC _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1EZP O01 O1 O 0 1 N N N N N N 0.219 -11.430 33.678 1.212 -2.551 0.106 O01 A1EZP 1 A1EZP C02 C1 C 0 1 N N N N N N 1.076 -12.242 33.792 2.274 -1.974 -0.031 C02 A1EZP 2 A1EZP N03 N1 N 0 1 N N N N N N 2.023 -12.427 32.694 3.411 -2.682 -0.176 N03 A1EZP 3 A1EZP C04 C2 C 0 1 N N S N N N 1.927 -11.659 31.469 3.368 -4.147 -0.169 C04 A1EZP 4 A1EZP C05 C3 C 0 1 Y N N N N N 2.580 -12.497 30.357 4.707 -4.687 0.265 C05 A1EZP 5 A1EZP C06 C4 C 0 1 Y N N N N N 1.971 -13.680 29.958 4.771 -5.780 1.108 C06 A1EZP 6 A1EZP C07 C5 C 0 1 Y N N N N N 2.533 -14.474 28.964 5.999 -6.274 1.507 C07 A1EZP 7 A1EZP C08 C6 C 0 1 Y N N N N N 3.722 -14.098 28.359 7.162 -5.676 1.061 C08 A1EZP 8 A1EZP C09 C7 C 0 1 Y N N N N N 4.354 -12.933 28.765 7.098 -4.583 0.218 C09 A1EZP 9 A1EZP C10 C8 C 0 1 Y N N N N N 3.788 -12.132 29.759 5.871 -4.092 -0.185 C10 A1EZP 10 A1EZP C11 C9 C 0 1 N N N N N N 2.602 -10.308 31.685 3.046 -4.654 -1.576 C11 A1EZP 11 A1EZP C12 C10 C 0 1 N N N N N N 2.351 -9.381 30.502 1.635 -4.210 -1.967 C12 A1EZP 12 A1EZP C13 C11 C 0 1 Y N N N N N 1.206 -13.058 35.091 2.316 -0.503 -0.044 C13 A1EZP 13 A1EZP C14 C12 C 0 1 Y N N N N N 0.218 -12.999 36.074 1.127 0.257 -0.002 C14 A1EZP 14 A1EZP N15 N2 N 0 1 N N N N N N -1.000 -12.203 35.920 -0.102 -0.365 0.052 N15 A1EZP 15 A1EZP C16 C13 C 0 1 N N N N N N -2.331 -12.830 36.096 -1.330 0.432 -0.018 C16 A1EZP 16 A1EZP C17 C14 C 0 1 N N N N N N -2.864 -12.592 37.498 -2.545 -0.495 0.063 C17 A1EZP 17 A1EZP C18 C15 C 0 1 N N N N N N -2.927 -13.862 38.368 -3.827 0.337 -0.010 C18 A1EZP 18 A1EZP N19 N3 N 0 1 N N N N N N -1.598 -14.100 38.955 -4.990 -0.551 0.068 N19 A1EZP 19 A1EZP C20 C16 C 0 1 N N N N N N -1.354 -14.410 40.346 -6.234 -0.036 0.022 C20 A1EZP 20 A1EZP N21 N4 N 0 1 N N N N N N -2.556 -14.484 41.153 -7.304 -0.853 0.094 N21 A1EZP 21 A1EZP C22 C17 C 0 1 N N N N N N -2.509 -14.783 42.554 -8.657 -0.293 0.045 C22 A1EZP 22 A1EZP C23 C18 C 0 1 N N N N N N -3.046 -16.184 42.715 -9.682 -1.426 0.144 C23 A1EZP 23 A1EZP C24 C19 C 0 1 N N N N N N -3.024 -16.490 44.201 -11.073 -0.850 0.093 C24 A1EZP 24 A1EZP O25 O2 O 0 1 N N N N N N -2.743 -15.567 45.001 -12.139 -1.663 0.165 O25 A1EZP 25 A1EZP O26 O3 O 0 1 N N N N N N -3.304 -17.622 44.642 -11.230 0.343 -0.012 O26 A1EZP 26 A1EZP S27 S1 S 0 1 N N N N N N 0.177 -14.657 40.906 -6.457 1.655 -0.127 S27 A1EZP 27 A1EZP N28 N5 N 0 1 Y N N N N N 0.407 -13.698 37.165 1.214 1.582 -0.016 N28 A1EZP 28 A1EZP C29 C20 C 0 1 Y N N N N N 1.481 -14.457 37.336 2.394 2.184 -0.068 C29 A1EZP 29 A1EZP N30 N6 N 0 1 N N N N N N 1.611 -15.232 38.573 2.441 3.563 -0.081 N30 A1EZP 30 A1EZP C31 C21 C 0 1 Y N N N N N 2.788 -16.063 38.756 3.663 4.220 -0.261 C31 A1EZP 31 A1EZP C32 C22 C 0 1 Y N N N N N 3.795 -15.612 39.589 3.839 5.509 0.228 C32 A1EZP 32 A1EZP CL33 CL1 CL 0 0 N N N N N N 3.622 -14.050 40.441 2.543 6.307 1.062 CL33 A1EZP 33 A1EZP C34 C23 C 0 1 Y N N N N N 4.922 -16.398 39.766 5.049 6.154 0.049 C34 A1EZP 34 A1EZP C35 C24 C 0 1 Y N N N N N 5.037 -17.620 39.123 6.081 5.518 -0.615 C35 A1EZP 35 A1EZP C36 C25 C 0 1 Y N N N N N 4.024 -18.067 38.298 5.908 4.235 -1.102 C36 A1EZP 36 A1EZP C37 C26 C 0 1 Y N N N N N 2.897 -17.294 38.104 4.704 3.582 -0.922 C37 A1EZP 37 A1EZP N38 N7 N 0 1 Y N N N N N 2.441 -14.526 36.434 3.531 1.501 -0.108 N38 A1EZP 38 A1EZP C39 C27 C 0 1 Y N N N N N 2.334 -13.841 35.307 3.536 0.181 -0.092 C39 A1EZP 39 A1EZP H031 H1 H 0 0 N N N N N N 2.756 -13.101 32.791 4.258 -2.223 -0.286 H031 A1EZP 40 A1EZP H041 H2 H 0 0 N N N N N N 0.870 -11.493 31.212 2.598 -4.484 0.525 H041 A1EZP 41 A1EZP H061 H3 H 0 0 N N N N N N 1.048 -13.988 30.426 3.862 -6.247 1.456 H061 A1EZP 42 A1EZP H071 H4 H 0 0 N N N N N N 2.041 -15.387 28.662 6.049 -7.128 2.166 H071 A1EZP 43 A1EZP H081 H5 H 0 0 N N N N N N 4.152 -14.707 27.578 8.122 -6.060 1.376 H081 A1EZP 44 A1EZP H091 H6 H 0 0 N N N N N N 5.290 -12.643 28.310 8.008 -4.115 -0.130 H091 A1EZP 45 A1EZP H101 H7 H 0 0 N N N N N N 4.287 -11.225 30.067 5.821 -3.238 -0.845 H101 A1EZP 46 A1EZP H111 H8 H 0 0 N N N N N N 3.685 -10.461 31.800 3.765 -4.244 -2.284 H111 A1EZP 47 A1EZP H112 H9 H 0 0 N N N N N N 2.198 -9.845 32.598 3.101 -5.743 -1.591 H112 A1EZP 48 A1EZP H122 H10 H 0 0 N N N N N N 2.846 -8.415 30.681 0.915 -4.620 -1.259 H122 A1EZP 49 A1EZP H121 H11 H 0 0 N N N N N N 2.756 -9.837 29.587 1.579 -3.122 -1.952 H121 A1EZP 50 A1EZP H123 H12 H 0 0 N N N N N N 1.269 -9.222 30.384 1.405 -4.572 -2.969 H123 A1EZP 51 A1EZP H151 H13 H 0 0 N N N N N N -0.943 -11.459 36.586 -0.154 -1.329 0.137 H151 A1EZP 52 A1EZP H161 H14 H 0 0 N N N N N N -3.032 -12.397 35.367 -1.354 1.136 0.813 H161 A1EZP 53 A1EZP H162 H15 H 0 0 N N N N N N -2.244 -13.913 35.923 -1.354 0.980 -0.960 H162 A1EZP 54 A1EZP H172 H16 H 0 0 N N N N N N -2.210 -11.862 37.998 -2.520 -1.200 -0.768 H172 A1EZP 55 A1EZP H171 H17 H 0 0 N N N N N N -3.880 -12.178 37.416 -2.521 -1.043 1.005 H171 A1EZP 56 A1EZP H182 H18 H 0 0 N N N N N N -3.667 -13.724 39.171 -3.851 1.041 0.821 H182 A1EZP 57 A1EZP H181 H19 H 0 0 N N N N N N -3.216 -14.722 37.746 -3.851 0.885 -0.952 H181 A1EZP 58 A1EZP H191 H20 H 0 0 N N N N N N -0.806 -14.043 38.347 -4.864 -1.509 0.152 H191 A1EZP 59 A1EZP H211 H21 H 0 0 N N N N N N -3.443 -14.322 40.720 -7.179 -1.811 0.179 H211 A1EZP 60 A1EZP H221 H22 H 0 0 N N N N N N -1.473 -14.730 42.919 -8.796 0.396 0.877 H221 A1EZP 61 A1EZP H222 H23 H 0 0 N N N N N N -3.132 -14.071 43.115 -8.796 0.240 -0.896 H222 A1EZP 62 A1EZP H231 H24 H 0 0 N N N N N N -4.075 -16.242 42.331 -9.543 -2.115 -0.688 H231 A1EZP 63 A1EZP H232 H25 H 0 0 N N N N N N -2.411 -16.899 42.171 -9.543 -1.959 1.085 H232 A1EZP 64 A1EZP H1 H26 H 0 1 N N N N N N -2.789 -15.894 45.892 -13.011 -1.248 0.128 H1 A1EZP 65 A1EZP H301 H27 H 0 0 N N N N N N 0.903 -15.189 39.278 1.626 4.077 0.034 H301 A1EZP 66 A1EZP H341 H28 H 0 0 N N N N N N 5.718 -16.055 40.411 5.187 7.156 0.428 H341 A1EZP 67 A1EZP H351 H29 H 0 0 N N N N N N 5.921 -18.224 39.267 7.025 6.024 -0.754 H351 A1EZP 68 A1EZP H361 H30 H 0 0 N N N N N N 4.114 -19.023 37.804 6.717 3.741 -1.621 H361 A1EZP 69 A1EZP H371 H31 H 0 0 N N N N N N 2.106 -17.638 37.454 4.570 2.581 -1.303 H371 A1EZP 70 A1EZP H391 H32 H 0 0 N N N N N N 3.115 -13.890 34.563 4.468 -0.364 -0.120 H391 A1EZP 71 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1EZP C08 C09 DOUB Y N 1 A1EZP C08 C07 SING Y N 2 A1EZP C09 C10 SING Y N 3 A1EZP C07 C06 DOUB Y N 4 A1EZP C10 C05 DOUB Y N 5 A1EZP C06 C05 SING Y N 6 A1EZP C05 C04 SING N N 7 A1EZP C12 C11 SING N N 8 A1EZP C04 C11 SING N N 9 A1EZP C04 N03 SING N N 10 A1EZP N03 C02 SING N N 11 A1EZP O01 C02 DOUB N N 12 A1EZP C02 C13 SING N N 13 A1EZP C13 C39 DOUB Y N 14 A1EZP C13 C14 SING Y N 15 A1EZP C39 N38 SING Y N 16 A1EZP N15 C14 SING N N 17 A1EZP N15 C16 SING N N 18 A1EZP C14 N28 DOUB Y N 19 A1EZP C16 C17 SING N N 20 A1EZP N38 C29 DOUB Y N 21 A1EZP N28 C29 SING Y N 22 A1EZP C29 N30 SING N N 23 A1EZP C17 C18 SING N N 24 A1EZP C37 C36 DOUB Y N 25 A1EZP C37 C31 SING Y N 26 A1EZP C36 C35 SING Y N 27 A1EZP C18 N19 SING N N 28 A1EZP N30 C31 SING