data_A1H2E # _chem_comp.id A1H2E _chem_comp.name "1-[(4~{R})-4-azanyl-4-diphenoxyphosphoryl-butyl]guanidine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H24 N4 O3 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 2024-01-17 _chem_comp.pdbx_modified_date 2024-01-26 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 363.371 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1H2E _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7QFT _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1H2E O1 O1 O 0 1 N N N N N N 22.562 6.514 -41.751 -0.671 1.962 0.258 O1 A1H2E 1 A1H2E CA C1 C 0 1 N N R N N N 21.874 8.891 -43.156 0.350 0.721 -1.917 CA A1H2E 2 A1H2E CB C2 C 0 1 N N N N N N 20.366 8.833 -42.900 1.706 1.327 -1.552 CB A1H2E 3 A1H2E CG C3 C 0 1 N N N N N N 19.997 10.233 -42.443 2.402 0.436 -0.521 CG A1H2E 4 A1H2E CD C4 C 0 1 N N N N N N 18.477 10.386 -42.383 3.821 0.952 -0.275 CD A1H2E 5 A1H2E CZ C5 C 0 1 N N N N N N 17.032 12.211 -41.560 5.773 0.368 1.092 CZ A1H2E 6 A1H2E CCT C6 C 0 1 Y N N N N N 25.169 6.954 -43.428 -0.492 -1.755 0.181 CCT A1H2E 7 A1H2E CCU C7 C 0 1 Y N N N N N 25.874 5.792 -43.750 -1.449 -2.466 0.890 CCU A1H2E 8 A1H2E CCV C8 C 0 1 Y N N N N N 27.141 5.585 -43.210 -1.787 -3.747 0.499 CCV A1H2E 9 A1H2E CCW C9 C 0 1 Y N N N N N 27.691 6.537 -42.358 -1.172 -4.321 -0.599 CCW A1H2E 10 A1H2E CCX C10 C 0 1 Y N N N N N 26.989 7.689 -42.040 -0.217 -3.614 -1.307 CCX A1H2E 11 A1H2E CCY C11 C 0 1 Y N N N N N 25.728 7.909 -42.573 0.123 -2.332 -0.920 CCY A1H2E 12 A1H2E N N1 N 0 1 N N N N N N 22.085 9.476 -44.479 -0.298 1.552 -2.941 N A1H2E 13 A1H2E NE N2 N 0 1 N N N N N N 18.240 11.738 -41.881 4.487 0.099 0.712 NE A1H2E 14 A1H2E NH1 N3 N 0 1 N N N N N N 16.937 13.461 -41.104 6.420 1.406 0.564 NH1 A1H2E 15 A1H2E NH2 N4 N 1 1 N N N N N N 15.937 11.460 -41.743 6.379 -0.408 1.989 NH2 A1H2E 16 A1H2E OCS O2 O 0 1 N N N N N N 23.928 7.134 -43.959 -0.162 -0.492 0.560 OCS A1H2E 17 A1H2E PAD P1 P 0 1 N N N N N N 22.608 7.218 -43.073 -0.706 0.653 -0.433 PAD A1H2E 18 A1H2E HA H1 H 0 1 N N N N N N 22.366 9.491 -42.376 0.495 -0.287 -2.306 HA A1H2E 19 A1H2E HB2 H2 H 0 1 N N N N N N 19.826 8.571 -43.822 2.325 1.399 -2.446 HB2 A1H2E 20 A1H2E HB3 H3 H 0 1 N N N N N N 20.134 8.096 -42.117 1.558 2.322 -1.131 HB3 A1H2E 21 A1H2E HG2 H4 H 0 1 N N N N N N 20.420 10.412 -41.443 1.841 0.456 0.414 HG2 A1H2E 22 A1H2E HG3 H5 H 0 1 N N N N N N 20.408 10.967 -43.152 2.446 -0.586 -0.895 HG3 A1H2E 23 A1H2E HD2 H6 H 0 1 N N N N N N 18.039 10.266 -43.385 4.381 0.932 -1.210 HD2 A1H2E 24 A1H2E HD3 H7 H 0 1 N N N N N N 18.042 9.641 -41.701 3.776 1.975 0.099 HD3 A1H2E 25 A1H2E H8 H8 H 0 1 N N N N N N 25.439 5.059 -44.413 -1.929 -2.018 1.748 H8 A1H2E 26 A1H2E H9 H9 H 0 1 N N N N N N 27.694 4.689 -43.452 -2.532 -4.301 1.051 H9 A1H2E 27 A1H2E H10 H10 H 0 1 N N N N N N 28.674 6.377 -41.940 -1.437 -5.323 -0.903 H10 A1H2E 28 A1H2E H11 H11 H 0 1 N N N N N N 27.426 8.418 -41.374 0.262 -4.065 -2.164 H11 A1H2E 29 A1H2E H12 H12 H 0 1 N N N N N N 25.183 8.809 -42.330 0.868 -1.781 -1.474 H12 A1H2E 30 A1H2E H H13 H 0 1 N N N N N N 21.679 10.389 -44.509 -0.444 2.492 -2.605 H A1H2E 31 A1H2E H2 H14 H 0 1 N N N N N N 23.066 9.542 -44.662 0.236 1.553 -3.797 H2 A1H2E 32 A1H2E HE H16 H 0 1 N N N N N N 19.028 12.344 -41.771 4.016 -0.657 1.096 HE A1H2E 33 A1H2E HH11 H17 H 0 0 N N N N N N 16.040 13.850 -40.894 5.979 1.971 -0.090 HH11 