data_A1H0P # _chem_comp.id A1H0P _chem_comp.name 3-O-sulfo-alpha-D-mannopyranose _chem_comp.type "D-saccharide, alpha linking" _chem_comp.pdbx_type ATOMS _chem_comp.formula "C6 H12 O9 S" _chem_comp.mon_nstd_parent_comp_id MAN _chem_comp.pdbx_synonyms "[(2R,3R,4S,5S,6S)-2-(hydroxymethyl)-3,5,6-tris(oxidanyl)oxan-4-yl] hydrogen sulfate" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-12-16 _chem_comp.pdbx_modified_date 2024-08-23 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 260.219 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1H0P _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8R7I _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1H0P C1 C1 C 0 1 N N S N N N 56.257 27.619 39.058 1.372 1.845 0.170 C1 A1H0P 1 A1H0P C2 C2 C 0 1 N N S N N N 56.890 26.351 39.628 0.049 1.395 -0.456 C2 A1H0P 2 A1H0P C3 C3 C 0 1 N N S N N N 58.418 26.467 39.503 -0.241 -0.048 -0.034 C3 A1H0P 3 A1H0P C4 C4 C 0 1 N N R N N N 58.885 26.734 38.074 0.933 -0.938 -0.454 C4 A1H0P 4 A1H0P C5 C5 C 0 1 N N R N N N 58.015 27.810 37.407 2.222 -0.397 0.171 C5 A1H0P 5 A1H0P C6 C6 C 0 1 N N N N N N 58.251 27.897 35.894 3.408 -1.245 -0.293 C6 A1H0P 6 A1H0P O2 O1 O 0 1 N N N N N N 56.368 25.203 38.927 0.145 1.468 -1.880 O2 A1H0P 7 A1H0P O3 O2 O 0 1 N N N N N N 59.068 25.293 40.022 -1.436 -0.502 -0.672 O3 A1H0P 8 A1H0P O4 O3 O 0 1 N N N N N N 60.249 27.189 38.138 0.707 -2.274 -0.002 O4 A1H0P 9 A1H0P O5 O4 O 0 1 N N N N N N 56.601 27.619 37.666 2.416 0.958 -0.237 O5 A1H0P 10 A1H0P O6 O5 O 0 1 N N N N N N 57.881 29.199 35.381 4.594 -0.813 0.380 O6 A1H0P 11 A1H0P S S1 S 0 1 N N N N N N 59.523 25.538 41.523 -2.690 -0.343 0.177 S A1H0P 12 A1H0P O1S O6 O 0 1 N N N N N N 58.429 26.002 42.343 -3.054 1.135 0.170 O1S A1H0P 13 A1H0P O2S O7 O 0 1 N N N N N N 60.030 24.295 42.037 -3.732 -1.016 -0.515 O2S A1H0P 14 A1H0P O3S O8 O 0 1 N N N N N N 60.579 26.526 41.489 -2.313 -0.656 1.511 O3S A1H0P 15 A1H0P O1 O9 O 0 1 N Y N N N N 56.694 28.803 39.829 1.257 1.825 1.594 O1 A1H0P 16 A1H0P H1 H1 H 0 1 N N N N N N 55.166 27.524 39.157 1.605 2.857 -0.162 H1 A1H0P 17 A1H0P H2 H2 H 0 1 N N N N N N 56.633 26.281 40.695 -0.756 2.044 -0.111 H2 A1H0P 18 A1H0P H3 H3 H 0 1 N N N N N N 58.727 27.329 40.112 -0.365 -0.094 1.048 H3 A1H0P 19 A1H0P H4 H4 H 0 1 N N N N N N 58.817 25.804 37.491 1.024 -0.931 -1.540 H4 A1H0P 20 A1H0P H5 H5 H 0 1 N N N N N N 58.313 28.778 37.837 2.146 -0.442 1.258 H5 A1H0P 21 A1H0P H61 H6 H 0 1 N N N N N N 57.646 27.128 35.392 3.220 -2.293 -0.060 H61 A1H0P 22 A1H0P H62 H7 H 0 1 N N N N N N 59.316 27.719 35.686 3.539 -1.129 -1.369 H62 A1H0P 23 A1H0P HO2 H8 H 0 1 N N N N N N 56.759 24.412 39.279 0.333 2.355 -2.217 HO2 A1H0P 24 A1H0P HO4 H9 H 0 1 N N N N N N 60.786 26.523 38.551 1.412 -2.893 -0.234 HO4 A1H0P 25 A1H0P HO6 H10 H 0 1 N N N N N N 58.036 29.227 34.444 5.387 -1.308 0.134 HO6 A1H0P 26 A1H0P HO1 H11 H 0 1 N N N N N N 56.421 28.710 40.734 2.061 2.099 2.057 HO1 A1H0P 27 A1H0P H12 H12 H 0 1 N N N N N N 58.278 25.385 43.049 -3.845 1.348 0.685 H12 A1H0P 28 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1H0P O6 C6 SING N N 1 A1H0P C6 C5 SING N N 2 A1H0P C5 O5 SING N N 3 A1H0P C5 C4 SING N N 4 A1H0P O5 C1 SING N N 5 A1H0P C4 O4 SING N N 6 A1H0P C4 C3 