data_A1H41 # _chem_comp.id A1H41 _chem_comp.name "4-(5-cyclopropyl-7~{H}-pyrrolo[2,3-d]pyrimidin-4-yl)-~{N}-[3-(3-methoxyphenyl)phenyl]-3,6-dihydro-2~{H}-pyridine-1-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C28 H27 N5 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-02-22 _chem_comp.pdbx_modified_date 2024-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 465.546 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1H41 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8S3X _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1H41 C1 C1 C 0 1 Y N N N N N 43.349 40.251 9.349 -7.874 -1.236 -0.250 C1 A1H41 1 A1H41 N N1 N 0 1 N N N N N N 36.744 37.207 8.643 -1.073 1.439 -0.318 N A1H41 2 A1H41 C2 C2 C 0 1 Y N N N N N 43.777 39.265 10.228 -7.451 -2.344 -0.972 C2 A1H41 3 A1H41 C3 C3 C 0 1 Y N N N N N 42.871 38.312 10.664 -6.125 -2.464 -1.347 C3 A1H41 4 A1H41 C4 C4 C 0 1 Y N N N N N 41.554 38.347 10.235 -5.216 -1.483 -1.005 C4 A1H41 5 A1H41 C C5 C 0 1 N N N N N N 45.565 41.141 9.155 -10.054 -2.185 -0.265 C A1H41 6 A1H41 O O1 O 0 1 N N N N N N 44.169 41.247 8.890 -9.177 -1.125 0.121 O A1H41 7 A1H41 C10 C6 C 0 1 Y N N N N N 36.994 39.596 8.233 -2.841 2.665 0.781 C10 A1H41 8 A1H41 C11 C7 C 0 1 Y N N N N N 37.523 38.383 8.656 -2.416 1.556 0.059 C11 A1H41 9 A1H41 C12 C8 C 0 1 N N N N N N 35.394 37.095 8.787 -0.109 1.997 0.441 C12 A1H41 10 A1H41 C13 C9 C 0 1 N N N N N N 33.498 35.488 8.954 2.258 2.234 1.066 C13 A1H41 11 A1H41 C14 C10 C 0 1 N N N N N N 32.757 35.248 7.653 2.977 1.032 1.684 C14 A1H41 12 A1H41 C15 C11 C 0 1 N N N N N N 33.489 34.228 6.840 3.262 -0.002 0.636 C15 A1H41 13 A1H41 C16 C12 C 0 1 N N N N N N 34.810 34.089 6.957 2.650 -0.070 -0.524 C16 A1H41 14 A1H41 C17 C13 C 0 1 N N N N N N 35.670 34.867 7.899 1.588 0.902 -0.958 C17 A1H41 15 A1H41 C18 C14 C 0 1 Y N N N N N 32.728 33.381 5.887 4.299 -1.010 0.927 C18 A1H41 16 A1H41 C19 C15 C 0 1 Y N N N N N 32.497 32.910 3.674 5.037 -2.833 2.135 C19 A1H41 17 A1H41 C20 C16 C 0 1 Y N N N N N 30.859 32.241 5.034 6.472 -2.005 0.538 C20 A1H41 18 A1H41 C21 C17 C 0 1 Y N N N N N 29.593 31.729 6.782 7.313 -0.729 -1.104 C21 A1H41 19 A1H41 C22 C18 C 0 1 Y N N N N N 30.676 32.377 7.301 6.098 -0.214 -0.848 C22 A1H41 20 A1H41 C23 C19 C 0 1 N N N N N N 30.963 32.648 8.754 5.460 0.967 -1.533 C23 A1H41 21 A1H41 C24 C20 C 0 1 N N N N N N 30.036 32.125 9.816 5.117 0.823 -3.017 C24 A1H41 22 A1H41 C25 C21 C 0 1 N N N N N N 30.076 33.575 9.539 6.289 1.706 -2.585 C25 A1H41 23 A1H41 C26 C22 C 0 1 Y N N N N N 31.507 32.729 6.181 5.514 -1.020 0.220 C26 A1H41 24 A1H41 C27 C23 C 0 1 Y N N N N N 38.863 38.306 9.019 -3.323 0.567 -0.289 C27 A1H41 25 A1H41 C5 C24 C 0 1 Y N N N N N 41.116 39.338 9.357 -5.634 -0.368 -0.281 C5 A1H41 26 A1H41 C6 C25 C 0 1 Y N N N N N 42.035 40.289 8.906 -6.969 -0.247 0.096 C6 A1H41 27 A1H41 C7 C26 C 0 1 Y N N N N N 39.692 