data_A1H3U # _chem_comp.id A1H3U _chem_comp.name "1-[[5-[5-(1~{H}-pyrazol-5-yl)pyridin-2-yl]oxypyridin-2-yl]methyl]piperidin-4-ol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H21 N5 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "LIPID FRAGMENT" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-02-06 _chem_comp.pdbx_modified_date 2024-03-15 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 351.402 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1H3U _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8RX9 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1H3U C1 C1 C 0 1 Y N N N N N -15.032 0.338 3.990 -3.519 -0.541 0.186 C1 A1H3U 1 A1H3U C2 C2 C 0 1 Y N N N N N -14.975 1.708 4.205 -4.692 0.161 -0.087 C2 A1H3U 2 A1H3U C3 C3 C 0 1 Y N N N N N -14.091 2.465 3.443 -4.621 1.541 -0.314 C3 A1H3U 3 A1H3U C13 C4 C 0 1 Y N N N N N -11.648 0.285 0.592 0.051 1.184 0.235 C13 A1H3U 4 A1H3U C14 C5 C 0 1 Y N N N N N -11.870 1.256 -0.385 0.472 0.355 -0.800 C14 A1H3U 5 A1H3U C15 C6 C 0 1 Y N N N N N -10.806 1.714 -1.154 1.594 -0.433 -0.597 C15 A1H3U 6 A1H3U C16 C7 C 0 1 Y N N N N N -9.541 1.176 -0.946 2.252 -0.370 0.617 C16 A1H3U 7 A1H3U C18 C8 C 0 1 Y N N N N N -10.369 -0.224 0.736 0.764 1.192 1.425 C18 A1H3U 8 A1H3U C19 C9 C 0 1 N N N N N N -8.336 1.631 -1.756 3.472 -1.224 0.845 C19 A1H3U 9 A1H3U C21 C10 C 0 1 N N N N N N -7.530 3.254 -0.130 4.746 -0.105 -0.883 C21 A1H3U 10 A1H3U C22 C11 C 0 1 N N N N N N -6.258 4.054 0.201 5.933 0.827 -1.133 C22 A1H3U 11 A1H3U C23 C12 C 0 1 N N N N N N -5.120 3.095 0.588 7.224 0.131 -0.694 C23 A1H3U 12 A1H3U C24 C13 C 0 1 N N N N N N -4.732 2.272 -0.650 7.110 -0.254 0.783 C24 A1H3U 13 A1H3U C25 C14 C 0 1 N N N N N N -5.925 2.133 -1.616 5.889 -1.155 0.978 C25 A1H3U 14 A1H3U C4 C15 C 0 1 Y N N N N N -13.301 1.832 2.486 -3.384 2.152 -0.257 C4 A1H3U 15 A1H3U C5 C16 C 0 1 Y N N N N N -13.402 0.452 2.314 -2.259 1.384 0.022 C5 A1H3U 16 A1H3U N6 N1 N 0 1 Y N N N N N -14.262 -0.244 3.068 -2.360 0.082 0.237 N6 A1H3U 17 A1H3U O7 O1 O 0 1 N N N N N N -12.652 -0.257 1.386 -1.041 1.979 0.080 O7 A1H3U 18 A1H3U C8 C17 C 0 1 Y N N N N N -17.033 2.619 7.130 -7.567 -2.124 -0.075 C8 A1H3U 19 A1H3U C9 C18 C 0 1 Y N N N N N -16.199 1.678 6.390 -6.200 -1.878 0.062 C9 A1H3U 20 A1H3U C10 C19 C 0 1 Y N N N N N -15.854 2.311 5.271 -5.993 -0.542 -0.138 C10 A1H3U 21 A1H3U N11 N2 N 0 1 Y N N N N N -16.387 3.492 5.286 -7.207 0.023 -0.393 N11 A1H3U 22 A1H3U N12 N3 N 0 1 Y N N N N N -17.098 3.653 6.412 -8.168 -0.995 -0.352 N12 A1H3U 23 A1H3U N17 N4 N 0 1 Y N N N N N -9.362 0.233 -0.017 1.827 0.427 1.577 N17 A1H3U 24 A1H3U N20 N5 N 0 1 N N N N N N -7.208 2.035 -0.900 4.680 -0.443 0.544 N20 A1H3U 25 A1H3U O26 O2 O 0 1 N N N N N N -4.009 3.889 1.022 7.423 -1.046 -1.480 O26 A1H3U 26 A1H3U H1 H1 H 0 1 N N N N N N -15.709 -0.265 4.577 -3.562 -1.606 0.363 H1 A1H3U 27 A1H3U H2 H2 H 0 1 N N N N N N -14.018 3.532 3.592 -5.511 2.113 -0.529 H2 A1H3U 28 A1H3U H3 H3 H 0 1 N N N N N N -12.863 1.650 -0.543 -0.062 0.326 -1.738 H3 A1H3U 29 A1H3U H4 H4 H 0 1 N N N N N N -10.960 2.477 -1.903 1.949 -1.089 -1.378 H4 A1H3U 30 A1H3U H5 H5 H 0 1 N N N N N N -10.182 -0.999 1.465 0.449 1.836 2.233 H5 A1H3U 31 A1H3U H6 H6 H 0 1 N N N N N N -8.011 0.802 -2.402 3.499 -1.548 1.885 H6 A1H3U 32 A1H3U H7 H7 H 0 1 N N N N N N -8.632 2.488 -2.379 3.433 -2.097 0.193 H7 A1H3U 33 A1H3U H8 H8 H 0 1 N N N N N N -8.207 3.886 -0.724 3.823 0.394 -1.181 H8 A1H3U 34 A1H3U H9 H9 H 0 1 N N N N N N -8.027 2.965 0.808 4.871 -1.017 -1.467 H9 A1H3U 35 A1H3U H10 H10 H 0 1 N N N N N N -5.957 4.640 -0.680 5.991 1.066 -2.195 H10 A1H3U 36 A1H3U H11 H11 H 0 1 N N N N N N -6.463 4.734 1.041 5.802 1.745 -0.561 H11 A1H3U 37 A1H3U H12 H12 H 0 1 N N N N N N -5.461 2.421 1.387 8.068 0.807 -0.832 H12 A1H3U 38 A1H3U H13 H13 H 0 1 N N N N N N -4.410 1.270 -0.330 8.009 -0.789 1.090 H13 A1H3U 39 A1H3U H14 H14 H 0 1 N N N N N N -3.904 2.774 -1.171 6.998 0.647 1.386 H14 A1H3U 40 A1H3U H15 H15 H 0 1 N N N N N N -5.787 1.226 -2.222 6.008 -2.062 0.386 H15 A1H3U 41 A1H3U H16 H16 H 0 1 N N N N N N -5.953 3.013 -2.275 5.796 -1.419 2.032 H16 A1H3U 42 A1H3U H17 H17 H 0 1 N N N N N N -12.615 2.406 1.881 -3.291 3.215 -0.426 H17 A1H3U 43 A1H3U H18 H18 H 0 1 N N N N N N -17.498 2.462 8.092 -8.047 -3.086 0.026 H18 A1H3U 44 A1H3U H19 H19 H 0 1 N N N N N N -15.920 0.678 6.688 -5.441 -2.613 0.287 H19 A1H3U 45 A1H3U H20 H20 H 0 1 N N N N N N -16.284 4.179 4.567 -7.375 0.961 -0.575 H20 A1H3U 46 A1H3U H22 H22 H 0 1 N N N N N N -4.259 4.393 1.787 8.224 -1.539 -1.256 H22 A1H3U 47 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1H3U C19 C16 SING N N 1 A1H3U C19 N20 SING N N 2 A1H3U C25 N20 SING N N 3 A1H3U C25 C24 SING N N 4 A1H3U C15 C16 DOUB Y N 5 A1H3U C15 C14 SING Y N 6 A1H3U C16 N17 SING Y N 7 A1H3U N20 C21 SING N N 8 A1H3U C24 C23 SING N N 9 A1H3U C14 C13 DOUB Y N 10 A1H3U C21 C22 SING N N 11 A1H3U N17 C18 DOUB Y N 12 A1H3U C22 C23 SING N N 13 A1H3U C23 O26 SING N N 14 A1H3U C13 C18 SING Y N 15 A1H3U C13 O7 SING N N 16 A1H3U O7 C5 SING N N 17 A1H3U C5 C4 DOUB Y N 18 A1H3U C5 N6 SING Y N 19 A1H3U C4 C3 SING Y N 20 A1H3U N6 C1 DOUB Y N 21 A1H3U C3 C2 DOUB Y N 22 A1H3U C1 C2 SING Y N 23 A1H3U C2 C10 SING N N 24 A1H3U C10 N11 SING Y N 25 A1H3U C10 C9 DOUB Y N 26 A1H3U N11 N12 SING Y N 27 A1H3U C9 C8 SING Y N 28 A1H3U N12 C8 DOUB Y N 29 A1H3U C1 H1 SING N N 30 A1H3U C3 H2 SING N N 31 A1H3U C14 H3 SING N N 32 A1H3U C15 H4 SING N N 33 A1H3U C18 H5 SING N N 34 A1H3U C19 H6 SING N N 35 A1H3U C19 H7 SING N N 36 A1H3U C21 H8 SING N N 37 A1H3U C21 H9 SING N N 38 A1H3U C22 H10 SING N N 39 A1H3U C22 H11 SING N N 40 A1H3U C23 H12 SING N N 41 A1H3U C24 H13 SING N N 42 A1H3U C24 H14 SING N N 43 A1H3U C25 H15 SING N N 44 A1H3U C25 H16 SING N N 45 A1H3U C4 H17 SING N N 46 A1H3U C8 H18 SING N N 47 A1H3U C9 H19 SING N N 48 A1H3U N11 H20 SING N N 49 A1H3U O26 H22 SING N N 50 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1H3U InChI InChI 1.06 "InChI=1S/C19H21N5O2/c25-16-6-9-24(10-7-16)13-15-2-3-17(12-20-15)26-19-4-1-14(11-21-19)18-5-8-22-23-18/h1-5,8,11-12,16,25H,6-7,9-10,13H2,(H,22,23)" A1H3U InChIKey InChI 1.06 UZAUVYWHEDBLBM-UHFFFAOYSA-N A1H3U SMILES_CANONICAL CACTVS 3.385 "OC1CCN(CC1)Cc2ccc(Oc3ccc(cn3)c4[nH]ncc4)cn2" A1H3U SMILES CACTVS 3.385 "OC1CCN(CC1)Cc2ccc(Oc3ccc(cn3)c4[nH]ncc4)cn2" A1H3U SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(ncc1c2ccn[nH]2)Oc3ccc(nc3)CN4CCC(CC4)O" A1H3U SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(ncc1c2ccn[nH]2)Oc3ccc(nc3)CN4CCC(CC4)O" # _pdbx_chem_comp_identifier.comp_id A1H3U _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "1-[[5-[5-(1~{H}-pyrazol-5-yl)pyridin-2-yl]oxypyridin-2-yl]methyl]piperidin-4-ol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1H3U "Create component" 2024-02-06 PDBE A1H3U "Initial release" 2024-03-20 RCSB #