SING N N 7 A1H0P O2 C2 SING N N 8 A1H0P C1 C2 SING N N 9 A1H0P C3 C2 SING N N 10 A1H0P C3 O3 SING N N 11 A1H0P O3 S SING N N 12 A1H0P O3S S DOUB N N 13 A1H0P S O2S DOUB N N 14 A1H0P S O1S SING N N 15 A1H0P C1 O1 SING N N 16 A1H0P C1 H1 SING N N 17 A1H0P C2 H2 SING N N 18 A1H0P C3 H3 SING N N 19 A1H0P C4 H4 SING N N 20 A1H0P C5 H5 SING N N 21 A1H0P C6 H61 SING N N 22 A1H0P C6 H62 SING N N 23 A1H0P O2 HO2 SING N N 24 A1H0P O4 HO4 SING N N 25 A1H0P O6 HO6 SING N N 26 A1H0P O1 HO1 SING N N 27 A1H0P O1S H12 SING N N 28 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1H0P InChI InChI 1.06 "InChI=1S/C6H12O9S/c7-1-2-3(8)5(15-16(11,12)13)4(9)6(10)14-2/h2-10H,1H2,(H,11,12,13)/t2-,3-,4+,5+,6+/m1/s1" A1H0P InChIKey InChI 1.06 HHRMGTRTCHNCRO-PQMKYFCFSA-N A1H0P SMILES_CANONICAL CACTVS 3.385 "OC[C@H]1O[C@H](O)[C@@H](O)[C@@H](O[S](O)(=O)=O)[C@@H]1O" A1H0P SMILES CACTVS 3.385 "OC[CH]1O[CH](O)[CH](O)[CH](O[S](O)(=O)=O)[CH]1O" A1H0P SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C([C@@H]1[C@H]([C@@H]([C@@H]([C@H](O1)O)O)OS(=O)(=O)O)O)O" A1H0P SMILES "OpenEye OEToolkits" 2.0.7 "C(C1C(C(C(C(O1)O)O)OS(=O)(=O)O)O)O" # _pdbx_chem_comp_identifier.comp_id A1H0P _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[(2~{R},3~{R},4~{S},5~{S},6~{S})-2-(hydroxymethyl)-3,5,6-tris(oxidanyl)oxan-4-yl] hydrogen sulfate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1H0P "Create component" 2023-12-16 PDBE A1H0P "Initial release" 2024-08-28 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id A1H0P _pdbx_chem_comp_synonyms.name "[(2R,3R,4S,5S,6S)-2-(hydroxymethyl)-3,5,6-tris(oxidanyl)oxan-4-yl] hydrogen sulfate" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support A1H0P "CARBOHYDRATE ISOMER" D PDB ? A1H0P "CARBOHYDRATE RING" pyranose PDB ? A1H0P "CARBOHYDRATE ANOMER" alpha PDB ? A1H0P "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # _pdbx_chem_comp_related.comp_id A1H0P _pdbx_chem_comp_related.related_comp_id MAN _pdbx_chem_comp_related.relationship_type "Carbohydrate core" _pdbx_chem_comp_related.details ? # loop_ _pdbx_chem_comp_atom_related.ordinal _pdbx_chem_comp_atom_related.comp_id _pdbx_chem_comp_atom_related.atom_id _pdbx_chem_comp_atom_related.related_comp_id _pdbx_chem_comp_atom_related.related_atom_id _pdbx_chem_comp_atom_related.related_type 1 A1H0P C1 MAN C1 "Carbohydrate core" 2 A1H0P C2 MAN C2 "Carbohydrate core" 3 A1H0P C3 MAN C3 "Carbohydrate core" 4 A1H0P C4 MAN C4 "Carbohydrate core" 5 A1H0P C5 MAN C5 "Carbohydrate core" 6 A1H0P C6 MAN C6 "Carbohydrate core" 7 A1H0P O2 MAN O2 "Carbohydrate core" 8 A1H0P O3 MAN O3 "Carbohydrate core" 9 A1H0P O4 MAN O4 "Carbohydrate core" 10 A1H0P O5 MAN O5 "Carbohydrate core" 11 A1H0P O6 MAN O6 "Carbohydrate core" 12 A1H0P O1 MAN O1 "Carbohydrate core" 13 A1H0P H1 MAN H1 "Carbohydrate core" 14 A1H0P H2 MAN H2 "Carbohydrate core" 15 A1H0P H3 MAN H3 "Carbohydrate core" 16 A1H0P H4 MAN H4 "Carbohydrate core" 17 A1H0P H5 MAN H5 "Carbohydrate core" 18 A1H0P H61 MAN H61 "Carbohydrate core" 19 A1H0P H62 MAN H62 "Carbohydrate core" 20 A1H0P HO2 MAN HO2 "Carbohydrate core" 21 A1H0P HO4 MAN HO4 "Carbohydrate core" 22 A1H0P HO6 MAN HO6 "Carbohydrate core" 23 A1H0P HO1 MAN HO1 "Carbohydrate core" #