data_A1H1F # _chem_comp.id A1H1F _chem_comp.name 6-deoxy-6-sulfo-beta-D-galacto-heptopyranose _chem_comp.type "D-saccharide, beta linking" _chem_comp.pdbx_type ATOMS _chem_comp.formula "C6 H12 O8 S" _chem_comp.mon_nstd_parent_comp_id GAL _chem_comp.pdbx_synonyms "6-deoxy-6-sulfo-beta-D-galacto-heptose; 6-deoxy-6-sulfo-D-galacto-heptose; 6-deoxy-6-sulfo-galacto-heptose; 6-DEOXY-6-SULFO-D-GALACTO-HEPTOPYRANOSE; [(2S,3R,4S,5R,6R)-3,4,5,6-tetrakis(oxidanyl)oxan-2-yl]methanesulfonic acid" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-12-21 _chem_comp.pdbx_modified_date 2024-12-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 244.220 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1H1F _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8RH5 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1H1F C1 C1 C 0 1 N N R N N N 173.961 212.890 221.733 1.395 1.385 -0.152 C1 A1H1F 1 A1H1F O5 O1 O 0 1 N N N N N N 173.130 213.900 222.398 0.209 0.753 0.333 O5 A1H1F 2 A1H1F C5 C2 C 0 1 N N S N N N 174.003 214.546 223.325 -0.098 -0.485 -0.312 C5 A1H1F 3 A1H1F C6 C3 C 0 1 N N N N N N 173.222 215.498 224.222 -1.396 -1.053 0.266 C6 A1H1F 4 A1H1F C4 C4 C 0 1 N N R N N N 175.118 215.263 222.559 1.043 -1.478 -0.077 C4 A1H1F 5 A1H1F O4 O2 O 0 1 N N N N N N 174.547 216.350 221.829 1.167 -1.741 1.322 O4 A1H1F 6 A1H1F C3 C5 C 0 1 N N S N N N 175.853 214.331 221.591 2.349 -0.877 -0.604 C3 A1H1F 7 A1H1F O3 O3 O 0 1 N N N N N N 176.727 215.126 220.787 3.432 -1.767 -0.324 O3 A1H1F 8 A1H1F C2 C6 C 0 1 N N R N N N 174.880 213.564 220.721 2.596 0.467 0.089 C2 A1H1F 9 A1H1F O2 O4 O 0 1 N N N N N N 175.577 212.525 220.033 3.775 1.071 -0.447 O2 A1H1F 10 A1H1F S6 S1 S 0 1 N N N N N N 173.831 215.482 225.770 -2.774 0.055 -0.140 S6 A1H1F 11 A1H1F O1S6 O5 O 0 0 N N N N N N 172.993 216.350 226.626 -3.993 -0.612 0.482 O1S6 A1H1F 12 A1H1F O2S6 O6 O 0 0 N N N N N N 175.221 215.994 225.779 -2.650 1.284 0.563 O2S6 A1H1F 13 A1H1F O3S6 O7 O 0 0 N N N N N N 173.806 214.105 226.319 -3.037 0.033 -1.536 O3S6 A1H1F 14 A1H1F O1 O8 O 0 1 N Y N N N N 173.700 211.625 221.068 1.593 2.620 0.538 O1 A1H1F 15 A1H1F H1 H1 H 0 1 N N N N N N 174.666 212.603 222.527 1.293 1.577 -1.220 H1 A1H1F 16 A1H1F H5 H2 H 0 1 N N N N N N 174.472 213.786 223.967 -0.220 -0.317 -1.382 H5 A1H1F 17 A1H1F H61 H3 H 0 1 N N N N N N 173.295 216.518 223.816 -1.584 -2.038 -0.161 H61 A1H1F 18 A1H1F H62 H4 H 0 1 N N N N N N 172.167 215.187 224.246 -1.305 -1.138 1.349 H62 A1H1F 19 A1H1F H4 H5 H 0 1 N N N N N N 175.846 215.648 223.288 0.831 -2.408 -0.604 H4 A1H1F 20 A1H1F HO4 H6 H 0 1 N Y N N N N 174.091 216.929 222.428 1.872 -2.363 1.545 HO4 A1H1F 21 A1H1F H3 H7 H 0 1 N N N N N