data_A1H63 # _chem_comp.id A1H63 _chem_comp.name "5-[4-[(7-ethyl-6-oxidanylidene-5~{H}-1,5-naphthyridin-3-yl)methyl]piperazin-1-yl]-~{N}-methyl-pyridine-2-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H26 N6 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-03-27 _chem_comp.pdbx_modified_date 2024-11-29 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 406.481 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1H63 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9ETQ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1H63 C1 C1 C 0 1 N N N N N N 16.495 44.349 6.360 7.579 -2.153 0.798 C1 A1H63 1 A1H63 C2 C2 C 0 1 N N N N N N 15.156 43.664 6.219 6.426 -1.266 0.405 C2 A1H63 2 A1H63 C3 C3 C 0 1 N N N N N N 14.679 42.773 7.113 5.865 -0.443 1.323 C3 A1H63 3 A1H63 C7 C4 C 0 1 N N N N N N 9.618 40.206 6.468 1.500 2.868 -0.261 C7 A1H63 4 A1H63 C8 C5 C 0 1 N N N N N N 8.480 41.144 8.417 0.110 1.012 -0.960 C8 A1H63 5 A1H63 C9 C6 C 0 1 N N N N N N 7.214 41.870 8.875 -1.179 0.248 -0.649 C9 A1H63 6 A1H63 C10 C7 C 0 1 N N N N N N 5.956 40.736 7.109 -2.203 2.297 0.135 C10 A1H63 7 A1H63 C11 C8 C 0 1 N N N N N N 7.237 40.049 6.663 -0.913 3.060 -0.177 C11 A1H63 8 A1H63 C12 C9 C 0 1 Y N N N N N 4.829 41.336 9.253 -3.524 0.479 -0.576 C12 A1H63 9 A1H63 C13 C10 C 0 1 Y N N N N N 3.600 41.451 8.604 -3.841 -0.643 -1.340 C13 A1H63 10 A1H63 C14 C11 C 0 1 Y N N N N N 2.450 41.698 9.335 -5.040 -1.288 -1.097 C14 A1H63 11 A1H63 C15 C12 C 0 1 Y N N N N N 2.562 41.829 10.715 -5.886 -0.798 -0.102 C15 A1H63 12 A1H63 C16 C13 C 0 1 Y N N N N N 4.839 41.482 10.636 -4.420 0.911 0.402 C16 A1H63 13 A1H63 C19 C14 C 0 1 Y N N N N N 11.396 41.830 5.659 3.230 1.145 -0.819 C19 A1H63 14 A1H63 C20 C15 C 0 1 Y N N N N N 12.639 42.439 5.843 4.295 0.338 -0.420 C20 A1H63 15 A1H63 C21 C16 C 0 1 N N N N N N 14.366 43.996 5.045 5.938 -1.293 -0.921 C21 A1H63 16 A1H63 O1 O1 O 0 1 N N N N N N 14.717 44.788 4.180 6.460 -2.038 -1.733 O1 A1H63 17 A1H63 C C17 C 0 1 N N N N N N 17.341 43.910 7.570 7.050 -3.537 1.181 C A1H63 18 A1H63 N5 N1 N 0 1 N N N N N N 13.156 43.363 4.938 4.911 -0.516 -1.308 N5 A1H63 19 A1H63 C4 C18 C 0 1 Y N N N N N 13.406 42.121 6.980 4.744 0.408 0.911 C4 A1H63 20 A1H63 C6 C19 C 0 1 Y N N N N N 10.937 40.923 6.617 2.653 1.977 0.122 C6 A1H63 21 A1H63 C5 C20 C 0 1 Y N N N N N 11.763 40.661 7.700 3.148 1.994 1.419 C5 A1H63 22 A1H63 N N2 N 0 1 Y N N N N N 12.959 41.232 7.899 4.156 1.230 1.776 N A1H63 23 A1H63 N1 N3 N 0 1 N N N N N N 8.417 40.884 6.961 0.235 2.153 -0.043 N1 A1H63 24 A1H63 N2 N4 N 0 1 N N N N N N 6.024 41.083 8.535 -2.327 1.156 -0.783 N2 A1H63 25 A1H63 N3 N5 N 0 1 Y N N N N N 3.734 41.727 11.366 -5.550 0.275 0.606 N3 A1H63 26 A1H63 C17 C21 C 0 1 N N N N N N 1.331 42.094 11.541 -7.170 -1.480 0.167 C17 A1H63 27 A1H63 O O2 O 0 1 N N N N N N 0.217 42.178 11.021 -7.483 -2.462 -0.477 O A1H63 28 A1H63 N4 N6 N 0 1 N N N N N N 1.535 42.221 12.854 -7.993 -1.013 1.127 N4 A1H63 29 A1H63 C18 C22 C 0 1 N N N N N N 0.460 42.565 13.771 -9.265 -1.688 1.393 C18 A1H63 30 A1H63 H1 H1 H 0 1 N N N N N N 17.077 44.147 5.449 8.268 -2.247 -0.041 H1 A1H63 31 A1H63 H2 H2 H 0 1 N N N N N N 16.315 45.431 6.447 8.100 -1.715 1.650 H2 A1H63 32 A1H63 H3 H3 H 0 1 N N N N N N 15.287 42.538 7.974 6.235 -0.415 2.337 H3 A1H63 33 A1H63 H4 H4 H 0 1 N N N N N N 9.469 40.011 5.396 1.518 3.769 0.352 H4 A1H63 34 A1H63 H5 H5 H 0 1 N N N N N N 9.701 39.250 7.006 1.585 3.142 -1.312 H5 A1H63 35 A1H63 H6 H6 H 0 1 N N N N N N 8.566 40.188 8.954 0.965 0.348 -0.834 H6 A1H63 36 A1H63 H7 H7 H 0 1 N N N N N N 9.358 41.769 8.638 0.079 1.373 -1.988 H7 A1H63 37 A1H63 H8 H8 H 0 1 N N N N N N 7.253 42.016 9.965 -1.288 -0.582 -1.347 H8 A1H63 38 A1H63 H9 H9 H 0 1 N N N N N N 7.156 42.849 8.376 -1.137 -0.137 0.370 H9 A1H63 39 A1H63 H10 H10 H 0 1 N N N N N N 5.814 41.654 6.520 -2.172 1.936 1.163 H10 A1H63 40 A1H63 H11 H11 H 0 1 N N N N N N 5.106 40.059 6.942 -3.058 2.961 0.009 H11 A1H63 41 A1H63 H12 H12 H 0 1 N N N N N N 7.189 39.868 5.579 -0.956 3.445 -1.196 H12 A1H63 42 A1H63 H13 H13 H 0 1 N N N N N N 7.333 39.089 7.191 -0.804 3.890 0.521 H13 A1H63 43 A1H63 H14 H14 H 0 1 N N N N N N 3.545 41.347 7.530 -3.167 -1.000 -2.104 H14 A1H63 44 A1H63 H15 H15 H 0 1 N N N N N N 1.491 41.787 8.846 -5.317 -2.161 -1.670 H15 A1H63 45 A1H63 H16 H16 H 0 1 N N N N N N 5.784 41.394 11.152 -4.182 1.780 0.998 H16 A1H63 46 A1H63 H17 H17 H 0 1 N N N N N N 10.798 42.057 4.789 2.861 1.115 -1.834 H17 A1H63 47 A1H63 H18 H18 H 0 1 N N N N N N 18.289 44.468 7.577 6.529 -3.975 0.330 H18 A1H63 48 A1H63 H19 H19 H 0 1 N N N N N N 16.788 44.116 8.498 7.885 -4.179 1.465 H19 A1H63 49 A1H63 H20 H20 H 0 1 N N N N N N 17.550 42.832 7.500 6.361 -3.444 2.020 H20 A1H63 50 A1H63 H21 H21 H 0 1 N N N N N N 12.595 43.584 4.140 4.600 -0.557 -2.226 H21 A1H63 51 A1H63 H22 H22 H 0 1 N N N N N N 11.418 39.947 8.434 2.694 2.646 2.151 H22 A1H63 52 A1H63 H24 H24 H 0 1 N N N N N N 2.455 42.075 13.218 -7.742 -0.229 1.641 H24 A1H63 53 A1H63 H25 H25 H 0 1 N N N N N N 0.854 42.615 14.797 -9.790 -1.171 2.196 H25 A1H63 54 A1H63 H26 H26 H 0 1 N N N N N N 0.039 43.542 13.492 -9.878 -1.677 0.492 H26 A1H63 55 A1H63 H27 H27 H 0 1 N N N N N N -0.327 41.798 13.718 -9.074 -2.719 1.690 H27 A1H63 56 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1H63 O1 C21 DOUB N N 1 A1H63 N5 C21 SING N N 2 A1H63 N5 C20 SING N N 3 A1H63 C21 C2 SING N N 4 A1H63 C19 C20 DOUB Y N 5 A1H63 C19 C6 SING Y N 6 A1H63 C20 C4 SING Y N 7 A1H63 C2 C1 SING N N 8 A1H63 C2 C3 DOUB N N 9 A1H63 C1 C SING N N 10 A1H63 C7 C6 SING N N 11 A1H63 C7 N1 SING N N 12 A1H63 C6 C5 DOUB Y N 13 A1H63 C11 N1 SING N N 14 A1H63 C11 C10 SING N N 15 A1H63 N1 C8 SING N N 16 A1H63 C4 C3 SING N N 17 A1H63 C4 N DOUB Y N 18 A1H63 C10 N2 SING N N 19 A1H63 C5 N SING Y N 20 A1H63 C8 C9 SING N N 21 A1H63 N2 C9 SING N N 22 A1H63 N2 C12 SING N N 23 A1H63 C13 C12 DOUB Y N 24 A1H63 C13 C14 SING Y N 25 A1H63 C12 C16 SING Y N 26 A1H63 C14 C15 DOUB Y N 27 A1H63 C16 N3 DOUB Y N 28 A1H63 C15 N3 SING Y N 29 A1H63 C15 C17 SING N N 30 A1H63 O C17 DOUB N N 31 A1H63 C17 N4 SING N N 32 A1H63 N4 C18 SING N N 33 A1H63 C1 H1 SING N N 34 A1H63 C1 H2 SING N N 35 A1H63 C3 H3 SING N N 36 A1H63 C7 H4 SING N N 37 A1H63 C7 H5 SING N N 38 A1H63 C8 H6 SING N N 39 A1H63 C8 H7 SING N N 40 A1H63 C9 H8 SING N N 41 A1H63 C9 H9 SING N N 42 A1H63 C10 H10 SING N N 43 A1H63 C10 H11 SING N N 44 A1H63 C11 H12 SING N N 45 A1H63 C11 H13 SING N N 46 A1H63 C13 H14 SING N N 47 A1H63 C14 H15 SING N N 48 A1H63 C16 H16 SING N N 49 A1H63 C19 H17 SING N N 50 A1H63 C H18 SING N N 51 A1H63 C H19 SING N N 52 A1H63 C H20 SING N N 53 A1H63 N5 H21 SING N N 54 A1H63 C5 H22 SING N N 55 A1H63 N4 H24 SING N N 56 A1H63 C18 H25 SING N N 57 A1H63 C18 H26 SING N N 58 A1H63 C18 H27 SING N N 59 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1H63 InChI InChI 1.06 "InChI=1S/C22H26N6O2/c1-3-16-11-19-20(26-21(16)29)10-15(12-24-19)14-27-6-8-28(9-7-27)17-4-5-18(25-13-17)22(30)23-2/h4-5,10-13H,3,6-9,14H2,1-2H3,(H,23,30)(H,26,29)" A1H63 InChIKey InChI 1.06 WQAVGRAETZEADU-UHFFFAOYSA-N A1H63 SMILES_CANONICAL CACTVS 3.385 "CCC1=Cc2ncc(CN3CCN(CC3)c4ccc(nc4)C(=O)NC)cc2NC1=O" A1H63 SMILES CACTVS 3.385 "CCC1=Cc2ncc(CN3CCN(CC3)c4ccc(nc4)C(=O)NC)cc2NC1=O" A1H63 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCC1=Cc2c(cc(cn2)CN3CCN(CC3)c4ccc(nc4)C(=O)NC)NC1=O" A1H63 SMILES "OpenEye OEToolkits" 2.0.7 "CCC1=Cc2c(cc(cn2)CN3CCN(CC3)c4ccc(nc4)C(=O)NC)NC1=O" # _pdbx_chem_comp_identifier.comp_id A1H63 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "5-[4-[(7-ethyl-6-oxidanylidene-5~{H}-1,5-naphthyridin-3-yl)methyl]piperazin-1-yl]-~{N}-methyl-pyridine-2-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1H63 "Create component" 2024-03-27 PDBE A1H63 "Initial release" 2024-12-04 RCSB #