data_A1H04 # _chem_comp.id A1H04 _chem_comp.name "[(5~{S})-5-azanyl-4-[[[(2~{S})-2-azanyl-3-methyl-butanoyl]amino]methyl]-6-oxidanyl-6-oxidanylidene-hexyl]-$l^{3}-oxidanyl-bis(oxidanyl)boron" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H27 B N3 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge -1 _chem_comp.pdbx_initial_date 2023-12-20 _chem_comp.pdbx_modified_date 2024-11-22 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 320.170 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1H04 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8RIM _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1H04 C1 C1 C 0 1 N N N N N N -33.964 -21.215 -5.607 6.083 0.716 -0.956 C1 A1H04 1 A1H04 C2 C2 C 0 1 N N N N N N -35.426 -19.740 -4.205 4.920 0.302 1.215 C2 A1H04 2 A1H04 C3 C3 C 0 1 N N N N N N -34.294 -19.766 -5.243 4.735 0.415 -0.299 C3 A1H04 3 A1H04 O5 O1 O 0 1 N N N N N N -32.160 -16.913 -5.490 2.128 1.786 1.085 O5 A1H04 4 A1H04 C7 C4 C 0 1 N N N N N N -32.592 -17.994 -5.861 2.425 1.250 0.038 C7 A1H04 5 A1H04 C12 C5 C 0 1 N N N N N N -32.379 -17.372 -8.292 0.276 0.103 0.084 C12 A1H04 6 A1H04 C13 C6 C 0 1 N N N N N N -30.569 -14.472 -11.156 -4.123 -0.033 0.190 C13 A1H04 7 A1H04 C14 C7 C 0 1 N N N N N N -31.575 -19.632 -10.630 0.284 -2.813 0.587 C14 A1H04 8 A1H04 C15 C8 C 0 1 N N S N N N -30.944 -19.224 -9.320 0.244 -2.233 -0.803 C15 A1H04 9 A1H04 C16 C9 C 0 1 N N S N N N -31.043 -17.718 -8.979 -0.500 -0.896 -0.777 C16 A1H04 10 A1H04 N4 N1 N 0 1 N N N N N N -33.032 -18.474 -3.469 4.282 2.812 -0.084 N4 A1H04 11 A1H04 C6 C10 C 0 1 N N S N N N -32.990 -19.042 -4.832 3.753 1.547 -0.609 C6 A1H04 12 A1H04 O8 O2 O 0 1 N N N N N N -28.684 -13.169 -10.351 -4.361 2.277 0.884 O8 A1H04 13 A1H04 O9 O3 O 0 1 N N N N N N -29.764 -12.250 -11.976 -4.960 1.764 -1.205 O9 A1H04 14 A1H04 B10 B1 B -1 1 N N N N N N -29.935 -13.016 -10.855 -4.949 1.330 0.092 B10 A1H04 15 A1H04 N11 N2 N 0 1 N N N N N N -32.709 -18.286 -7.183 1.567 0.391 -0.546 N11 A1H04 16 A1H04 C17 C11 C 0 1 N N N N N N -30.785 -16.815 -10.197 -1.896 -1.102 -0.187 C17 A1H04 17 A1H04 C18 C12 C 0 1 N N N N N N -30.739 -15.317 -9.871 -2.687 0.205 -0.281 C18 A1H04 18 A1H04 O19 O4 O 0 1 N N N N N N -32.882 -19.413 -10.835 1.186 -2.366 1.475 O19 A1H04 19 A1H04 O20 O5 O 0 1 N N N N N N -30.906 -20.160 -11.492 -0.496 -3.680 0.902 O20 A1H04 20 A1H04 N21 N3 N 0 1 N N N N N N -29.561 -19.706 -9.277 -0.451 -3.163 -1.703 N21 A1H04 21 A1H04 O22 O6 O 0 1 N N N N N N -30.726 -12.321 -9.973 -6.232 1.117 0.512 O22 A1H04 22 A1H04 H1 H1 H 0 1 N N N N N N -34.886 -21.739 -5.901 6.476 1.655 -0.567 H1 A1H04 23 A1H04 H2 H2 H 0 1 N N N N N N -33.251 -21.229 -6.445 6.783 -0.090 -0.735 H2 A1H04 24 A1H04 H3 H3 H 0 1 N N N N N N -33.518 -21.719 -4.737 5.952 0.797 -2.036 H3 A1H04 25 A1H04 H4 H4 H 0 1 N N N N N N -35.662 -18.698 -3.945 5.620 -0.504 1.436 H4 A1H04 26 A1H04 H5 H5 H 0 1 N N N N N N -36.320 -20.224 -4.625 5.313 1.241 1.605 H5 A1H04 27 A1H04 H6 H6 H 0 1 N N N N N N -35.107 -20.280 -3.301 3.960 0.087 1.684 H6 A1H04 28 A1H04 H7 H7 H 0 1 N N N N N N -34.669 -19.274 -6.152 4.342 -0.524 -0.688 H7 A1H04 29 A1H04 H8 H8 H 0 1 N N N N N N -32.315 -16.348 -7.895 -0.298 1.026 0.175 H8 A1H04 30 A1H04 H9 H9 H 0 1 N N N N N N -33.183 -17.425 -9.041 0.441 -0.322 1.074 H9 A1H04 31 A1H04 H10 H10 H 0 1 N N N N N N -31.555 -14.338 -11.624 -4.115 -0.379 1.223 H10 A1H04 32 A1H04 H11 H11 H 0 1 N N N N N N -29.905 -15.011 -11.848 -4.592 -0.788 -0.442 H11 A1H04 33 A1H04 H12 H12 H 0 1 N N N N N N -31.495 -19.753 -8.529 1.262 -2.075 -1.160 H12 A1H04 34 A1H04 H14 H14 H 0 1 N N N N N N -33.296 -19.186 -2.819 3.683 3.586 -0.333 H14 A1H04 35 A1H04 H15 H15 H 0 1 N N N N N N -32.128 -18.120 -3.227 4.413 2.763 0.915 H15 A1H04 36 A1H04 H17 H17 H 0 1 N N N N N N -32.198 -19.805 -4.839 3.621 1.628 -1.688 H17 A1H04 37 A1H04 H18 H18 H 0 1 N N N N N N -28.722 -13.696 -9.562 -3.447 2.479 0.642 H18 A1H04 38 A1H04 H20 H20 H 0 1 N N N N N N -33.047 -19.196 -7.424 1.804 -0.037 -1.383 H20 A1H04 39 A1H04 H21 H21 H 0 1 N N N N N N -31.589 -16.984 -10.928 -2.415 -1.881 -0.744 H21 A1H04 40 A1H04 H22 H22 H 0 1 N N N N N N -29.820 -17.101 -10.640 -1.809 -1.399 0.858 H22 A1H04 41 A1H04 H23 H23 H 0 1 N N N N N N -29.891 -15.122 -9.198 -2.696 0.551 -1.314 H23 A1H04 42 A1H04 H24 H24 H 0 1 N N N N N N -31.677 -15.029 -9.373 -2.218 0.960 0.351 H24 A1H04 43 A1H04 H25 H25 H 0 1 N N N N N N -33.125 -19.727 -11.698 1.173 -2.769 2.354 H25 A1H04 44 A1H04 H26 H26 H 0 1 N N N N N N -29.141 -19.437 -8.410 0.070 -4.020 -1.809 H26 A1H04 45 A1H04 H27 H27 H 0 1 N N N N N N -29.553 -20.703 -9.356 -1.388 -3.347 -1.378 H27 A1H04 46 A1H04 H29 H29 H 0 1 N N N N N N -30.856 -12.839 -9.187 -6.711 0.456 -0.006 H29 A1H04 47 A1H04 H16 H16 H 0 1 N N N N N N -29.390 -11.411 -11.733 -5.445 2.590 -1.339 H16 A1H04 48 A1H04 H13 H13 H 0 1 N N N N N N -30.247 -17.505 -8.251 -0.588 -0.509 -1.793 H13 A1H04 49 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1H04 O9 B10 SING N N 1 A1H04 O20 C14 DOUB N N 2 A1H04 C13 B10 SING N N 3 A1H04 C13 C18 SING N N 4 A1H04 B10 O8 SING N N 5 A1H04 B10 O22 SING N N 6 A1H04 O19 C14 SING N N 7 A1H04 C14 C15 SING N N 8 A1H04 C17 C18 SING N N 9 A1H04 C17 C16 SING N N 10 A1H04 C15 N21 SING N N 11 A1H04 C15 C16 SING N N 12 A1H04 C16 C12 SING N N 13 A1H04 C12 N11 SING N N 14 A1H04 N11 C7 SING N N 15 A1H04 C7 O5 DOUB N N 16 A1H04 C7 C6 SING N N 17 A1H04 C1 C3 SING N N 18 A1H04 C3 C6 SING N N 19 A1H04 C3 C2 SING N N 20 A1H04 C6 N4 SING N N 21 A1H04 C1 H1 SING N N 22 A1H04 C1 H2 SING N N 23 A1H04 C1 H3 SING N N 24 A1H04 C2 H4 SING N N 25 A1H04 C2 H5 SING N N 26 A1H04 C2 H6 SING N N 27 A1H04 C3 H7 SING N N 28 A1H04 C12 H8 SING N N 29 A1H04 C12 H9 SING N N 30 A1H04 C13 H10 SING N N 31 A1H04 C13 H11 SING N N 32 A1H04 C15 H12 SING N N 33 A1H04 N4 H14 SING N N 34 A1H04 N4 H15 SING N N 35 A1H04 C6 H17 SING N N 36 A1H04 O8 H18 SING N N 37 A1H04 N11 H20 SING N N 38 A1H04 C17 H21 SING N N 39 A1H04 C17 H22 SING N N 40 A1H04 C18 H23 SING N N 41 A1H04 C18 H24 SING N N 42 A1H04 O19 H25 SING N N 43 A1H04 N21 H26 SING N N 44 A1H04 N21 H27 SING N N 45 A1H04 O22 H29 SING N N 46 A1H04 O9 H16 SING N N 47 A1H04 C16 H13 SING N N 48 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1H04 InChI InChI 1.06 "InChI=1S/C12H27BN3O6/c1-7(2)9(14)11(17)16-6-8(10(15)12(18)19)4-3-5-13(20,21)22/h7-10,20-22H,3-6,14-15H2,1-2H3,(H,16,17)(H,18,19)/q-1/t8-,9-,10-/m0/s1" A1H04 InChIKey InChI 1.06 OFEFMXQRUGBNSS-GUBZILKMSA-N A1H04 SMILES_CANONICAL CACTVS 3.385 "CC(C)[C@H](N)C(=O)NC[C@H](CCC[B-](O)(O)O)[C@H](N)C(O)=O" A1H04 SMILES CACTVS 3.385 "CC(C)[CH](N)C(=O)NC[CH](CCC[B-](O)(O)O)[CH](N)C(O)=O" A1H04 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "[B-](CCC[C@@H](CNC(=O)[C@H](C(C)C)N)[C@@H](C(=O)O)N)(O)(O)O" A1H04 SMILES "OpenEye OEToolkits" 2.0.7 "[B-](CCCC(CNC(=O)C(C(C)C)N)C(C(=O)O)N)(O)(O)O" # _pdbx_chem_comp_identifier.comp_id A1H04 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[(4~{S},5~{S})-5-azanyl-4-[[[(2~{S})-2-azanyl-3-methyl-butanoyl]amino]methyl]-6-oxidanyl-6-oxidanylidene-hexyl]-tris(oxidanyl)boranuide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1H04 "Create component" 2023-12-20 PDBE A1H04 "Modify formula" 2024-07-18 PDBE A1H04 "Initial release" 2024-11-27 RCSB #