N 176.441 213.611 222.180 2.272 -0.723 -1.680 H3 A1H1F 22 A1H1F HO3 H8 H 0 1 N Y N N N N 177.330 215.600 221.348 4.292 -1.448 -0.631 HO3 A1H1F 23 A1H1F H2 H9 H 0 1 N N N N N N 174.322 214.231 220.047 2.723 0.307 1.160 H2 A1H1F 24 A1H1F HO2 H10 H 0 1 N Y N N N N 174.968 212.043 219.486 3.992 1.927 -0.053 HO2 A1H1F 25 A1H1F HO1 H11 H 0 1 N Y N N N N 173.124 211.096 221.607 0.869 3.252 0.430 HO1 A1H1F 26 A1H1F H1S6 H12 H 0 0 N N N N N N 172.625 215.836 227.335 -4.819 -0.127 0.345 H1S6 A1H1F 27 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1H1F O2 C2 SING N N 1 A1H1F C2 C3 SING N N 2 A1H1F C2 C1 SING N N 3 A1H1F O3 C3 SING N N 4 A1H1F C3 C4 SING N N 5 A1H1F C1 O5 SING N N 6 A1H1F O4 C4 SING N N 7 A1H1F O5 C5 SING N N 8 A1H1F C4 C5 SING N N 9 A1H1F C5 C6 SING N N 10 A1H1F C6 S6 SING N N 11 A1H1F S6 O2S6 DOUB N N 12 A1H1F S6 O3S6 DOUB N N 13 A1H1F S6 O1S6 SING N N 14 A1H1F C1 O1 SING N N 15 A1H1F C1 H1 SING N N 16 A1H1F C5 H5 SING N N 17 A1H1F C6 H61 SING N N 18 A1H1F C6 H62 SING N N 19 A1H1F C4 H4 SING N N 20 A1H1F O4 HO4 SING N N 21 A1H1F C3 H3 SING N N 22 A1H1F O3 HO3 SING N N 23 A1H1F C2 H2 SING N N 24 A1H1F O2 HO2 SING N N 25 A1H1F O1 HO1 SING N N 26 A1H1F O1S6 H1S6 SING N N 27 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1H1F InChI InChI 1.06 "InChI=1S/C6H12O8S/c7-3-2(1-15(11,12)13)14-6(10)5(9)4(3)8/h2-10H,1H2,(H,11,12,13)/t2-,3+,4+,5-,6-/m1/s1" A1H1F InChIKey InChI 1.06 QFBWOLBPVQLZEH-FPRJBGLDSA-N A1H1F SMILES_CANONICAL CACTVS 3.385 "O[C@@H]1O[C@H](C[S](O)(=O)=O)[C@H](O)[C@H](O)[C@H]1O" A1H1F SMILES CACTVS 3.385 "O[CH]1O[CH](C[S](O)(=O)=O)[CH](O)[CH](O)[CH]1O" A1H1F SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C([C@@H]1[C@@H]([C@@H]([C@H]([C@@H](O1)O)O)O)O)S(=O)(=O)O" A1H1F SMILES "OpenEye OEToolkits" 2.0.7 "C(C1C(C(C(C(O1)O)O)O)O)S(=O)(=O)O" # _pdbx_chem_comp_identifier.comp_id A1H1F _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[(2~{S},3~{R},4~{S},5~{R},6~{R})-3,4,5,6-tetrakis(oxidanyl)oxan-2-yl]methanesulfonic acid" # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support A1H1F "CARBOHYDRATE ISOMER" D PDB ? A1H1F "CARBOHYDRATE RING" pyranose PDB ? A1H1F "CARBOHYDRATE ANOMER" beta PDB ? A1H1F "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 A1H1F 6-deoxy-6-sulfo-beta-D-galacto-heptose PDB ? 2 A1H1F 6-deoxy-6-sulfo-D-galacto-heptose PDB ? 3 A1H1F 6-deoxy-6-sulfo-galacto-heptose PDB ? 4 A1H1F 6-DEOXY-6-SULFO-D-GALACTO-HEPTOPYRANOSE PDB ? 5 A1H1F "[(2S,3R,4S,5R,6R)-3,4,5,6-tetrakis(oxidanyl)oxan-2-yl]methanesulfonic acid" PDB ? # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1H1F "Create component" 2023-12-22 PDBE A1H1F "Initial release" 2025-01-01 RCSB #