39.425 8.952 -4.658 0.688 0.087 C7 A1H41 28 A1H41 C8 C27 C 0 1 Y N N N N N 39.145 40.631 8.513 -5.076 1.803 0.811 C8 A1H41 29 A1H41 C9 C28 C 0 1 Y N N N N N 37.807 40.714 8.161 -4.165 2.782 1.158 C9 A1H41 30 A1H41 N1 N2 N 0 1 N N N N N N 34.898 35.829 8.693 1.187 1.723 0.194 N1 A1H41 31 A1H41 N2 N3 N 0 1 Y N N N N N 33.241 33.437 4.646 4.111 -1.932 1.872 N2 A1H41 32 A1H41 N3 N4 N 0 1 Y N N N N N 31.305 32.321 3.771 6.186 -2.884 1.494 N3 A1H41 33 A1H41 N4 N5 N 0 1 Y N N N N N 29.694 31.644 5.419 7.548 -1.799 -0.282 N4 A1H41 34 A1H41 O1 O2 O 0 1 N N N N N N 34.653 38.047 8.990 -0.409 2.749 1.349 O1 A1H41 35 A1H41 H11 H1 H 0 1 N N N N N N 37.244 36.351 8.512 -0.836 0.956 -1.125 H11 A1H41 36 A1H41 H4 H2 H 0 1 N N N N N N 44.802 39.241 10.567 -8.158 -3.114 -1.241 H4 A1H41 37 A1H41 H5 H3 H 0 1 N N N N N N 43.193 37.536 11.343 -5.800 -3.328 -1.908 H5 A1H41 38 A1H41 H6 H4 H 0 1 N N N N N N 40.859 37.598 10.585 -4.181 -1.580 -1.298 H6 A1H41 39 A1H41 H3 H5 H 0 1 N N N N N N 46.087 42.009 8.727 -9.705 -3.122 0.169 H3 A1H41 40 A1H41 H1 H6 H 0 1 N N N N N N 45.731 41.113 10.242 -11.061 -1.972 0.093 H1 A1H41 41 A1H41 H2 H7 H 0 1 N N N N N N 45.955 40.218 8.701 -10.066 -2.269 -1.352 H2 A1H41 42 A1H41 H10 H8 H 0 1 N N N N N N 35.951 39.666 7.961 -2.134 3.435 1.051 H10 A1H41 43 A1H41 H13 H9 H 0 1 N N N N N N 33.456 34.576 9.568 1.828 2.852 1.855 H13 A1H41 44 A1H41 H12 H10 H 0 1 N N N N N N 33.019 36.317 9.496 2.962 2.824 0.479 H12 A1H41 45 A1H41 H15 H11 H 0 1 N N N N N N 31.743 34.883 7.871 3.916 1.363 2.128 H15 A1H41 46 A1H41 H14 H12 H 0 1 N N N N N N 32.694 36.190 7.088 2.349 0.596 2.460 H14 A1H41 47 A1H41 H16 H13 H 0 1 N N N N N N 35.294 33.360 6.324 2.924 -0.865 -1.202 H16 A1H41 48 A1H41 H18 H14 H 0 1 N N N N N N 36.171 34.165 8.582 1.982 1.545 -1.744 H18 A1H41 49 A1H41 H17 H15 H 0 1 N N N N N N 36.426 35.415 7.317 0.724 0.354 -1.333 H17 A1H41 50 A1H41 H19 H16 H 0 1 N N N N N N 32.914 32.968 2.679 4.843 -3.565 2.905 H19 A1H41 51 A1H41 H20 H17 H 0 1 N N N N N N 28.772 31.338 7.364 8.002 -0.354 -1.847 H20 A1H41 52 A1H41 H21 H18 H 0 1 N N N N N N 32.028 32.671 9.027 4.786 1.560 -0.915 H21 A1H41 53 A1H41 H23 H19 H 0 1 N N N N N N 29.152 31.536 9.530 5.352 -0.126 -3.498 H23 A1H41 54 A1H41 H22 H20 H 0 1 N N N N N N 30.447 31.735 10.759 4.217 1.322 -3.376 H22 A1H41 55 A1H41 H25 H21 H 0 1 N N N N N N 29.221 34.063 9.048 6.160 2.786 -2.660 H25 A1H41 56 A1H41 H24 H22 H 0 1 N N N N N N 30.517 34.262 10.276 7.296 1.338 -2.782 H24 A1H41 57 A1H41 H26 H23 H 0 1 N N N N N N 39.268 37.364 9.358 -2.995 -0.295 -0.850 H26 A1H41 58 A1H41 H7 H24 H 0 1 N N N N N N 41.722 41.055 8.212 -7.297 0.615 0.657 H7 A1H41 59 A1H41 H8 H25 H 0 1 N N N N N N 39.771 41.509 8.447 -6.110 1.900 1.104 H8 A1H41 60 A1H41 H9 H26 H 0 1 N N N N N N 37.397 41.656 7.829 -4.491 3.645 1.719 H9 A1H41 61 A1H41 H H27 H 0 1 N N N N N N 29.027 31.217 4.809 8.358 -2.333 -0.281 H A1H41 62 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1H41 C O SING N N 1 A1H41 O C1 SING N N 2 A1H41 C1 C2 DOUB Y N 3 A1H41 C2 C3 SING Y N 4 A1H41 C3 C4 DOUB Y N 5 A1H41 C4 C5 SING Y N 6 A1H41 C6 C5 DOUB Y N 7 A1H41 C1 C6 SING Y N 8 A1H41 C5 C7 SING N N 9 A1H41 C7 C8 DOUB Y N 10 A1H41 C8 C9 SING Y N 11 A1H41 C9 C10 DOUB Y N 12 A1H41 C10 C11 SING Y N 13 A1H41 C11 N SING N N 14 A1H41 N C12 SING N N 15 A1H41 C12 O1 DOUB N N 16 A1H41 N1 C12 SING N N 17 A1H41 N1 C13 SING N N 18 A1H41 C13 C14 SING N N 19 A1H41 C14 C15 SING N N 20 A1H41 C15 C16 DOUB N N 21 A1H41 C16 C17 SING N N 22 A1H41 C17 N1 SING N N 23 A1H41 C18 C15 SING N N 24 A1H41 C18 N2 DOUB Y N 25 A1H41 N2 C19 SING Y N 26 A1H41 C19 N3 DOUB Y N 27 A1H41 N3 C20 SING Y N 28 A1H41 C20 N4 SING Y N 29 A1H41 N4 C21 SING Y N 30 A1H41 C21 C22 DOUB Y N 31 A1H41 C23 C22 SING N N 32 A1H41 C23 C24 SING N N 33 A1H41 C24 C25 SING N N 34 A1H41 C25 C23 SING N N 35 A1H41 C22 C26 SING Y N 36 A1H41 C26 C18 SING Y N 37 A1H41 C20 C26 DOUB Y N 38 A1H41 C27 C11 DOUB Y N 39 A1H41 C7 C27 SING Y N 40 A1H41 N H11 SING N N 41 A1H41 C2 H4 SING N N 42 A1H41 C3 H5 SING N N 43 A1H41 C4 H6 SING N N 44 A1H41 C H3 SING N N 45 A1H41 C H1 SING N N 46 A1H41 C H2 SING N N 47 A1H41 C10 H10 SING N N 48 A1H41 C13 H13 SING N N 49 A1H41 C13 H12 SING N N 50 A1H41 C14 H15 SING N N 51 A1H41 C14 H14 SING N N 52 A1H41 C16 H16 SING N N 53 A1H41 C17 H18 SING N N 54 A1H41 C17 H17 SING N N 55 A1H41 C19 H19 SING N N 56 A1H41 C21 H20 SING N N 57 A1H41 C23 H21 SING N N 58 A1H41 C24 H23 SING N N 59 A1H41 C24 H22 SING N N 60 A1H41 C25 H25 SING N N 61 A1H41 C25 H24 SING N N 62 A1H41 C27 H26 SING N N 63 A1H41 C6 H7 SING N N 64 A1H41 C8 H8 SING N N 65 A1H41 C9 H9 SING N N 66 A1H41 N4 H SING N N 67 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1H41 InChI InChI 1.06 "InChI=1S/C28H27N5O2/c1-35-23-7-3-5-21(15-23)20-4-2-6-22(14-20)32-28(34)33-12-10-19(11-13-33)26-25-24(18-8-9-18)16-29-27(25)31-17-30-26/h2-7,10,14-18H,8-9,11-13H2,1H3,(H,32,34)(H,29,30,31)" A1H41 InChIKey InChI 1.06 ZEVYGJZIWQEHME-UHFFFAOYSA-N A1H41 SMILES_CANONICAL CACTVS 3.385 "COc1cccc(c1)c2cccc(NC(=O)N3CCC(=CC3)c4ncnc5[nH]cc(C6CC6)c45)c2" A1H41 SMILES CACTVS 3.385 "COc1cccc(c1)c2cccc(NC(=O)N3CCC(=CC3)c4ncnc5[nH]cc(C6CC6)c45)c2" A1H41 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1cccc(c1)c2cccc(c2)NC(=O)N3CCC(=CC3)c4c5c(c[nH]c5ncn4)C6CC6" A1H41 SMILES "OpenEye OEToolkits" 2.0.7 "COc1cccc(c1)c2cccc(c2)NC(=O)N3CCC(=CC3)c4c5c(c[nH]c5ncn4)C6CC6" # _pdbx_chem_comp_identifier.comp_id A1H41 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "4-(5-cyclopropyl-7~{H}-pyrrolo[2,3-d]pyrimidin-4-yl)-~{N}-[3-(3-methoxyphenyl)phenyl]-3,6-dihydro-2~{H}-pyridine-1-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1H41 "Create component" 2024-02-22 PDBE A1H41 "Initial release" 2024-03-06 RCSB #