A1H2E 34 A1H2E HH12 H18 H 0 0 N N N N N N 17.763 14.009 -40.972 7.332 1.597 0.834 HH12 A1H2E 35 A1H2E HH21 H19 H 0 0 N N N N N N 15.033 11.835 -41.537 5.908 -1.164 2.374 HH21 A1H2E 36 A1H2E O2 O3 O 0 1 N Y N N N N ? ? ? -2.219 0.315 -0.865 O2 A1H2E 37 A1H2E C2 C12 C 0 1 Y Y N N N N ? ? ? -3.157 0.752 0.016 C2 A1H2E 38 A1H2E C3 C13 C 0 1 Y Y N N N N ? ? ? -3.690 2.027 -0.112 C3 A1H2E 39 A1H2E C4 C14 C 0 1 Y Y N N N N ? ? ? -4.643 2.469 0.785 C4 A1H2E 40 A1H2E C5 C15 C 0 1 Y Y N N N N ? ? ? -5.065 1.643 1.810 C5 A1H2E 41 A1H2E C6 C16 C 0 1 Y Y N N N N ? ? ? -4.535 0.373 1.940 C6 A1H2E 42 A1H2E C7 C17 C 0 1 Y Y N N N N ? ? ? -3.586 -0.077 1.042 C7 A1H2E 43 A1H2E H15 H15 H 0 1 N Y N N N N ? ? ? -3.360 2.672 -0.913 H15 A1H2E 44 A1H2E H20 H20 H 0 1 N Y N N N N ? ? ? -5.058 3.461 0.685 H20 A1H2E 45 A1H2E H21 H21 H 0 1 N Y N N N N ? ? ? -5.810 1.991 2.510 H21 A1H2E 46 A1H2E H22 H22 H 0 1 N Y N N N N ? ? ? -4.866 -0.270 2.742 H22 A1H2E 47 A1H2E H23 H23 H 0 1 N Y N N N N ? ? ? -3.173 -1.069 1.144 H23 A1H2E 48 A1H2E HH22 HH22 H 0 0 N Y N N N N 16.024 10.525 -42.086 7.291 -0.217 2.259 HH22 A1H2E 49 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1H2E N CA SING N N 1 A1H2E OCS CCT SING N N 2 A1H2E OCS PAD SING N N 3 A1H2E CCU CCT DOUB Y N 4 A1H2E CCU CCV SING Y N 5 A1H2E CCT CCY SING Y N 6 A1H2E CCV CCW DOUB Y N 7 A1H2E CA PAD SING N N 8 A1H2E CA CB SING N N 9 A1H2E PAD O1 DOUB N N 10 A1H2E CB CG SING N N 11 A1H2E CCY CCX DOUB Y N 12 A1H2E CG CD SING N N 13 A1H2E CD NE SING N N 14 A1H2E CCW CCX SING Y N 15 A1H2E NE CZ SING N N 16 A1H2E NH2 CZ DOUB N N 17 A1H2E CZ NH1 SING N N 18 A1H2E CA HA SING N N 19 A1H2E CB HB2 SING N N 20 A1H2E CB HB3 SING N N 21 A1H2E CG HG2 SING N N 22 A1H2E CG HG3 SING N N 23 A1H2E CD HD2 SING N N 24 A1H2E CD HD3 SING N N 25 A1H2E CCU H8 SING N N 26 A1H2E CCV H9 SING N N 27 A1H2E CCW H10 SING N N 28 A1H2E CCX H11 SING N N 29 A1H2E CCY H12 SING N N 30 A1H2E N H SING N N 31 A1H2E N H2 SING N N 32 A1H2E NE HE SING N N 33 A1H2E NH1 HH11 SING N N 34 A1H2E NH1 HH12 SING N N 35 A1H2E NH2 HH21 SING N N 36 A1H2E PAD O2 SING N N 37 A1H2E O2 C2 SING N N 38 A1H2E C2 C3 SING Y N 39 A1H2E C3 C4 DOUB Y N 40 A1H2E C4 C5 SING Y N 41 A1H2E C5 C6 DOUB Y N 42 A1H2E C6 C7 SING Y N 43 A1H2E C7 C2 DOUB Y N 44 A1H2E C3 H15 SING N N 45 A1H2E C4 H20 SING N N 46 A1H2E C5 H21 SING N N 47 A1H2E C6 H22 SING N N 48 A1H2E C7 H23 SING N N 49 A1H2E NH2 HH22 SING N N 50 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1H2E InChI InChI 1.06 "InChI=1S/C17H23N4O3P/c18-16(12-7-13-21-17(19)20)25(22,23-14-8-3-1-4-9-14)24-15-10-5-2-6-11-15/h1-6,8-11,16H,7,12-13,18H2,(H4,19,20,21)/p+1/t16-/m1/s1" A1H2E InChIKey InChI 1.06 HAWUDUJVQROPQS-MRXNPFEDSA-O A1H2E SMILES_CANONICAL CACTVS 3.385 "N[C@@H](CCCNC(N)=[NH2+])[P](=O)(Oc1ccccc1)Oc2ccccc2" A1H2E SMILES CACTVS 3.385 "N[CH](CCCNC(N)=[NH2+])[P](=O)(Oc1ccccc1)Oc2ccccc2" A1H2E SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)OP(=O)([C@H](CCCNC(=[NH2+])N)N)Oc2ccccc2" A1H2E SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)OP(=O)(C(CCCNC(=[NH2+])N)N)Oc2ccccc2" # _pdbx_chem_comp_identifier.comp_id A1H2E _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[azanyl-[[(4~{R})-4-azanyl-4-diphenoxyphosphoryl-butyl]amino]methylidene]azanium" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1H2E "Create component" 2024-01-17 PDBE A1H2E "Initial release" 2024-01-31 RCSB #