N N 29 A1EZP C31 C32 DOUB Y N 30 A1EZP N19 C20 SING N N 31 A1EZP C35 C34 DOUB Y N 32 A1EZP C32 C34 SING Y N 33 A1EZP C32 CL33 SING N N 34 A1EZP C20 S27 DOUB N N 35 A1EZP C20 N21 SING N N 36 A1EZP N21 C22 SING N N 37 A1EZP C22 C23 SING N N 38 A1EZP C23 C24 SING N N 39 A1EZP C24 O26 DOUB N N 40 A1EZP C24 O25 SING N N 41 A1EZP N03 H031 SING N N 42 A1EZP C04 H041 SING N N 43 A1EZP C06 H061 SING N N 44 A1EZP C07 H071 SING N N 45 A1EZP C08 H081 SING N N 46 A1EZP C09 H091 SING N N 47 A1EZP C10 H101 SING N N 48 A1EZP C11 H111 SING N N 49 A1EZP C11 H112 SING N N 50 A1EZP C12 H122 SING N N 51 A1EZP C12 H121 SING N N 52 A1EZP C12 H123 SING N N 53 A1EZP N15 H151 SING N N 54 A1EZP C16 H161 SING N N 55 A1EZP C16 H162 SING N N 56 A1EZP C17 H172 SING N N 57 A1EZP C17 H171 SING N N 58 A1EZP C18 H182 SING N N 59 A1EZP C18 H181 SING N N 60 A1EZP N19 H191 SING N N 61 A1EZP N21 H211 SING N N 62 A1EZP C22 H221 SING N N 63 A1EZP C22 H222 SING N N 64 A1EZP C23 H231 SING N N 65 A1EZP C23 H232 SING N N 66 A1EZP O25 H1 SING N N 67 A1EZP N30 H301 SING N N 68 A1EZP C34 H341 SING N N 69 A1EZP C35 H351 SING N N 70 A1EZP C36 H361 SING N N 71 A1EZP C37 H371 SING N N 72 A1EZP C39 H391 SING N N 73 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1EZP InChI InChI 1.06 "InChI=1S/C27H32ClN7O3S/c1-2-21(18-9-4-3-5-10-18)33-25(38)19-17-32-26(34-22-12-7-6-11-20(22)28)35-24(19)29-14-8-15-30-27(39)31-16-13-23(36)37/h3-7,9-12,17,21H,2,8,13-16H2,1H3,(H,33,38)(H,36,37)(H2,30,31,39)(H2,29,32,34,35)/t21-/m0/s1" A1EZP InChIKey InChI 1.06 JKUFINLZPLTWFZ-NRFANRHFSA-N A1EZP SMILES_CANONICAL CACTVS 3.385 "CC[C@H](NC(=O)c1cnc(Nc2ccccc2Cl)nc1NCCCNC(=S)NCCC(O)=O)c3ccccc3" A1EZP SMILES CACTVS 3.385 "CC[CH](NC(=O)c1cnc(Nc2ccccc2Cl)nc1NCCCNC(=S)NCCC(O)=O)c3ccccc3" A1EZP SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC[C@@H](c1ccccc1)NC(=O)c2cnc(nc2NCCCNC(=S)NCCC(=O)O)Nc3ccccc3Cl" A1EZP SMILES "OpenEye OEToolkits" 2.0.7 "CCC(c1ccccc1)NC(=O)c2cnc(nc2NCCCNC(=S)NCCC(=O)O)Nc3ccccc3Cl" # _pdbx_chem_comp_identifier.comp_id A1EZP _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "3-[3-[[2-[(2-chlorophenyl)amino]-5-[[(1~{S})-1-phenylpropyl]carbamoyl]pyrimidin-4-yl]amino]propylcarbamothioylamino]propanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1EZP "Create component" 2025-10-31 PDBC A1EZP "Initial release" 2026-10-28 RCSB #