data_A1H5N # _chem_comp.id A1H5N _chem_comp.name 2-Imino-2-phenylethanol-lysine _chem_comp.type "L-peptide linking" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C14 H20 N2 O3" _chem_comp.mon_nstd_parent_comp_id LYS _chem_comp.pdbx_synonyms "(2S)-2-azanyl-6-[(E)-(2-oxidanyl-1-phenyl-ethylidene)amino]hexanoic acid" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-03-04 _chem_comp.pdbx_modified_date 2025-03-07 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 264.320 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1H5N _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8S7I _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1H5N N N1 N 0 1 N N N Y Y N 107.452 67.334 52.689 4.321 0.465 1.725 N A1H5N 1 A1H5N CA C1 C 0 1 N N S N Y N 107.119 67.620 54.031 3.969 -0.249 0.490 CA A1H5N 2 A1H5N C C2 C 0 1 N N N N Y Y 108.277 68.611 54.281 5.160 -0.271 -0.434 C A1H5N 3 A1H5N O O1 O 0 1 N N N N Y Y 109.424 68.797 54.059 6.053 0.530 -0.287 O A1H5N 4 A1H5N CB C3 C 0 1 N N N N N N 107.126 66.410 54.968 2.803 0.466 -0.197 CB A1H5N 5 A1H5N CG C4 C 0 1 N N N N N N 105.737 65.788 55.100 1.559 0.380 0.689 CG A1H5N 6 A1H5N CD C5 C 0 1 N N N N N N 105.847 64.412 55.763 0.394 1.094 0.002 CD A1H5N 7 A1H5N CE C6 C 0 1 N N N N N N 106.306 64.555 57.217 -0.851 1.008 0.888 CE A1H5N 8 A1H5N NZ N2 N 0 1 N N N N N N 106.064 63.337 57.981 -1.967 1.692 0.230 NZ A1H5N 9 A1H5N CAC C7 C 0 1 Y N N N N N 100.958 64.769 58.184 -2.997 -3.220 0.087 CAC A1H5N 10 A1H5N CAD C8 C 0 1 Y N N N N N 101.178 63.584 58.843 -2.036 -2.572 -0.668 CAD A1H5N 11 A1H5N CAE C9 C 0 1 Y N N N N N 102.014 65.415 57.585 -3.962 -2.493 0.762 CAE A1H5N 12 A1H5N CAF C10 C 0 1 Y N N N N N 102.451 63.050 58.900 -2.031 -1.194 -0.749 CAF A1H5N 13 A1H5N CAG C11 C 0 1 Y N N N N N 103.288 64.886 57.641 -3.972 -1.116 0.685 CAG A1H5N 14 A1H5N CAH C12 C 0 1 N N N N N N 104.941 61.665 59.205 -4.214 1.739 -0.686 CAH A1H5N 15 A1H5N CAI C13 C 0 1 N N N N N N 104.908 62.987 58.433 -3.003 1.019 -0.153 CAI A1H5N 16 A1H5N CAJ C14 C 0 1 Y N N N N N 103.534 63.686 58.300 -2.999 -0.455 -0.066 CAJ A1H5N 17 A1H5N OAB O2 O 0 1 N N N N N N 106.268 61.264 59.404 -3.976 3.148 -0.670 OAB A1H5N 18 A1H5N H H1 H 0 1 N N N Y Y N 106.796 66.679 52.315 4.595 1.415 1.528 H1 A1H5N 19 A1H5N H2 H2 H 0 1 N Y N Y Y N 107.424 68.177 52.152 3.560 0.438 2.388 H2 A1H5N 20 A1H5N HA H4 H 0 1 N N N N Y N 106.156 68.147 54.107 3.677 -1.271 0.731 HA A1H5N 21 A1H5N HB3 H8 H 0 1 N N N N N N 107.818 65.654 54.569 3.063 1.512 -0.358 HB3 A1H5N 22 A1H5N HB2 H9 H 0 1 N N N N N N 107.468 66.732 55.963 2.600 -0.010 -1.156 HB2 A1H5N 23 A1H5N HG2 H10 H 0 1 N N N N N N 105.101 66.441 55.716 1.300 -0.667 0.850 HG2 A1H5N 24 A1H5N HG3 H11 H 0 1 N N N N N N 105.290 65.678 54.101 1.762 0.855 1.648 HG3 A1H5N 25 A1H5N HD3 H12 H 0 1 N N N N N N 104.864 63.919 55.740 0.653 2.141 -0.159 HD3 A1H5N 26 A1H5N HD2 H13 H 0 1 N N N N N N 106.576 63.801 55.211 0.190 0.618 -0.957 HD2 A1H5N 27 A1H5N HE3 H14 H 0 1 N N N N N N 107.383 64.776 57.231 -1.110 -0.038 1.049 HE3 A1H5N 28 A1H5N HE2 H15 H 0 1 N N N N N N 105.755 65.385 57.685 -0.648 1.484 1.847 HE2 A1H5N 29 A1H5N HAC H16 H 0 1 N N N N N N 99.964 65.190 58.137 -2.996 -4.298 0.146 HAC A1H5N 30 A1H5N HAD H17 