data_A1H5Y # _chem_comp.id A1H5Y _chem_comp.name "(2~{R},3~{S},4~{R},5~{S},6~{S})-6-[(2~{S})-2,3-bis(oxidanyl)propoxy]-2-(hydroxymethyl)-5-(4-phenyl-1,2,3-triazol-1-yl)oxane-3,4-diol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H23 N3 O7" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-03-11 _chem_comp.pdbx_modified_date 2024-11-08 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 381.380 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1H5Y _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9EMR _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1H5Y C4 C1 C 0 1 N N S N N N -11.120 15.103 26.593 0.315 -0.959 -1.809 C4 A1H5Y 1 A1H5Y C5 C2 C 0 1 N N R N N N -10.263 15.464 25.384 1.048 0.338 -1.457 C5 A1H5Y 2 A1H5Y C6 C3 C 0 1 N N N N N N -9.916 16.914 25.305 0.582 1.457 -2.391 C6 A1H5Y 3 A1H5Y N2 N1 N 0 1 Y N N N N N -9.398 12.867 27.783 -0.990 -1.401 0.768 N2 A1H5Y 4 A1H5Y C3 C4 C 0 1 N N R N N N -11.429 13.623 26.567 0.742 -2.058 -0.831 C3 A1H5Y 5 A1H5Y C1 C5 C 0 1 N N S N N N -9.340 13.241 25.319 1.180 -0.273 0.858 C1 A1H5Y 6 A1H5Y C2 C6 C 0 1 N N S N N N -10.156 12.799 26.513 0.452 -1.595 0.600 C2 A1H5Y 7 A1H5Y CAM C7 C 0 1 N N N N N N -9.345 13.208 23.005 3.374 0.635 1.185 CAM A1H5Y 8 A1H5Y CAN C8 C 0 1 N N S N N N -10.359 13.072 21.790 4.859 0.308 1.020 CAN A1H5Y 9 A1H5Y CAO C9 C 0 1 N N N N N N -11.468 14.043 22.024 5.700 1.444 1.605 CAO A1H5Y 10 A1H5Y CAR C10 C 0 1 Y N N N N N -8.482 13.711 28.243 -1.680 -0.283 0.447 CAR A1H5Y 11 A1H5Y CAS C11 C 0 1 Y N N N N N -8.195 13.257 29.459 -2.983 -0.539 0.762 CAS A1H5Y 12 A1H5Y CAV C12 C 0 1 Y N N N N N -7.315 13.789 30.331 -4.137 0.379 0.595 CAV A1H5Y 13 A1H5Y CAW C13 C 0 1 Y N N N N N -7.262 13.312 31.635 -5.416 -0.032 0.966 CAW A1H5Y 14 A1H5Y CAX C14 C 0 1 Y N N N N N -6.366 13.857 32.554 -6.486 0.826 0.808 CAX A1H5Y 15 A1H5Y CAY C15 C 0 1 Y N N N N N -5.521 14.884 32.156 -6.291 2.090 0.283 CAY A1H5Y 16 A1H5Y CAZ C16 C 0 1 Y N N N N N -5.573 15.367 30.852 -5.024 2.503 -0.087 CAZ A1H5Y 17 A1H5Y CBA C17 C 0 1 Y N N N N N -6.471 14.824 29.943 -3.945 1.656 0.072 CBA A1H5Y 18 A1H5Y NAT N2 N 0 1 Y N N N N N -8.917 12.188 29.693 -3.010 -1.791 1.254 NAT A1H5Y 19 A1H5Y NAU N3 N 0 1 Y N N N N N -9.624 11.980 28.665 -1.816 -2.267 1.242 NAU A1H5Y 20 A1H5Y O1 O1 O 0 1 N N N N N N -10.114 12.935 24.151 2.590 -0.476 0.745 O1 A1H5Y 21 A1H5Y O3 O2 O 0 1 N N N N N N -12.196 13.308 27.725 0.008 -3.253 -1.105 O3 