data_A1H16 # _chem_comp.id A1H16 _chem_comp.name "[6-methyl-5-oxidanylidene-4-[(4-oxidanylidene-2-sulfanylidene-1,3-thiazol-5-yl)methyl]-4~{H}-pyridin-3-yl]methyl dihydrogen phosphate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C11 H11 N2 O6 P S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-01-12 _chem_comp.pdbx_modified_date 2025-01-24 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 362.319 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1H16 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8ROS _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1H16 N1 N1 N 0 1 Y N N N N N 0.148 33.114 8.105 1.137 -3.266 0.476 N1 A1H16 1 A1H16 C4 C1 C 0 1 Y N N N N N -2.491 34.055 7.624 -0.054 -1.071 -0.657 C4 A1H16 2 A1H16 C5 C2 C 0 1 N N N N N N -3.795 34.482 7.295 -0.691 0.105 -1.264 C5 A1H16 3 A1H16 C6 C3 C 0 1 Y N N N N N -1.572 33.853 6.550 1.265 -1.015 -0.183 C6 A1H16 4 A1H16 C7 C4 C 0 1 N N N N N N -0.203 32.949 10.372 -0.832 -4.683 0.187 C7 A1H16 5 A1H16 C8 C5 C 0 1 N N N N N N -4.816 35.017 8.014 -1.845 0.594 -0.746 C8 A1H16 6 A1H16 C10 C6 C 0 1 N N N N N N -6.578 35.817 9.494 -4.007 1.246 0.557 C10 A1H16 7 A1H16 O6 O1 O 0 1 N N N N N N -6.095 35.589 6.132 -2.420 2.272 -2.303 O6 A1H16 8 A1H16 C11 C7 C 0 1 N N N N N N -5.951 35.510 7.406 -2.690 1.673 -1.279 C11 A1H16 9 A1H16 N2 N2 N 0 1 N N N N N N -6.887 35.985 8.208 -3.767 1.943 -0.560 N2 A1H16 10 A1H16 S2 S1 S 0 1 N N N N N N -7.636 36.308 10.726 -5.339 1.443 1.615 S2 A1H16 11 A1H16 S1 S2 S 0 1 N N N N N N -5.085 35.084 9.792 -2.688 0.075 0.727 S1 A1H16 12 A1H16 C3 C8 C 0 1 Y N N N N N -2.039 33.737 8.935 -0.749 -2.289 -0.534 C3 A1H16 13 A1H16 O5 O2 O 0 1 N N N N N N -2.774 33.877 9.914 -2.028 -2.403 -0.975 O5 A1H16 14 A1H16 C2 C9 C 0 1 Y N N N N N -0.730 33.303 9.109 -0.104 -3.371 0.046 C2 A1H16 15 A1H16 C1 C10 C 0 1 Y N N N N N -0.259 33.420 6.759 1.823 -2.143 0.379 C1 A1H16 16 A1H16 C9 C11 C 0 1 N N N N N N -2.005 34.069 5.120 2.061 0.261 -0.288 C9 A1H16 17 A1H16 O1 O3 O 0 1 N N N N N N -2.398 35.357 4.727 3.364 0.056 0.262 O1 A1H16 18 A1H16 P1 P1 P 0 1 N N N N N N -1.438 36.547 4.321 4.485 1.211 0.316 P1 A1H16 19 A1H16 O3 O4 O 0 1 N N N N N N -0.821 37.074 5.610 4.911 1.616 -1.182 O3 A1H16 20 A1H16 O4 O5 O 0 1 N N N N N N -0.445 36.019 3.318 3.937 2.397 1.011 O4 A1H16 21 A1H16 O2 O6 O 0 1 N N N N N N -2.428 37.585 3.832 5.775 0.669 1.113 O2 A1H16 22 A1H16 H2 H2 H 0 1 N N N N N N -4.032 34.357 6.249 -0.241 0.580 -2.123 H2 A1H16 23 A1H16 H4 H4 H 0 1 N N N N N N 0.830 32.590 10.251 -1.352 -4.709 1.145 H4 A1H16 24 A1H16 H5 H5 H 0 1 N N N N N N -0.210 