data_A1H0Q # _chem_comp.id A1H0Q _chem_comp.name "1-[[1-[(2S,3S,4R,5S,6R)-2-(2-chloroethyloxy)-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-3-yl]-1,2,3-triazol-4-yl]methyl]guanidine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H21 Cl N6 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-12-16 _chem_comp.pdbx_modified_date 2024-10-11 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 364.785 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1H0Q _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8RCY _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1H0Q N1 N1 N 0 1 N N N N N N 3.046 11.983 4.466 6.182 -1.301 1.395 N1 A1H0Q 1 A1H0Q N3 N2 N 0 1 N N N N N N 5.017 10.857 4.859 4.562 -0.277 -0.018 N3 A1H0Q 2 A1H0Q C4 C1 C 0 1 Y N N N N N 6.610 12.047 7.904 1.407 0.636 0.634 C4 A1H0Q 3 A1H0Q C5 C2 C 0 1 N N S N N N 6.425 12.211 10.446 -0.767 1.688 -0.050 C5 A1H0Q 4 A1H0Q C6 C3 C 0 1 N N R N N N 7.534 11.325 10.966 -1.044 1.158 -1.460 C6 A1H0Q 5 A1H0Q C7 C4 C 0 1 N N S N N N 8.886 11.876 10.584 -0.567 -0.295 -1.550 C7 A1H0Q 6 A1H0Q C8 C5 C 0 1 N N R N N N 9.055 13.381 10.640 -1.269 -1.122 -0.470 C8 A1H0Q 7 A1H0Q C10 C6 C 0 1 N N S N N N 6.675 13.664 10.748 -1.461 0.784 0.972 C10 A1H0Q 8 A1H0Q C1 C7 C 0 1 N N N N N N 3.762 10.872 4.437 5.690 -1.047 0.136 C1 A1H0Q 9 A1H0Q N2 N3 N 0 1 N N N N N N 3.204 9.751 4.019 6.293 -1.537 -0.910 N2 A1H0Q 10 A1H0Q C2 C8 C 0 1 N N N N N N 5.732 11.969 5.473 3.884 0.273 1.158 C2 A1H0Q 11 A1H0Q C3 C9 C 0 1 Y N N N N N 5.638 12.026 6.961 2.685 1.073 0.719 C3 A1H0Q 12 A1H0Q N4 N4 N 0 1 Y N N N N N 5.927 12.057 9.089 0.677 1.689 0.198 N4 A1H0Q 13 A1H0Q N5 N5 N 0 1 Y N N N N N 4.613 12.078 8.898 1.469 2.691 0.038 N5 A1H0Q 14 A1H0Q N6 N6 N 0 1 Y N N N N N 4.441 12.041 7.608 2.674 2.355 0.335 N6 A1H0Q 15 A1H0Q O1 O1 O 0 1 N N N N N N 7.396 9.978 10.489 -0.342 1.953 -2.417 O1 A1H0Q 16 A1H0Q O2 O2 O 0 1 N N N N N N 9.975 11.109 11.049 -0.887 -0.824 -2.839 O2 A1H0Q 17 A1H0Q C9 C10 C 0 1 N N N N N N 10.218 13.867 9.822 -0.754 -2.562 -0.515 C9 A1H0Q 18 A1H0Q O3 O3 O 0 1 N N N N N N 10.471 15.207 10.213 -1.490 -3.361 0.414 O3 A1H0Q 19 A1H0Q O4 O4 O 0 1 N N N N N N 7.899 14.069 10.123 -0.996 -0.557 0.814 O4 A1H0Q 20 A1H0Q O5 O5 O 0 1 N N N N N N 6.707 13.914 12.125 -2.874 0.826 0.763 O5 A1H0Q 21 A1H0Q C11 C11 C 0 1 N N N N N N 6.458 15.312 12.437 -3.634 0.199 1.799 C11 A1H0Q 22 A1H0Q C12 C12 C 0 1 N N N N N N 5.134 15.455 13.063 -5.125 0.303 1.472 C12 A1H0Q 23 A1H0Q CL1 CL1 CL 0 0 N N N N N N 3.823 15.220 11.892 -5.481 -0.644 -0.020 CL1 A1H0Q 24 A1H0Q H1 H1 H 0 1 N N N N N N 3.451 12.830 4.811 5.733 -0.937 2.174 H1 A1H0Q 25 A1H0Q H2 H2 H 0 1 N N N N N N 2.100 11.976 4.143 6.976 -1.848 1.504 H2 A1H0Q 26 A1H0Q H3 H3 H 0 1 N N N N N N 5.522 10.002 4.746 4.215 -0.098 -0.906 H3 A1H0Q 27 A1H0Q H4 H4 H 0 1 N N N N N N 7.680 12.054 7.754 1.043 -0.355 0.863 H4 A1H0Q 28 A1H0Q H5 H5 H 0 1 N N N N N N 5.565 11.954 11.082 -1.154 2.703 0.039 H5 A1H0Q 29 A1H0Q H6 H6 H 0 1 N N N N N N 7.472 11.319 12.064 -2.114 1.203 -1.663 H6 A1H0Q 30 A1H0Q H7 H7 H 0 1 N N N N N N 8.906 11.689 9.500 0.511 -0.335 -1.396 H7 A1H0Q 31 A1H0Q H8 H8 H 0 1 N N N N N N 9.217 13.674 11.688 -2.345 -1.116 -0.648 H8 A1H0Q 32 A1H0Q H9 H9 H 0 1 N N N N N N 5.851 14.240 10.302 -1.233 1.132 1.979 H9 A1H0Q 33 A1H0Q H10 H10 H 0 1 N N N N N N 3.834 8.976 4.074 5.946 -1.357 -1.798 H10 A1H0Q 34 A1H0Q H11 H11 H 0 1 N N N N N N 6.794 11.886 5.200 3.560 -0.542 1.805 H11 A1H0Q 35 A1H0Q H12 H12 H 0 1 N N N N N N 5.322 12.906 5.068 4.571 0.919 1.705 H12 A1H0Q 36 A1H0Q H13 H13 H 0 1 N N N N N N 8.105 9.446 10.831 -0.472 1.673 -3.333 H13 A1H0Q 37 A1H0Q H14 H14 H 0 1 N N N N N N 9.768 10.185 10.971 -0.617 -1.744 -2.965 H14 A1H0Q 38 A1H0Q H15 H15 H 0 1 N N N N N N 9.969 13.827 8.751 -0.881 -2.963 -1.520 H15 A1H0Q 39 A1H0Q H16 H16 H 0 1 N N N N N N 11.103 13.244 10.017 0.303 -2.578 -0.249 H16 A1H0Q 40 A1H0Q H17 H17 H 0 1 N N N N N N 11.204 15.550 9.715 -1.217 -4.288 0.439 H17 A1H0Q 41 A1H0Q H18 H18 H 0 1 N N N N N N 7.231 15.675 13.131 -3.350 -0.851 1.872 H18 A1H0Q 42 A1H0Q H19 H19 H 0 1 N N N N N N 6.490 15.904 11.511 -3.434 0.697 2.747 H19 A1H0Q 43 A1H0Q H20 H20 H 0 1 N N N N N N 5.051 16.464 13.493 -5.708 -0.095 2.303 H20 A1H0Q 44 A1H0Q H21 H21 H 0 1 N N N N N N 5.036 14.706 13.863 -5.390 1.348 1.310 H21 A1H0Q 45 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1H0Q N2 C1 DOUB N N 1 A1H0Q C1 N1 SING N N 2 A1H0Q C1 N3 SING N N 3 A1H0Q N3 C2 SING N N 4 A1H0Q C2 C3 SING N N 5 A1H0Q C3 N6 SING Y N 6 A1H0Q C3 C4 DOUB Y N 7 A1H0Q N6 N5 DOUB Y N 8 A1H0Q C4 N4 SING Y N 9 A1H0Q N5 N4 SING Y N 10 A1H0Q N4 C5 SING N N 11 A1H0Q C9 O3 SING N N 12 A1H0Q C9 C8 SING N N 13 A1H0Q O4 C8 SING N N 14 A1H0Q O4 C10 SING N N 15 A1H0Q C5 C10 SING N N 16 A1H0Q C5 C6 SING N N 17 A1H0Q O1 C6 SING N N 18 A1H0Q C7 C8 SING N N 19 A1H0Q C7 C6 SING N N 20 A1H0Q C7 O2 SING N N 21 A1H0Q C10 O5 SING N N 22 A1H0Q CL1 C12 SING N N 23 A1H0Q O5 C11 SING N N 24 A1H0Q C11 C12 SING N N 25 A1H0Q N1 H1 SING N N 26 A1H0Q N1 H2 SING N N 27 A1H0Q N3 H3 SING N N 28 A1H0Q C4 H4 SING N N 29 A1H0Q C5 H5 SING N N 30 A1H0Q C6 H6 SING N N 31 A1H0Q C7 H7 SING N N 32 A1H0Q C8 H8 SING N N 33 A1H0Q C10 H9 SING N N 34 A1H0Q N2 H10 SING N N 35 A1H0Q C2 H11 SING N N 36 A1H0Q C2 H12 SING N N 37 A1H0Q O1 H13 SING N N 38 A1H0Q O2 H14 SING N N 39 A1H0Q C9 H15 SING N N 40 A1H0Q C9 H16 SING N N 41 A1H0Q O3 H17 SING N N 42 A1H0Q C11 H18 SING N N 43 A1H0Q C11 H19 SING N N 44 A1H0Q C12 H20 SING N N 45 A1H0Q C12 H21 SING N N 46 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1H0Q InChI InChI 1.06 "InChI=1S/C12H21ClN6O5/c13-1-2-23-11-8(10(22)9(21)7(5-20)24-11)19-4-6(17-18-19)3-16-12(14)15/h4,7-11,20-22H,1-3,5H2,(H4,14,15,16)/t7-,8+,9-,10-,11+/m1/s1" A1H0Q InChIKey InChI 1.06 HOLDLWPLZAVQFV-QGKZMRNZSA-N A1H0Q SMILES_CANONICAL CACTVS 3.385 "NC(=N)NCc1cn(nn1)[C@H]2[C@@H](O)[C@H](O)[C@@H](CO)O[C@@H]2OCCCl" A1H0Q SMILES CACTVS 3.385 "NC(=N)NCc1cn(nn1)[CH]2[CH](O)[CH](O)[CH](CO)O[CH]2OCCCl" A1H0Q SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "[H]/N=C(\N)/NCc1cn(nn1)[C@H]2[C@H]([C@@H]([C@H](O[C@@H]2OCCCl)CO)O)O" A1H0Q SMILES "OpenEye OEToolkits" 2.0.7 "c1c(nnn1C2C(C(C(OC2OCCCl)CO)O)O)CNC(=N)N" # _pdbx_chem_comp_identifier.comp_id A1H0Q _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "1-[[1-[(2~{S},3~{S},4~{R},5~{S},6~{R})-2-(2-chloroethyloxy)-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-3-yl]-1,2,3-triazol-4-yl]methyl]guanidine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1H0Q "Create component" 2023-12-16 PDBE A1H0Q "Initial release" 2024-10-16 RCSB #