data_A1H1X # _chem_comp.id A1H1X _chem_comp.name "(2~{R},3~{R},4~{S},5~{R},6~{R})-~{N}-[3,5-bis(chloranyl)phenyl]-6-(hydroxymethyl)-3-methoxy-5-oxidanyl-~{N}-[(1~{S},2~{S})-2-oxidanylcyclobutyl]-4-[4-[3,4,5-tris(fluoranyl)phenyl]-1,2,3-triazol-1-yl]oxane-2-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H25 Cl2 F3 N4 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-01-09 _chem_comp.pdbx_modified_date 2025-01-24 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 617.401 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1H1X _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8RMV _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1H1X N1 N1 N 0 1 N N N N N N -20.908 10.830 -2.314 -3.388 0.319 0.135 N1 A1H1X 1 A1H1X N3 N2 N 0 1 Y N N N N N -13.312 8.131 -2.653 3.362 0.295 2.339 N3 A1H1X 2 A1H1X C4 C1 C 0 1 Y N N N N N -13.296 8.532 -1.358 3.839 0.219 1.083 C4 A1H1X 3 A1H1X C5 C2 C 0 1 Y N N N N N -12.044 8.777 -0.620 5.093 -0.445 0.644 C5 A1H1X 4 A1H1X C6 C3 C 0 1 N N N N N N -19.684 10.631 -1.738 -2.586 0.963 -0.735 C6 A1H1X 5 A1H1X C7 C4 C 0 1 Y N N N N N -9.687 9.147 -0.551 6.622 -1.052 -1.106 C7 A1H1X 6 A1H1X C8 C5 C 0 1 Y N N N N N -10.828 8.941 -1.289 5.455 -0.433 -0.701 C8 A1H1X 7 A1H1X C10 C6 C 0 1 Y N N N N N -9.715 9.187 0.815 7.433 -1.684 -0.175 C10 A1H1X 8 A1H1X C15 C7 C 0 1 N N N N N N -21.966 13.103 -2.884 -2.723 1.907 1.966 C15 A1H1X 9 A1H1X C20 C8 C 0 1 Y N N N N N -22.867 7.903 -3.412 -3.788 -2.930 -1.543 C20 A1H1X 10 A1H1X C21 C9 C 0 1 Y N N N N N -22.817 8.023 -4.779 -4.713 -3.541 -0.714 C21 A1H1X 11 A1H1X C22 C10 C 0 1 Y N N N N N -22.123 9.083 -5.303 -5.201 -2.871 0.394 C22 A1H1X 12 A1H1X C1 C11 C 0 1 N N N N N N -16.235 11.520 -2.545 -0.956 -1.088 0.998 C1 A1H1X 13 A1H1X OP3 O1 O 0 1 N N N N N N -16.970 10.383 -2.962 -0.712 0.273 1.359 OP3 A1H1X 14 A1H1X C2 C12 C 0 1 N N R N N N -17.431 9.515 -1.918 -0.319 1.104 0.264 C2 A1H1X 15 A1H1X C3 C13 C 0 1 N N S N N N -16.785 8.162 -2.118 0.777 2.070 0.722 C3 A1H1X 16 A1H1X N2 N3 N 0 1 Y N N N N N -15.336 8.249 -1.982 1.964 1.311 1.123 N2 A1H1X 17 A1H1X NAA N4 N 0 1 Y N N N N N -14.553 7.964 -3.033 2.254 0.947 2.322 NAA A1H1X 18 A1H1X F1 F1 F 0 1 N N N N N N -8.496 9.313 -1.170 6.971 -1.046 -2.411 F1 A1H1X 19 A1H1X CAA C14 C 0 1 Y N N N N N -12.074 8.810 0.773 5.912 -1.076 1.577 CAA A1H1X 20 A1H1X C9 C15 C 0 1 Y N N N N N -10.903 9.016 1.458 