33.829 11.032 -1.556 -4.786 -0.622 H5 A1H16 25 A1H16 H6 H6 H 0 1 N N N N N N -0.818 32.153 10.816 -0.116 -5.503 0.140 H6 A1H16 26 A1H16 H7 H7 H 0 1 N N N N N N -7.729 36.420 7.888 -4.379 2.641 -0.841 H7 A1H16 27 A1H16 H8 H8 H 0 1 N N N N N N 0.430 33.318 5.934 2.838 -2.107 0.746 H8 A1H16 28 A1H16 H9 H9 H 0 1 N N N N N N -2.857 33.399 4.934 2.150 0.549 -1.335 H9 A1H16 29 A1H16 H10 H10 H 0 1 N N N N N N -1.161 33.777 4.478 1.554 1.052 0.265 H10 A1H16 30 A1H16 H11 H11 H 0 1 N N N N N N 0.124 36.981 5.571 5.279 0.885 -1.698 H11 A1H16 31 A1H16 H12 H12 H 0 1 N N N N N N -2.272 37.764 2.912 6.492 1.314 1.185 H12 A1H16 32 A1H16 H1 H1 H 0 1 N N N N N N -2.308 33.618 10.700 -2.103 -2.721 -1.885 H1 A1H16 33 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1H16 O4 P1 DOUB N N 1 A1H16 O2 P1 SING N N 2 A1H16 P1 O1 SING N N 3 A1H16 P1 O3 SING N N 4 A1H16 O1 C9 SING N N 5 A1H16 C9 C6 SING N N 6 A1H16 O6 C11 DOUB N N 7 A1H16 C6 C1 DOUB Y N 8 A1H16 C6 C4 SING Y N 9 A1H16 C1 N1 SING Y N 10 A1H16 C5 C4 SING N N 11 A1H16 C5 C8 DOUB N Z 12 A1H16 C11 C8 SING N N 13 A1H16 C11 N2 SING N N 14 A1H16 C4 C3 DOUB Y N 15 A1H16 C8 S1 SING N N 16 A1H16 N1 C2 DOUB Y N 17 A1H16 N2 C10 SING N N 18 A1H16 C3 C2 SING Y N 19 A1H16 C3 O5 SING N N 20 A1H16 C2 C7 SING N N 21 A1H16 C10 S1 SING N N 22 A1H16 C10 S2 DOUB N N 23 A1H16 C5 H2 SING N N 24 A1H16 C7 H4 SING N N 25 A1H16 C7 H5 SING N N 26 A1H16 C7 H6 SING N N 27 A1H16 N2 H7 SING N N 28 A1H16 C1 H8 SING N N 29 A1H16 C9 H9 SING N N 30 A1H16 C9 H10 SING N N 31 A1H16 O3 H11 SING N N 32 A1H16 O2 H12 SING N N 33 A1H16 O5 H1 SING N N 34 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1H16 InChI InChI 1.06 "InChI=1S/C11H11N2O6PS2/c1-5-9(14)7(2-8-10(15)13-11(21)22-8)6(3-12-5)4-19-20(16,17)18/h2-3,14H,4H2,1H3,(H,13,15,21)(H2,16,17,18)/b8-2-" A1H16 InChIKey InChI 1.06 WJDPAGLWZIPYMX-WAPJZHGLSA-N A1H16 SMILES_CANONICAL CACTVS 3.385 "Cc1ncc(CO[P](O)(O)=O)c(\C=C\2SC(=S)NC\2=O)c1O" A1H16 SMILES CACTVS 3.385 "Cc1ncc(CO[P](O)(O)=O)c(C=C2SC(=S)NC2=O)c1O" A1H16 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c(c(c(cn1)COP(=O)(O)O)/C=C\2/C(=O)NC(=S)S2)O" A1H16 SMILES "OpenEye OEToolkits" 2.0.7 "Cc1c(c(c(cn1)COP(=O)(O)O)C=C2C(=O)NC(=S)S2)O" # _pdbx_chem_comp_identifier.comp_id A1H16 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[6-methyl-5-oxidanyl-4-[(~{Z})-(4-oxidanylidene-2-sulfanylidene-1,3-thiazolidin-5-ylidene)methyl]pyridin-3-yl]methyl dihydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1H16 "Create component" 2024-01-12 PDBE A1H16 "Modify formula" 2024-01-23 PDBE A1H16 "Initial release" 2025-01-29 RCSB #