A1H5Y 22 A1H5Y O4 O3 O 0 1 N N N N N N -12.369 15.799 26.582 0.646 -1.349 -3.143 O4 A1H5Y 23 A1H5Y O5 O4 O 0 1 N N N N N N -9.038 14.667 25.390 0.760 0.696 -0.104 O5 A1H5Y 24 A1H5Y O6 O5 O 0 1 N N N N N N -9.069 17.169 26.534 1.348 2.637 -2.141 O6 A1H5Y 25 A1H5Y OAP O6 O 0 1 N N N N N N -12.362 13.875 20.828 7.083 1.088 1.557 OAP A1H5Y 26 A1H5Y OAQ O7 O 0 1 N N N N N N -10.873 11.718 21.751 5.163 0.157 -0.368 OAQ A1H5Y 27 A1H5Y H41 H1 H 0 1 N N N N N N -10.561 15.338 27.510 -0.761 -0.801 -1.732 H41 A1H5Y 28 A1H5Y H5 H2 H 0 1 N N N N N N -10.838 15.205 24.483 2.122 0.192 -1.574 H5 A1H5Y 29 A1H5Y H62 H3 H 0 1 N N N N N N -9.346 17.128 24.389 0.721 1.147 -3.427 H62 A1H5Y 30 A1H5Y H61 H4 H 0 1 N N N N N N -10.825 17.533 25.324 -0.473 1.664 -2.212 H61 A1H5Y 31 A1H5Y H31 H5 H 0 1 N N N N N N -12.019 13.407 25.664 1.809 -2.252 -0.944 H31 A1H5Y 32 A1H5Y H1 H6 H 0 1 N N N N N N -8.401 12.669 25.303 0.943 0.083 1.860 H1 A1H5Y 33 A1H5Y H2 H7 H 0 1 N N N N N N -10.447 11.751 26.347 0.803 -2.348 1.305 H2 A1H5Y 34 A1H5Y HAM H8 H 0 1 N N N N N N -8.525 12.482 22.907 3.161 0.837 2.235 HAM A1H5Y 35 A1H5Y H63 H9 H 0 1 N N N N N N -8.930 14.226 23.051 3.127 1.513 0.588 H63 A1H5Y 36 A1H5Y HAN H10 H 0 1 N N N N N N -9.831 13.317 20.856 5.088 -0.620 1.544 HAN A1H5Y 37 A1H5Y HAO H11 H 0 1 N N N N N N -11.081 15.071 22.081 5.538 2.352 1.024 HAO A1H5Y 38 A1H5Y H64 H12 H 0 1 N N N N N N -12.008 13.803 22.952 5.406 1.618 2.640 H64 A1H5Y 39 A1H5Y HAR H13 H 0 1 N N N N N N -8.064 14.572 27.742 -1.280 0.628 0.026 HAR A1H5Y 40 A1H5Y HAW H14 H 0 1 N N N N N N -7.921 12.512 31.939 -5.569 -1.019 1.376 HAW A1H5Y 41 A1H5Y HAX H15 H 0 1 N N N N N N -6.330 13.483 33.567 -7.478 0.509 1.096 HAX A1H5Y 42 A1H5Y HAY H16 H 0 1 N N N N N N -4.821 15.309 32.860 -7.131 2.758 0.161 HAY A1H5Y 43 A1H5Y HAZ H17 H 0 1 N N N N N N -4.914 16.166 30.546 -4.877 3.491 -0.498 HAZ A1H5Y 44 A1H5Y HBA H18 H 0 1 N N N N N N -6.514 15.206 28.934 -2.956 1.980 -0.213 HBA A1H5Y 45 A1H5Y H32 H19 H 0 1 N N N N N N -12.986 13.836 27.735 0.139 -3.599 -1.999 H32 A1H5Y 46 A1H5Y H42 H20 H 0 1 N N N N N N -12.876 15.552 27.346 0.405 -0.696 -3.815 H42 A1H5Y 47 A1H5Y H65 H21 H 0 1 N N N N N N -8.806 18.082 26.554 1.106 3.389 -2.699 H65 A1H5Y 48 A1H5Y HAP H22 H 0 1 N N N N N N -13.103 14.466 20.900 7.676 1.764 1.912 HAP A1H5Y 49 A1H5Y HAQ H23 H 0 1 N N N N N N -10.157 11.111 21.602 4.984 0.946 -0.898 HAQ A1H5Y 50 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1H5Y OAP CAO SING N N 1 A1H5Y OAQ CAN SING N N 2 A1H5Y CAN CAO SING N N 3 A1H5Y CAN CAM SING N N 4 A1H5Y CAM O1 SING N N 5 A1H5Y O1 C1 SING N N 6 A1H5Y C6 C5 SING N N 7 A1H5Y C6 O6 SING N N 8 A1H5Y C1 O5 SING N N 9 A1H5Y C1 C2 SING N N 10 A1H5Y C5 O5 SING N N 11 A1H5Y C5 C4 SING N N 12 A1H5Y C2 C3 SING N N 13 A1H5Y C2 N2 SING N N 14 A1H5Y C3 C4 SING N N 15 A1H5Y C3 O3 SING N N 16 A1H5Y O4 C4 SING N N 17 A1H5Y N2 CAR SING Y N 18 A1H5Y N2 NAU SING Y N 19 A1H5Y CAR CAS DOUB Y N 20 A1H5Y NAU NAT DOUB Y N 21 A1H5Y CAS NAT SING Y N 22 A1H5Y CAS CAV SING N N 23 A1H5Y CBA CAV DOUB Y N 24 A1H5Y CBA CAZ SING Y N 25 A1H5Y CAV CAW SING Y N 26 A1H5Y CAZ CAY DOUB Y N 27 A1H5Y CAW CAX DOUB Y N 28 A1H5Y CAY CAX SING Y N 29 A1H5Y C4 H41 SING N N 30 A1H5Y C5 H5 SING N N 31 A1H5Y C6 H62 SING N N 32 A1H5Y C6 H61 SING N N 33 A1H5Y C3 H31 SING N N 34 A1H5Y C1 H1 SING N N 35 A1H5Y C2 H2 SING N N 36 A1H5Y CAM HAM SING N N 37 A1H5Y CAM H63 SING N N 38 A1H5Y CAN HAN SING N N 39 A1H5Y CAO HAO SING N N 40 A1H5Y CAO H64 SING N N 41 A1H5Y CAR HAR SING N N 42 A1H5Y CAW HAW SING N N 43 A1H5Y CAX HAX SING N N 44 A1H5Y CAY HAY SING N N 45 A1H5Y CAZ HAZ SING N N 46 A1H5Y CBA HBA SING N N 47 A1H5Y O3 H32 SING N N 48 A1H5Y O4 H42 SING N N 49 A1H5Y O6 H65 SING N N 50 A1H5Y OAP HAP SING N N 51 A1H5Y OAQ HAQ SING N N 52 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1H5Y InChI InChI 1.06 "InChI=1S/C17H23N3O7/c21-7-11(23)9-26-17-14(16(25)15(24)13(8-22)27-17)20-6-12(18-19-20)10-4-2-1-3-5-10/h1-6,11,13-17,21-25H,7-9H2/t11-,13+,14-,15+,16+,17-/m0/s1" A1H5Y InChIKey InChI 1.06 GSGMTGQMFKHBQW-RLKGDUNQSA-N A1H5Y SMILES_CANONICAL CACTVS 3.385 "OC[C@H](O)CO[C@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@@H]1n2cc(nn2)c3ccccc3" A1H5Y SMILES CACTVS 3.385 "OC[CH](O)CO[CH]1O[CH](CO)[CH](O)[CH](O)[CH]1n2cc(nn2)c3ccccc3" A1H5Y SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)c2cn(nn2)[C@H]3[C@H]([C@@H]([C@H](O[C@@H]3OC[C@H](CO)O)CO)O)O" A1H5Y SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)c2cn(nn2)C3C(C(C(OC3OCC(CO)O)CO)O)O" # _pdbx_chem_comp_identifier.comp_id A1H5Y _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{R},3~{S},4~{R},5~{S},6~{S})-6-[(2~{S})-2,3-bis(oxidanyl)propoxy]-2-(hydroxymethyl)-5-(4-phenyl-1,2,3-triazol-1-yl)oxane-3,4-diol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1H5Y "Create component" 2024-03-11 PDBE A1H5Y "Initial release" 2024-11-13 RCSB #