7.078 -1.693 1.165 C9 A1H1X 21 A1H1X F2 F2 F 0 1 N N N N N N -10.912 9.071 2.797 7.870 -2.311 2.069 F2 A1H1X 22 A1H1X F3 F3 F 0 1 N N N N N N -8.584 9.394 1.500 8.573 -2.289 -0.575 F3 A1H1X 23 A1H1X C11 C16 C 0 1 Y N N N N N -14.593 8.605 -0.929 2.939 0.874 0.294 C11 A1H1X 24 A1H1X C12 C17 C 0 1 N N R N N N -18.943 9.347 -2.045 -1.526 1.907 -0.227 C12 A1H1X 25 A1H1X C14 C18 C 0 1 N N S N N N -21.705 11.982 -1.859 -3.797 0.976 1.379 C14 A1H1X 26 A1H1X C16 C19 C 0 1 N N N N N N -23.379 13.215 -2.324 -3.338 3.027 1.109 C16 A1H1X 27 A1H1X "C5'" C20 C 0 1 N N S N N N -23.220 11.800 -1.786 -4.654 2.234 1.157 "C5'" A1H1X 28 A1H1X "O5'" O2 O 0 1 N N N N N N -23.827 11.575 -0.543 -5.482 2.566 2.274 "O5'" A1H1X 29 A1H1X C18 C21 C 0 1 Y N N N N N -21.522 9.853 -3.146 -3.834 -0.976 -0.151 C18 A1H1X 30 A1H1X C19 C22 C 0 1 Y N N N N N -22.242 8.807 -2.578 -3.345 -1.650 -1.262 C19 A1H1X 31 A1H1X CL1 CL1 CL 0 0 N N N N N N -23.745 6.573 -2.737 -3.178 -3.773 -2.932 CL1 A1H1X 32 A1H1X CL2 CL2 CL 0 0 N N N N N N -22.053 9.255 -7.033 -6.361 -3.641 1.431 CL2 A1H1X 33 A1H1X C23 C23 C 0 1 Y N N N N N -21.483 10.010 -4.520 -4.766 -1.589 0.676 C23 A1H1X 34 A1H1X O6 O3 O 0 1 N N N N N N -19.197 11.439 -0.953 -2.716 0.783 -1.927 O6 A1H1X 35 A1H1X "O2'" O4 O 0 1 N N N N N N -19.444 8.366 -1.128 -1.119 2.779 -1.283 "O2'" A1H1X 36 A1H1X "C2'" C24 C 0 1 N N R N N N -18.880 7.064 -1.343 -0.130 3.737 -0.900 "C2'" A1H1X 37 A1H1X "C3'" C25 C 0 1 N N N N N N -19.524 6.101 -0.354 0.206 4.629 -2.097 "C3'" A1H1X 38 A1H1X "O3'" O5 O 0 1 N N N N N N -20.907 5.942 -0.623 -0.944 5.398 -2.456 "O3'" A1H1X 39 A1H1X "C1'" C26 C 0 1 N N R N N N -17.377 7.139 -1.151 1.134 3.006 -0.437 "C1'" A1H1X 40 A1H1X "O4'" O6 O 0 1 N N N N N N -17.093 7.523 0.195 1.668 2.242 -1.520 "O4'" A1H1X 41 A1H1X H6 H1 H 0 1 N N N N N N -10.786 8.906 -2.368 4.824 0.059 -1.426 H6 A1H1X 42 A1H1X H11 H2 H 0 1 N N N N N N -21.915 12.782 -3.935 -2.827 2.072 3.039 H11 A1H1X 43 A1H1X H12 H3 H 0 1 N N N N N N -21.347 14.002 -2.745 -1.707 1.641 1.674 H12 A1H1X 44 A1H1X H18 H4 H 0 1 N N N N N N -23.308 7.306 -5.420 -5.053 -4.542 -0.933 H18 A1H1X 45 A1H1X H2 H5 H 0 1 N N N N N N -15.936 12.107 -3.426 -0.024 -1.549 0.672 H2 A1H1X 46 A1H1X H3 H6 H 0 1 N N N N N N -16.861 12.140 -1.887 -1.347 -1.628 1.860 H3 A1H1X 47 A1H1X H1 H7 H 0 1 N N N N N N -15.337 11.196 -1.998 -1.683 -1.124 0.187 H1 A1H1X 48 A1H1X H4 H8 H 0 1 N N N N N N -17.178 9.914 -0.924 0.059 0.482 -0.547 H4 A1H1X 49 A1H1X H5 H9 H 0 1 N N N N N N -17.019 7.827 -3.139 0.416 2.656 1.568 H5 A1H1X 50 A1H1X H7 H10 H 0 1 N N N N N N -13.004 8.676 1.305 5.636 -1.083 2.622 H7 A1H1X 51 A1H1X H8 H11 H 0 1 N N N N N N -14.943 8.890 0.052 2.995 1.015 -0.775 H8 A1H1X 52 A1H1X H9 H12 H 0 1 N N N N N N -19.175 9.045 -3.077 -1.930 2.497 0.596 H9 A1H1X 53 A1H1X H10 H13 H 0 1 N N N N N N -21.315 12.399 -0.919 -4.218 0.282 2.106 H10 A1H1X 54 A1H1X H13 H14 H 0 1 N N N N N N -23.504 13.987 -1.550 -3.388 3.989 1.619 H13 A1H1X 55 A1H1X H14 H15 H 0 1 N N N N N N -24.165 13.329 -3.085 -2.907 3.098 0.110 H14 A1H1X 56 A1H1X H15 H16 H 0 1 N N N N N N -23.548 11.070 -2.541 -5.197 2.231 0.212 H15 A1H1X 57 A1H1X H16 H17 H 0 1 N N N N N N -23.683 10.674 -0.278 -6.023 3.356 2.140 H16 A1H1X 58 A1H1X H17 H18 H 0 1 N N N N N N -22.310 8.705 -1.505 -2.620 -1.176 -1.907 H17 A1H1X 59 A1H1X H19 H19 H 0 1 N N N N N N -20.961 10.843 -4.966 -5.148 -1.067 1.541 H19 A1H1X 60 A1H1X H20 H20 H 0 1 N N N N N N -19.094 6.722 -2.366 -0.515 4.351 -0.086 H20 A1H1X 61 A1H1X H21 H21 H 0 1 N N N N N N -19.028 5.122 -0.431 1.023 5.300 -1.832 H21 A1H1X 62 A1H1X H22 H22 H 0 1 N N N N N N -19.399 6.496 0.665 0.506 4.007 -2.941 H22 A1H1X 63 A1H1X H23 H23 H 0 1 N N N N N N -21.285 5.338 0.006 -0.803 5.988 -3.210 H23 A1H1X 64 A1H1X H24 H24 H 0 1 N N N N N N -16.939 6.153 -1.365 1.874 3.733 -0.103 H24 A1H1X 65 A1H1X H25 H25 H 0 1 N N N N N N -17.463 6.884 0.792 1.917 2.772 -2.290 H25 A1H1X 66 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1H1X CL2 C22 SING N N 1 A1H1X C22 C21 DOUB Y N 2 A1H1X C22 C23 SING Y N 3 A1H1X C21 C20 SING Y N 4 A1H1X C23 C18 DOUB Y N 5 A1H1X C20 CL1 SING N N 6 A1H1X C20 C19 DOUB Y N 7 A1H1X C18 C19 SING Y N 8 A1H1X C18 N1 SING N N 9 A1H1X NAA N3 DOUB Y N 10 A1H1X NAA N2 SING Y N 11 A1H1X OP3 C1 SING N N 12 A1H1X OP3 C2 SING N N 13 A1H1X C15 C16 SING N N 14 A1H1X C15 C14 SING N N 15 A1H1X N3 C4 SING Y N 16 A1H1X C16 "C5'" SING N N 17 A1H1X N1 C14 SING N N 18 A1H1X N1 C6 SING N N 19 A1H1X C3 N2 SING N N 20 A1H1X C3 C2 SING N N 21 A1H1X C3 "C1'" SING N N 22 A1H1X C12 C2 SING N N 23 A1H1X C12 C6 SING N N 24 A1H1X C12 "O2'" SING N N 25 A1H1X N2 C11 SING Y N 26 A1H1X C14 "C5'" SING N N 27 A1H1X "C5'" "O5'" SING N N 28 A1H1X C6 O6 DOUB N N 29 A1H1X C4 C11 DOUB Y N 30 A1H1X C4 C5 SING N N 31 A1H1X "C2'" "C1'" SING N N 32 A1H1X "C2'" "O2'" SING N N 33 A1H1X "C2'" "C3'" SING N N 34 A1H1X C8 C5 DOUB Y N 35 A1H1X C8 C7 SING Y N 36 A1H1X F1 C7 SING N N 37 A1H1X "C1'" "O4'" SING N N 38 A1H1X "O3'" "C3'" SING N N 39 A1H1X C5 CAA SING Y N 40 A1H1X C7 C10 DOUB Y N 41 A1H1X CAA C9 DOUB Y N 42 A1H1X C10 C9 SING Y N 43 A1H1X C10 F3 SING N N 44 A1H1X C9 F2 SING N N 45 A1H1X C8 H6 SING N N 46 A1H1X C15 H11 SING N N 47 A1H1X C15 H12 SING N N 48 A1H1X C21 H18 SING N N 49 A1H1X C1 H2 SING N N 50 A1H1X C1 H3 SING N N 51 A1H1X C1 H1 SING N N 52 A1H1X C2 H4 SING N N 53 A1H1X C3 H5 SING N N 54 A1H1X CAA H7 SING N N 55 A1H1X C11 H8 SING N N 56 A1H1X C12 H9 SING N N 57 A1H1X C14 H10 SING N N 58 A1H1X C16 H13 SING N N 59 A1H1X C16 H14 SING N N 60 A1H1X "C5'" H15 SING N N 61 A1H1X "O5'" H16 SING N N 62 A1H1X C19 H17 SING N N 63 A1H1X C23 H19 SING N N 64 A1H1X "C2'" H20 SING N N 65 A1H1X "C3'" H21 SING N N 66 A1H1X "C3'" H22 SING N N 67 A1H1X "O3'" H23 SING N N 68 A1H1X "C1'" H24 SING N N 69 A1H1X "O4'" H25 SING N N 70 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1H1X InChI InChI 1.06 "InChI=1S/C26H25Cl2F3N4O6/c1-40-24-22(34-9-17(32-33-34)11-4-15(29)21(31)16(30)5-11)23(38)20(10-36)41-25(24)26(39)35(18-2-3-19(18)37)14-7-12(27)6-13(28)8-14/h4-9,18-20,22-25,36-38H,2-3,10H2,1H3/t18-,19-,20+,22-,23-,24+,25+/m0/s1" A1H1X InChIKey InChI 1.06 ADYGFYLMWYMRNG-GRVGWMENSA-N A1H1X SMILES_CANONICAL CACTVS 3.385 "CO[C@H]1[C@@H](O[C@H](CO)[C@H](O)[C@@H]1n2cc(nn2)c3cc(F)c(F)c(F)c3)C(=O)N([C@H]4CC[C@@H]4O)c5cc(Cl)cc(Cl)c5" A1H1X SMILES CACTVS 3.385 "CO[CH]1[CH](O[CH](CO)[CH](O)[CH]1n2cc(nn2)c3cc(F)c(F)c(F)c3)C(=O)N([CH]4CC[CH]4O)c5cc(Cl)cc(Cl)c5" A1H1X SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CO[C@@H]1[C@H]([C@H]([C@H](O[C@H]1C(=O)N(c2cc(cc(c2)Cl)Cl)[C@H]3CC[C@@H]3O)CO)O)n4cc(nn4)c5cc(c(c(c5)F)F)F" A1H1X SMILES "OpenEye OEToolkits" 2.0.7 "COC1C(C(C(OC1C(=O)N(c2cc(cc(c2)Cl)Cl)C3CCC3O)CO)O)n4cc(nn4)c5cc(c(c(c5)F)F)F" # _pdbx_chem_comp_identifier.comp_id A1H1X _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{R},3~{R},4~{S},5~{R},6~{R})-~{N}-[3,5-bis(chloranyl)phenyl]-6-(hydroxymethyl)-3-methoxy-5-oxidanyl-~{N}-[(1~{S},2~{S})-2-oxidanylcyclobutyl]-4-[4-[3,4,5-tris(fluoranyl)phenyl]-1,2,3-triazol-1-yl]oxane-2-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1H1X "Create component" 2024-01-09 PDBE A1H1X "Initial release" 2025-01-29 RCSB #