data_A1H1V # _chem_comp.id A1H1V _chem_comp.name "3-O-sulfo-alpha-L-idopyranuronic acid" _chem_comp.type "L-saccharide, alpha linking" _chem_comp.pdbx_type ATOMS _chem_comp.formula "C6 H10 O10 S" _chem_comp.mon_nstd_parent_comp_id IDR _chem_comp.pdbx_synonyms "O3-SULFO-GLUCURONIC ACID; 3-O-sulfo-alpha-L-iduronic acid; 3-O-sulfo-L-iduronic acid; 3-O-sulfo-iduronic acid" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-01-09 _chem_comp.pdbx_modified_date 2024-07-12 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 274.203 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1H1V _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8RLS _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1H1V C4 C1 C 0 1 N N R N N N 218.687 214.332 207.265 0.968 0.510 -0.863 C4 A1H1V 1 A1H1V C5 C2 C 0 1 N N R N N N 219.336 213.340 206.309 1.731 0.361 0.456 C5 A1H1V 2 A1H1V C6 C3 C 0 1 N N N N N N 220.682 212.850 206.785 3.114 0.940 0.304 C6 A1H1V 3 A1H1V C1 C4 C 0 1 N N R N N N 218.348 214.397 204.385 0.567 -1.666 0.989 C7 A1H1V 4 A1H1V C2 C5 C 0 1 N N R N N N 217.520 215.327 205.266 -0.245 -1.599 -0.310 C20 A1H1V 5 A1H1V C3 C6 C 0 1 N N S N N N 217.348 214.793 206.691 -0.415 -0.133 -0.720 C21 A1H1V 6 A1H1V O2 O1 O 0 1 N N N N N N 218.124 216.616 205.307 0.446 -2.306 -1.342 O20 A1H1V 7 A1H1V O3 O2 O 0 1 N N N N N N 216.435 213.674 206.653 -1.163 0.559 0.282 O21 A1H1V 8 A1H1V O22 O3 O 0 1 N N N N N N 216.906 212.446 208.760 -3.245 -0.734 0.276 O22 A1H1V 9 A1H1V O23 O4 O 0 1 N N N N N N 214.883 212.007 207.481 -3.204 1.520 0.966 O23 A1H1V 10 A1H1V O24 O5 O 0 1 N N N N N N 215.099 214.056 208.738 -2.783 0.853 -1.406 O24 A1H1V 11 A1H1V O4 O6 O 0 1 N N N N N N 219.532 215.481 207.403 1.691 -0.142 -1.909 O4 A1H1V 12 A1H1V O6A O7 O 0 1 N N N N N N 221.142 211.949 205.977 4.082 0.221 0.381 O5 A1H1V 13 A1H1V O6B O8 O 0 1 N N N N N N 221.550 213.939 207.048 3.271 2.255 0.083 O6 A1H1V 14 A1H1V O5 O9 O 0 1 N N N N N N 219.545 213.996 205.049 1.828 -1.023 0.795 O7 A1H1V 15 A1H1V S1 S1 S 0 1 N N N N N N 215.851 212.967 207.934 -2.656 0.641 -0.006 S1 A1H1V 16 A1H1V H4 H1 H 0 1 N N N N N N 218.521 213.849 208.239 0.855 1.567 -1.102 H1 A1H1V 17 A1H1V H2 H2 H 0 1 N N N N N N 218.665 212.478 206.180 1.199 0.893 1.245 H2 A1H1V 18 A1H1V H1 H3 H 0 1 N N N N N N 218.632 214.974 203.493 0.729 -2.709 1.263 H3 A1H1V 19 A1H1V H6 H5 H 0 1 N N N N N N 216.519 215.412 204.817 -1.224 -2.052 -0.151 H5 A1H1V 20 A1H1V H3 H6 H 0 1 N N N N N N 216.941 215.593 207.327 -0.942 -0.080 -1.673 H6 A1H1V 21 A1H1V HO2 H7 H 0 1 N Y N N N N 217.605 217.192 205.857 0.594 -3.241 -1.147 H7 A1H1V 22 A1H1V HO4 H8 H 0 1 N Y N N N N 219.129 216.101 207.999 2.579 0.214 -2.054 H8 A1H1V 23 A1H1V HO6B H10 H 0 1 N N N N N N 222.361 213.822 206.567 4.177 2.580 -0.008 H10 A1H1V 24 A1H1V O1 O10 O 0 1 N Y N N N N 217.553 213.325 203.981 -0.150 -1.005 2.033 O1 A1H1V 25 A1H1V H5 H4 H 0 1 N N N N N N 216.897 212.887 209.601 -4.198 -0.792 0.123 H4 A1H1V 26 A1H1V HO1 H9 H 0 1 N N N N N N 216.774 213.653 203.547 0.306 -1.007 2.886 H9 A1H1V 27 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1H1V C1 O5 SING N N 1 A1H1V C1 C2 SING N N 2 A1H1V O5 C5 SING N N 3 A1H1V C2 O2 SING N N 4 A1H1V C2 C3 SING N N 5 A1H1V O6A C6 DOUB N N 6 A1H1V C5 C6 SING N N 7 A1H1V C5 C4 SING N N 8 A1H1V O3 C3 SING N N 9 A1H1V O3 S1 SING N N 10 A1H1V C3 C4 SING N N 11 A1H1V C6 O6B SING N N 12 A1H1V C4 O4 SING N N 13 A1H1V O23 S1 DOUB N N 14 A1H1V S1 O24 DOUB N N 15 A1H1V S1 O22 SING N N 16 A1H1V C4 H4 SING N N 17 A1H1V C5 H2 SING N N 18 A1H1V C1 H1 SING N N 19 A1H1V C2 H6 SING N N 20 A1H1V C3 H3 SING N N 21 A1H1V O2 HO2 SING N N 22 A1H1V O4 HO4 SING N N 23 A1H1V O6B HO6B SING N N 24 A1H1V C1 O1 SING N N 25 A1H1V O22 H5 SING N N 26 A1H1V O1 HO1 SING N N 27 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1H1V InChI InChI 1.06 "InChI=1S/C6H10O10S/c7-1-3(16-17(12,13)14)2(8)6(11)15-4(1)5(9)10/h1-4,6-8,11H,(H,9,10)(H,12,13,14)/t1-,2+,3-,4+,6+/m0/s1" A1H1V InChIKey InChI 1.06 DUBHWJMYQMPMAY-ZGFJKJOTSA-N A1H1V SMILES_CANONICAL CACTVS 3.385 "O[C@@H]1O[C@H]([C@@H](O)[C@H](O[S](O)(=O)=O)[C@H]1O)C(O)=O" A1H1V SMILES CACTVS 3.385 "O[CH]1O[CH]([CH](O)[CH](O[S](O)(=O)=O)[CH]1O)C(O)=O" A1H1V SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "[C@@H]1([C@@H]([C@H]([C@@H](O[C@H]1C(=O)O)O)O)OS(=O)(=O)O)O" A1H1V SMILES "OpenEye OEToolkits" 2.0.7 "C1(C(C(C(OC1C(=O)O)O)O)OS(=O)(=O)O)O" # _pdbx_chem_comp_identifier.comp_id A1H1V _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{R},3~{R},4~{S},5~{R},6~{R})-3,5,6-tris(oxidanyl)-4-sulfooxy-oxane-2-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1H1V "Create component" 2024-01-09 PDBE A1H1V "Initial release" 2024-07-17 RCSB # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 A1H1V "O3-SULFO-GLUCURONIC ACID" PDB ? 2 A1H1V "3-O-sulfo-alpha-L-iduronic acid" PDB ? 3 A1H1V "3-O-sulfo-L-iduronic acid" PDB ? 4 A1H1V "3-O-sulfo-iduronic acid" PDB ? # _pdbx_chem_comp_related.comp_id A1H1V _pdbx_chem_comp_related.related_comp_id IDR _pdbx_chem_comp_related.relationship_type "Carbohydrate core" _pdbx_chem_comp_related.details ? # loop_ _pdbx_chem_comp_atom_related.ordinal _pdbx_chem_comp_atom_related.comp_id _pdbx_chem_comp_atom_related.atom_id _pdbx_chem_comp_atom_related.related_comp_id _pdbx_chem_comp_atom_related.related_atom_id _pdbx_chem_comp_atom_related.related_type 1 A1H1V C4 IDR C4 "Carbohydrate core" 2 A1H1V C5 IDR C5 "Carbohydrate core" 3 A1H1V C6 IDR C6 "Carbohydrate core" 4 A1H1V C1 IDR C1 "Carbohydrate core" 5 A1H1V C2 IDR C2 "Carbohydrate core" 6 A1H1V C3 IDR C3 "Carbohydrate core" 7 A1H1V O2 IDR O2 "Carbohydrate core" 8 A1H1V O3 IDR O3 "Carbohydrate core" 9 A1H1V O4 IDR O4 "Carbohydrate core" 10 A1H1V O6A IDR O6A "Carbohydrate core" 11 A1H1V O6B IDR O6B "Carbohydrate core" 12 A1H1V O5 IDR O5 "Carbohydrate core" 13 A1H1V H4 IDR H4 "Carbohydrate core" 14 A1H1V H2 IDR H5 "Carbohydrate core" 15 A1H1V H1 IDR H1 "Carbohydrate core" 16 A1H1V H6 IDR H2 "Carbohydrate core" 17 A1H1V H3 IDR H3 "Carbohydrate core" 18 A1H1V HO2 IDR HO2 "Carbohydrate core" 19 A1H1V HO4 IDR HO4 "Carbohydrate core" 20 A1H1V HO6B IDR HO6B "Carbohydrate core" 21 A1H1V O1 IDR O1 "Carbohydrate core" 22 A1H1V HO1 IDR HO1 "Carbohydrate core" # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support A1H1V "CARBOHYDRATE ISOMER" L PDB ? A1H1V "CARBOHYDRATE RING" pyranose PDB ? A1H1V "CARBOHYDRATE ANOMER" alpha PDB ? A1H1V "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? #