H 0 1 N N N N N N 100.355 63.069 59.317 -1.287 -3.145 -1.195 HAD A1H5N 31 A1H5N HAE H18 H 0 1 N N N N N N 101.845 66.346 57.065 -4.710 -3.006 1.349 HAE A1H5N 32 A1H5N HAF H19 H 0 1 N N N N N N 102.609 62.118 59.422 -1.280 -0.689 -1.338 HAF A1H5N 33 A1H5N HAG H20 H 0 1 N N N N N N 104.104 65.411 57.167 -4.726 -0.550 1.212 HAG A1H5N 34 A1H5N HAH3 H21 H 0 0 N N N N N N 104.450 61.799 60.180 -4.408 1.415 -1.709 HAH3 A1H5N 35 A1H5N HAH2 H22 H 0 0 N N N N N N 104.409 60.893 58.630 -5.078 1.509 -0.062 HAH2 A1H5N 36 A1H5N HAB H23 H 0 1 N N N N N N 106.283 60.444 59.883 -4.716 3.676 -1.002 HAB A1H5N 37 A1H5N OXT O3 O 0 1 N Y N N Y Y 107.681 69.600 54.941 5.227 -1.179 -1.420 O1 A1H5N 38 A1H5N HXT H3 H 0 1 N Y N N Y Y 108.310 70.290 55.114 6.010 -1.154 -1.987 H3 A1H5N 39 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1H5N N CA SING N N 1 A1H5N CA C SING N N 2 A1H5N CA CB SING N N 3 A1H5N O C DOUB N N 4 A1H5N CB CG SING N N 5 A1H5N CG CD SING N N 6 A1H5N CD CE SING N N 7 A1H5N CE NZ SING N N 8 A1H5N CAE CAG DOUB Y N 9 A1H5N CAE CAC SING Y N 10 A1H5N CAG CAJ SING Y N 11 A1H5N NZ CAI DOUB N N 12 A1H5N CAC CAD DOUB Y N 13 A1H5N CAJ CAI SING N N 14 A1H5N CAJ CAF DOUB Y N 15 A1H5N CAI CAH SING N N 16 A1H5N CAD CAF SING Y N 17 A1H5N CAH OAB SING N N 18 A1H5N N H SING N N 19 A1H5N N H2 SING N N 20 A1H5N CA HA SING N N 21 A1H5N CB HB3 SING N N 22 A1H5N CB HB2 SING N N 23 A1H5N CG HG2 SING N N 24 A1H5N CG HG3 SING N N 25 A1H5N CD HD3 SING N N 26 A1H5N CD HD2 SING N N 27 A1H5N CE HE3 SING N N 28 A1H5N CE HE2 SING N N 29 A1H5N CAC HAC SING N N 30 A1H5N CAD HAD SING N N 31 A1H5N CAE HAE SING N N 32 A1H5N CAF HAF SING N N 33 A1H5N CAG HAG SING N N 34 A1H5N CAH HAH3 SING N N 35 A1H5N CAH HAH2 SING N N 36 A1H5N OAB HAB SING N N 37 A1H5N C OXT SING N N 38 A1H5N OXT HXT SING N N 39 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1H5N InChI InChI 1.06 "InChI=1S/C14H20N2O3/c15-12(14(18)19)8-4-5-9-16-13(10-17)11-6-2-1-3-7-11/h1-3,6-7,12,17H,4-5,8-10,15H2,(H,18,19)/b16-13-/t12-/m0/s1" A1H5N InChIKey InChI 1.06 SASXLASNAWAAOC-OFEBGVABSA-N A1H5N SMILES_CANONICAL CACTVS 3.385 "N[C@@H](CCCCN=C(CO)c1ccccc1)C(O)=O" A1H5N SMILES CACTVS 3.385 "N[CH](CCCCN=C(CO)c1ccccc1)C(O)=O" A1H5N SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)/C(=N\CCCC[C@@H](C(=O)O)N)/CO" A1H5N SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)C(=NCCCCC(C(=O)O)N)CO" # _pdbx_chem_comp_identifier.comp_id A1H5N _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S})-2-azanyl-6-[(~{E})-(2-oxidanyl-1-phenyl-ethylidene)amino]hexanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1H5N "Create component" 2024-03-04 PDBE A1H5N "Modify PCM" 2024-09-27 PDBE A1H5N "Initial release" 2025-03-12 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id A1H5N _pdbx_chem_comp_synonyms.name "(2S)-2-azanyl-6-[(E)-(2-oxidanyl-1-phenyl-ethylidene)amino]hexanoic acid" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id A1H5N _pdbx_chem_comp_pcm.modified_residue_id LYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Non-standard residue" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom ? _pdbx_chem_comp_pcm.modified_residue_id_linking_atom ? _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #