data_A1H0V # _chem_comp.id A1H0V _chem_comp.name "1-[5,6-bis(chloranyl)-1~{H}-benzimidazol-2-yl]guanidine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C8 H7 Cl2 N5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-12-18 _chem_comp.pdbx_modified_date 2024-11-15 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 244.081 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1H0V _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8RHY _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1H0V NAG N1 N 0 1 Y N N N N N 22.732 -12.673 10.065 1.652 -0.614 -0.001 NAG A1H0V 1 A1H0V CAE C1 C 0 1 Y N N N N N 21.969 -13.710 10.451 0.282 -0.407 -0.001 CAE A1H0V 2 A1H0V CAD C2 C 0 1 Y N N N N N 21.129 -13.826 11.525 -0.817 -1.251 -0.001 CAD A1H0V 3 A1H0V CAC C3 C 0 1 Y N N N N N 20.403 -14.997 11.775 -2.092 -0.720 -0.001 CAC A1H0V 4 A1H0V CLAN CL1 CL 0 0 N N N N N N 19.253 -15.061 13.317 -3.468 -1.779 0.000 CLAN A1H0V 5 A1H0V CAB C4 C 0 1 Y N N N N N 20.583 -16.066 10.877 -2.280 0.656 -0.000 CAB A1H0V 6 A1H0V CLAO CL2 CL 0 0 N N N N N N 19.662 -17.648 11.123 -3.889 1.306 0.001 CLAO A1H0V 7 A1H0V CAA C5 C 0 1 Y N N N N N 21.449 -15.899 9.774 -1.197 1.509 -0.000 CAA A1H0V 8 A1H0V CAF C6 C 0 1 Y N N N N N 22.130 -14.738 9.570 0.098 0.986 -0.001 CAF A1H0V 9 A1H0V NAI N2 N 0 1 Y N N N N N 23.022 -14.333 8.610 1.334 1.553 -0.001 NAI A1H0V 10 A1H0V CAH C7 C 0 1 Y N N N N N 23.353 -13.047 8.917 2.247 0.615 -0.001 CAH A1H0V 11 A1H0V NAJ N3 N 0 1 N N N N N N 24.233 -12.264 8.263 3.612 0.837 -0.000 NAJ A1H0V 12 A1H0V CAK C8 C 0 1 N N N N N N 25.024 -12.659 7.242 4.484 -0.231 0.001 CAK A1H0V 13 A1H0V NAM N4 N 0 1 N N N N N N 26.027 -11.847 6.788 4.021 -1.449 0.000 NAM A1H0V 14 A1H0V NAL N5 N 0 1 N N N N N N 24.863 -13.915 6.737 5.841 -0.011 0.001 NAL A1H0V 15 A1H0V H1 H1 H 0 1 N N N N N N 22.825 -11.794 10.534 2.104 -1.472 0.002 H1 A1H0V 16 A1H0V H2 H2 H 0 1 N N N N N N 21.023 -12.990 12.200 -0.677 -2.322 -0.001 H2 A1H0V 17 A1H0V H3 H3 H 0 1 N N N N N N 21.574 -16.713 9.075 -1.350 2.578 -0.000 H3 A1H0V 18 A1H0V H5 H5 H 0 1 N N N N N N 24.307 -11.311 8.558 3.957 1.743 0.000 H5 A1H0V 19 A1H0V H6 H6 H 0 1 N N N N N N 26.578 -12.291 6.082 4.635 -2.201 0.001 H6 A1H0V 20 A1H0V H7 H7 H 0 1 N N N N N N 25.482 -14.252 6.027 6.185 0.896 0.002 H7 A1H0V 21 A1H0V H8 H8 H 0 1 N N N N N N 24.126 -14.500 7.076 6.454 -0.763 0.002 H8 A1H0V 22 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1H0V NAG CAE SING Y N 1 A1H0V NAG CAH SING Y N 2 A1H0V CAE CAD DOUB Y N 3 A1H0V CAE CAF SING Y N 4 A1H0V CAD CAC SING Y N 5 A1H0V CAC CAB DOUB Y N 6 A1H0V CAB CLAO SING N N 7 A1H0V CAB CAA SING Y N 8 A1H0V CAA CAF DOUB Y N 9 A1H0V CAF NAI SING Y N 10 A1H0V NAI CAH DOUB Y N 11 A1H0V CAH NAJ SING N N 12 A1H0V NAJ CAK SING N N 13 A1H0V CAK NAM DOUB N N 14 A1H0V CAK NAL SING N N 15 A1H0V CAC CLAN SING N N 16 A1H0V NAG H1 SING N N 17 A1H0V CAD H2 SING N N 18 A1H0V CAA H3 SING N N 19 A1H0V NAJ H5 SING N N 20 A1H0V NAM H6 SING N N 21 A1H0V NAL H7 SING N N 22 A1H0V NAL H8 SING N N 23 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1H0V InChI InChI 1.06 "InChI=1S/C8H7Cl2N5/c9-3-1-5-6(2-4(3)10)14-8(13-5)15-7(11)12/h1-2H,(H5,11,12,13,14,15)" A1H0V InChIKey InChI 1.06 XEBPUCFKEPJQFT-UHFFFAOYSA-N A1H0V SMILES_CANONICAL CACTVS 3.385 "NC(=N)Nc1[nH]c2cc(Cl)c(Cl)cc2n1" A1H0V SMILES CACTVS 3.385 "NC(=N)Nc1[nH]c2cc(Cl)c(Cl)cc2n1" A1H0V SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "[H]/N=C(/N)\Nc1[nH]c2cc(c(cc2n1)Cl)Cl" A1H0V SMILES "OpenEye OEToolkits" 2.0.7 "c1c2c(cc(c1Cl)Cl)nc([nH]2)NC(=N)N" # _pdbx_chem_comp_identifier.comp_id A1H0V _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "1-[5,6-bis(chloranyl)-1~{H}-benzimidazol-2-yl]guanidine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1H0V "Create component" 2023-12-18 PDBE A1H0V "Initial release" 2024-11-20 RCSB #