data_A1H6Z # _chem_comp.id A1H6Z _chem_comp.name "(2~{S})-2-azanyl-3-(6-azanylpyridin-3-yl)propanal" _chem_comp.type "L-peptide linking" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C8 H11 N3 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-03-27 _chem_comp.pdbx_modified_date 2025-02-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 181.192 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1H6Z _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9ETH _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1H6Z C13 C1 C 0 1 Y N N N N N 4.537 -28.296 41.992 -1.256 1.057 -0.623 C13 A1H6Z 1 A1H6Z C12 C2 C 0 1 Y N N N N N 3.371 -27.605 41.740 -2.603 1.095 -0.312 C12 A1H6Z 2 A1H6Z C8 C3 C 0 1 Y N N N N N 3.246 -30.092 42.818 -1.265 -1.266 -0.063 C8 A1H6Z 3 A1H6Z C10 C4 C 0 1 Y N N N N N 2.141 -28.217 42.054 -3.231 -0.071 0.115 C10 A1H6Z 4 A1H6Z O O1 O 0 1 N N N N Y Y 7.265 -33.283 41.990 3.885 0.799 -0.120 O A1H6Z 5 A1H6Z C7 C5 C 0 1 Y N N N N N 4.497 -29.565 42.538 -0.580 -0.149 -0.497 C7 A1H6Z 6 A1H6Z N N1 N 0 1 N N N Y Y N 4.991 -32.255 41.291 1.494 1.452 0.834 N A1H6Z 7 A1H6Z C C6 C 0 1 N N N N Y Y 7.345 -32.084 41.728 3.176 -0.149 0.119 C A1H6Z 8 A1H6Z CA C7 C 0 1 N N S N Y N 6.065 -31.292 41.515 1.714 0.059 0.421 CA A1H6Z 9 A1H6Z CB C8 C 0 1 N N N N N N 5.747 -30.393 42.715 0.887 -0.238 -0.831 CB A1H6Z 10 A1H6Z N9 N2 N 0 1 Y N N N N N 2.091 -29.454 42.590 -2.552 -1.202 0.222 N9 A1H6Z 11 A1H6Z N11 N3 N 0 1 N N N N N N 0.973 -27.588 41.837 -4.585 -0.047 0.432 N11 A1H6Z 12 A1H6Z H13 H1 H 0 1 N N N N N N 5.489 -27.842 41.761 -0.742 1.945 -0.961 H13 A1H6Z 13 A1H6Z H12 H2 H 0 1 N N N N N N 3.400 -26.614 41.311 -3.159 2.017 -0.398 H12 A1H6Z 14 A1H6Z H8 H3 H 0 1 N N N N N N 3.200 -31.082 43.248 -0.743 -2.206 0.036 H8 A1H6Z 15 A1H6Z H H4 H 0 1 N N N Y Y N 5.217 -32.831 40.505 1.768 2.093 0.105 H A1H6Z 16 A1H6Z H2 H5 H 0 1 N Y N Y Y N 4.882 -32.828 42.104 0.533 1.601 1.104 H3 A1H6Z 17 A1H6Z HA H8 H 0 1 N N N N Y N 6.184 -30.659 40.624 1.410 -0.611 1.225 HA A1H6Z 18 A1H6Z HB2 H9 H 0 1 N N N N N N 5.619 -31.030 43.602 1.118 -1.242 -1.189 HB2 A1H6Z 19 A1H6Z HB3 H10 H 0 1 N N N N N N 6.596 -29.711 42.873 1.128 0.488 -1.607 HB3 A1H6Z 20 A1H6Z H11B H11 H 0 0 N N N N N N 0.218 -28.177 42.126 -5.087 0.779 0.355 H11B A1H6Z 21 A1H6Z H11A H12 H 0 0 N N N N N N 0.951 -26.736 42.361 -5.027 -0.858 0.729 H11A A1H6Z 22 A1H6Z OXT O2 O 0 1 N Y N N Y Y ? ? ? 3.690 -1.389 0.115 O1 A1H6Z 23 A1H6Z HXT HXT H 0 1 N Y N N Y Y ? ? ? 4.632 -1.473 -0.085 H1 A1H6Z 24 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1H6Z N CA SING N N 1 A1H6Z CA CB SING N N 2 A1H6Z CB C7 SING N N 3 A1H6Z C7 C8 DOUB Y N 4 A1H6Z C8 N9 SING Y N 5 A1H6Z N9 C10 DOUB Y N 6 A1H6Z C10 N11 SING N N 7 A1H6Z C10 C12 SING Y N 8 A1H6Z C12 C13 DOUB Y N 9 A1H6Z CA C SING N N 10 A1H6Z C O DOUB N N 11 A1H6Z C13 C7 SING Y N 12 A1H6Z C13 H13 SING N N 13 A1H6Z C12 H12 SING N N 14 A1H6Z C8 H8 SING N N 15 A1H6Z N H SING N N 16 A1H6Z N H2 SING N N 17 A1H6Z CA HA SING N N 18 A1H6Z CB HB2 SING N N 19 A1H6Z CB HB3 SING N N 20 A1H6Z N11 H11B SING N N 21 A1H6Z N11 H11A SING N N 22 A1H6Z C OXT SING N N 23 A1H6Z OXT HXT SING N N 24 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1H6Z InChI InChI 1.06 "InChI=1S/C8H11N3O2/c9-6(8(12)13)3-5-1-2-7(10)11-4-5/h1-2,4,6H,3,9H2,(H2,10,11)(H,12,13)/t6-/m0/s1" A1H6Z InChIKey InChI 1.06 QYSLVOCACBAADU-LURJTMIESA-N A1H6Z SMILES_CANONICAL CACTVS 3.385 "N[C@@H](Cc1ccc(N)nc1)C(O)=O" A1H6Z SMILES CACTVS 3.385 "N[CH](Cc1ccc(N)nc1)C(O)=O" A1H6Z SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(ncc1C[C@@H](C(=O)O)N)N" A1H6Z SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(ncc1CC(C(=O)O)N)N" # _pdbx_chem_comp_identifier.comp_id A1H6Z _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S})-2-azanyl-3-(6-azanylpyridin-3-yl)propanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1H6Z "Create component" 2024-03-27 PDBE A1H6Z "Modify backbone" 2024-09-06 PDBE A1H6Z "Modify linking type" 2024-09-06 PDBE A1H6Z "Modify PCM" 2024-09-27 PDBE A1H6Z "Initial release" 2025-02-26 RCSB # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id A1H6Z _pdbx_chem_comp_pcm.modified_residue_id ? _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Non-standard residue" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom ? _pdbx_chem_comp_pcm.modified_residue_id_linking_atom ? _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #