data_A1H47 # _chem_comp.id A1H47 _chem_comp.name "~{N}-(1~{H}-indol-5-ylmethyl)-3-(pyridin-4-ylamino)benzamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H18 N4 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-02-23 _chem_comp.pdbx_modified_date 2025-01-24 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 342.394 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1H47 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8S4M _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1H47 C12 C1 C 0 1 Y N N N N N 59.658 -2.539 34.077 -0.618 -1.998 0.181 C12 A1H47 1 A1H47 C13 C2 C 0 1 Y N N N N N 58.328 -2.902 34.183 -1.480 -3.030 0.493 C13 A1H47 2 A1H47 C14 C3 C 0 1 Y N N N N N 57.357 -1.941 34.370 -2.846 -2.849 0.397 C14 A1H47 3 A1H47 C15 C4 C 0 1 Y N N N N N 57.710 -0.597 34.423 -3.363 -1.625 -0.014 C15 A1H47 4 A1H47 C1 C5 C 0 1 N N N N N N 61.476 -0.830 34.032 -0.205 0.343 -0.562 C1 A1H47 5 A1H47 C10 C6 C 0 1 Y N N N N N 64.096 0.271 30.235 4.078 0.957 0.587 C10 A1H47 6 A1H47 C11 C7 C 0 1 Y N N N N N 60.025 -1.200 34.126 -1.126 -0.764 -0.227 C11 A1H47 7 A1H47 C16 C8 C 0 1 Y N N N N N 55.931 0.552 35.756 -5.302 -0.190 0.108 C16 A1H47 8 A1H47 C17 C9 C 0 1 Y N N N N N 54.851 1.434 35.770 -6.484 0.190 -0.528 C17 A1H47 9 A1H47 C18 C10 C 0 1 Y N N N N N 54.100 1.547 36.909 -7.006 1.442 -0.282 C18 A1H47 10 A1H47 C19 C11 C 0 1 Y N N N N N 55.382 0.038 38.015 -5.281 1.955 1.164 C19 A1H47 11 A1H47 C2 C12 C 0 1 N N N N N N 63.248 -0.082 32.561 2.040 1.259 -0.804 C2 A1H47 12 A1H47 C20 C13 C 0 1 Y N N N N N 56.195 -0.150 36.930 -4.695 0.722 0.971 C20 A1H47 13 A1H47 C21 C14 C 0 1 Y N N N N N 59.053 -0.233 34.328 -2.505 -0.582 -0.329 C21 A1H47 14 A1H47 C3 C15 C 0 1 Y N N N N N 63.561 0.816 31.393 3.464 0.800 -0.624 C3 A1H47 15 A1H47 C4 C16 C 0 1 Y N N N N N 63.360 2.199 31.489 4.141 0.222 -1.688 C4 A1H47 16 A1H47 C5 C17 C 0 1 Y N N N N N 63.654 3.053 30.451 5.443 -0.205 -1.545 C5 A1H47 17 A1H47 C6 C18 C 0 1 Y N N N N N 64.178 2.499 29.287 6.088 -0.055 -0.322 C6 A1H47 18 A1H47 C7 C19 C 0 1 Y N N N N N 65.022 2.119 27.256 7.479 -0.005 1.442 C7 A1H47 19 A1H47 C8 C20 C 0 1 Y N N N N N 64.944 0.898 27.851 6.337 0.549 1.878 C8 A1H47 20 A1H47 C9 C21 C 0 1 Y N N N N N 64.406 1.111 29.158 5.399 0.538 0.753 C9 A1H47 21 A1H47 N1 N1 N 0 1 N N N N N N 61.858 -0.080 32.997 1.127 0.162 -0.473 N1 A1H47 22 A1H47 N2 N2 N 0 1 Y N N N N N 64.562 3.088 28.107 7.350 -0.370 0.130 N2 A1H47 23 A1H47 N3 N3 N 0 1 N N N N N N 56.751 0.401 34.632 -4.746 -1.447 -0.110 N3 A1H47 24 A1H47 N4 N4 N 0 1 Y N N N N N 54.336 0.870 38.036 -6.401 2.276 0.543 N4 A1H47 25 A1H47 O1 O1 O 0 1 N N N N N N 62.289 -1.299 34.824 -0.650 1.417 -0.918 O1 A1H47 26 A1H47 H10 H1 H 0 1 N N N N N N 60.415 -3.300 33.956 0.449 -2.144 0.258 H10 A1H47 27 A1H47 H11 H2 H 0 1 N N N N N N 58.048 -3.943 34.119 -1.084 -3.983 0.813 H11 A1H47 28 A1H47 H12 H3 H 0 1 N N N N N N 56.322 -2.232 34.475 -3.515 -3.661 0.642 H12 A1H47 29 A1H47 H9 H4 H 0 1 N N N N N N 64.272 -0.792 30.164 3.545 1.409 1.410 H9 A1H47 30 A1H47 H14 H5 H 0 1 N N N N N N 54.611 2.019 34.895 -6.984 -0.488 -1.205 H14 A1H47 31 A1H47 H15 H6 H 0 1 N N N N N N 53.262 2.228 36.895 -7.920 1.744 -0.770 H15 A1H47 32 A1H47 H16 H7 H 0 1 N N N N N N 55.600 -0.522 38.912 -4.818 2.667 1.831 H16 A1H47 33 A1H47 H2 H8 H 0 1 N N N N N N 63.870 0.237 33.410 1.844 2.105 -0.146 H2 A1H47 34 A1H47 H3 H9 H 0 1 N N N N N N 63.513 -1.111 32.278 1.884 1.561 -1.840 H3 A1H47 35 A1H47 H17 H10 H 0 1 N N N N N N 57.030 -0.833 36.983 -3.779 0.465 1.483 H17 A1H47 36 A1H47 H18 H11 H 0 1 N N N N N N 59.336 0.806 34.412 -2.904 0.369 -0.649 H18 A1H47 37 A1H47 H4 H12 H 0 1 N N N N N N 62.962 2.608 32.406 3.642 0.104 -2.639 H4 A1H47 38 A1H47 H5 H13 H 0 1 N N N N N N 63.484 4.116 30.537 5.961 -0.654 -2.379 H5 A1H47 39 A1H47 H7 H14 H 0 1 N N N N N N 65.393 2.298 26.258 8.369 -0.142 2.039 H7 A1H47 40 A1H47 H8 H15 H 0 1 N N N N N N 65.233 -0.049 27.419 6.146 0.931 2.870 H8 A1H47 41 A1H47 H1 H16 H 0 1 N N N N N N 61.187 0.486 32.518 1.482 -0.695 -0.189 H1 A1H47 42 A1H47 H6 H17 H 0 1 N N N N N N 64.513 4.066 27.903 8.044 -0.789 -0.403 H6 A1H47 43 A1H47 H13 H18 H 0 1 N N N N N N 56.640 1.076 33.903 -5.318 -2.200 -0.328 H13 A1H47 44 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1H47 O1 C1 DOUB N N 1 A1H47 C1 N1 SING N N 2 A1H47 N1 C2 SING N N 3 A1H47 C2 C3 SING N N 4 A1H47 C3 C4 DOUB Y N 5 A1H47 C4 C5 SING Y N 6 A1H47 C5 C6 DOUB Y N 7 A1H47 C6 N2 SING Y N 8 A1H47 N2 C7 SING Y N 9 A1H47 C7 C8 DOUB Y N 10 A1H47 C8 C9 SING Y N 11 A1H47 C9 C10 DOUB Y N 12 A1H47 C1 C11 SING N N 13 A1H47 C11 C12 DOUB Y N 14 A1H47 C12 C13 SING Y N 15 A1H47 C13 C14 DOUB Y N 16 A1H47 C14 C15 SING Y N 17 A1H47 C15 N3 SING N N 18 A1H47 N3 C16 SING N N 19 A1H47 C16 C17 DOUB Y N 20 A1H47 C17 C18 SING Y N 21 A1H47 C18 N4 DOUB Y N 22 A1H47 N4 C19 SING Y N 23 A1H47 C19 C20 DOUB Y N 24 A1H47 C15 C21 DOUB Y N 25 A1H47 C3 C10 SING Y N 26 A1H47 C11 C21 SING Y N 27 A1H47 C6 C9 SING Y N 28 A1H47 C16 C20 SING Y N 29 A1H47 C12 H10 SING N N 30 A1H47 C13 H11 SING N N 31 A1H47 C14 H12 SING N N 32 A1H47 C10 H9 SING N N 33 A1H47 C17 H14 SING N N 34 A1H47 C18 H15 SING N N 35 A1H47 C19 H16 SING N N 36 A1H47 C2 H2 SING N N 37 A1H47 C2 H3 SING N N 38 A1H47 C20 H17 SING N N 39 A1H47 C21 H18 SING N N 40 A1H47 C4 H4 SING N N 41 A1H47 C5 H5 SING N N 42 A1H47 C7 H7 SING N N 43 A1H47 C8 H8 SING N N 44 A1H47 N1 H1 SING N N 45 A1H47 N2 H6 SING N N 46 A1H47 N3 H13 SING N N 47 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1H47 InChI InChI 1.06 "InChI=1S/C21H18N4O/c26-21(24-14-15-4-5-20-16(12-15)6-11-23-20)17-2-1-3-19(13-17)25-18-7-9-22-10-8-18/h1-13,23H,14H2,(H,22,25)(H,24,26)" A1H47 InChIKey InChI 1.06 SRUJVDMQDGZASI-UHFFFAOYSA-N A1H47 SMILES_CANONICAL CACTVS 3.385 "O=C(NCc1ccc2[nH]ccc2c1)c3cccc(Nc4ccncc4)c3" A1H47 SMILES CACTVS 3.385 "O=C(NCc1ccc2[nH]ccc2c1)c3cccc(Nc4ccncc4)c3" A1H47 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(cc(c1)Nc2ccncc2)C(=O)NCc3ccc4c(c3)cc[nH]4" A1H47 SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(cc(c1)Nc2ccncc2)C(=O)NCc3ccc4c(c3)cc[nH]4" # _pdbx_chem_comp_identifier.comp_id A1H47 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-(1~{H}-indol-5-ylmethyl)-3-(pyridin-4-ylamino)benzamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1H47 "Create component" 2024-02-23 PDBE A1H47 "Initial release" 2025-01-29 RCSB #