data_A1H87 # _chem_comp.id A1H87 _chem_comp.name "2-[[(2S)-2-oxidanylpropoxy]methyl]-2-[[(2S)-2-[(2S)-2-oxidanylpropoxy]propoxy]methyl]propane-1,3-diol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H30 O7" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-04-22 _chem_comp.pdbx_modified_date 2024-10-18 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 310.384 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1H87 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9F23 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1H87 O6 O1 O 0 1 N N N N N N -117.909 -0.937 -1.794 5.463 -1.998 0.753 O6 A1H87 1 A1H87 C12 C1 C 0 1 N N S N N N -117.147 0.247 -2.053 5.796 -0.637 0.475 C12 A1H87 2 A1H87 C13 C2 C 0 1 N N N N N N -117.700 1.446 -1.320 7.214 -0.565 -0.095 C13 A1H87 3 A1H87 C11 C3 C 0 1 N N N N N N -115.829 -0.165 -1.403 4.807 -0.067 -0.543 C11 A1H87 4 A1H87 O5 O2 O 0 1 N N N N N N -116.043 -0.529 -0.044 3.500 -0.026 0.033 O5 A1H87 5 A1H87 C10 C4 C 0 1 N N N N N N -114.971 -0.173 0.823 2.496 0.493 -0.840 C10 A1H87 6 A1H87 C7 C5 C 0 1 N N N N N N -115.318 -0.588 2.250 1.144 0.491 -0.122 C7 A1H87 7 A1H87 C9 C6 C 0 1 N N N N N N -115.630 -2.082 2.181 0.782 -0.941 0.277 C9 A1H87 8 A1H87 O4 O3 O 0 1 N N N N N N -115.267 -2.787 3.349 0.701 -1.757 -0.894 O4 A1H87 9 A1H87 C8 C7 C 0 1 N N N N N N -116.571 0.181 2.681 1.231 1.363 1.131 C8 A1H87 10 A1H87 O3 O4 O 0 1 N N N N N N -116.673 1.462 2.044 1.569 2.701 0.758 O3 A1H87 11 A1H87 C6 C8 C 0 1 N N N N N N -114.209 -0.281 3.254 0.069 1.047 -1.058 C6 A1H87 12 A1H87 O2 O5 O 0 1 N N N N N N -112.989 -0.868 2.816 -1.193 1.044 -0.387 O2 A1H87 13 A1H87 C5 C9 C 0 1 N N N N N N -111.828 -0.193 3.308 -2.272 1.547 -1.178 C5 A1H87 14 A1H87 C3 C10 C 0 1 N N S N N N -111.691 -0.320 4.788 -3.567 1.497 -0.364 C3 A1H87 15 A1H87 C4 C11 C 0 1 N N N N N N -110.563 0.530 5.263 -3.371 2.252 0.953 C4 A1H87 16 A1H87 O1 O6 O 0 1 N N N N N N -111.510 -1.696 5.175 -3.903 0.136 -0.086 O1 A1H87 17 A1H87 C2 C12 C 0 1 N N N N N N -111.892 -1.943 6.540 -5.307 -0.102 0.034 C2 A1H87 18 A1H87 C C13 C 0 1 N N S N N N -111.606 -3.391 7.080 -5.549 -1.584 0.329 C A1H87 19 A1H87 C1 C14 C 0 1 N N N N N N -110.281 -3.578 7.780 -4.752 -1.994 1.569 C1 A1H87 20 A1H87 O O7 O 0 1 N N N N N N -111.582 -4.289 5.989 -5.127 -2.367 -0.789 O A1H87 21 A1H87 H1 H1 H 0 1 N N N N N N -118.784 -0.835 -2.149 5.488 -2.575 -0.023 H1 A1H87 22 A1H87 H2 H2 H 0 1 N N N N N N -117.020 0.449 -3.127 5.745 -0.055 1.396 H2 A1H87 23 A1H87 H3 H3 H 0 1 N N N N N N -117.086 2.330 -1.547 7.265 -1.146 -1.016 H3 A1H87 24 A1H87 H4 H4 H 0 1 N N N N N N -118.736 1.627 -1.642 7.469 0.474 -0.307 H4 A1H87 25 A1H87 H5 H5 H 0 1 N N N N N N -117.681 1.255 -0.237 7.919 -0.971 0.631 H5 A1H87 26 A1H87 H6 H6 H 0 1 N N N N N N -115.408 -1.024 -1.947 5.113 0.942 -0.822 H6 A1H87 27 A1H87 H7 H7 H 0 1 N N N N N N -115.124 0.678 -1.446 4.793 -0.700 -1.430 H7 A1H87 28 A1H87 H8 H8 H 0 1 N N N N N N -114.053 -0.688 0.503 2.754 1.514 -1.125 H8 A1H87 29 A1H87 H9 H9 H 0 1 N N N N N N -114.813 0.915 0.785 2.434 -0.128 -1.733 H9 A1H87 30 A1H87 H10 H10 H 0 1 N N N N N N -116.711 -2.205 2.022 1.549 -1.337 0.943 H10 A1H87 31 A1H87 H11 H11 H 0 1 N N N N N N -115.083 -2.513 1.330 -0.180 -0.943 0.789 H11 A1H87 32 A1H87 H12 H12 H 0 1 N N N N N N -115.485 -3.706 3.245 0.475 -2.680 -0.715 H12 A1H87 33 A1H87 H13 H13 H 0 1 N N N N N N -116.537 0.330 3.770 0.268 1.361 1.643 H13 A1H87 34 A1H87 H14 H14 H 0 1 N N N N N N -117.458 -0.415 2.420 1.997 0.967 1.798 H14 A1H87 35 A1H87 H15 H15 H 0 1 N N N N N N -117.462 1.901 2.340 1.641 3.311 1.505 H15 A1H87 36 A1H87 H16 H16 H 0 1 N N N N N N -114.082 0.809 3.336 0.327 2.067 -1.342 H16 A1H87 37 A1H87 H17 H17 H 0 1 N N N N N N -114.481 -0.694 4.237 0.007 0.425 -1.951 H17 A1H87 38 A1H87 H18 H18 H 0 1 N N N N N N -110.937 -0.626 2.831 -2.063 2.577 -1.465 H18 A1H87 39 A1H87 H19 H19 H 0 1 N N N N N N -111.901 0.873 3.049 -2.382 0.935 -2.073 H19 A1H87 40 A1H87 H20 H20 H 0 1 N N N N N N -112.617 0.056 5.248 -4.372 1.962 -0.933 H20 A1H87 41 A1H87 H21 H21 H 0 1 N N N N N N -110.465 0.434 6.354 -3.114 3.290 0.741 H21 A1H87 42 A1H87 H22 H22 H 0 1 N N N N N N -109.630 0.203 4.781 -4.293 2.217 1.533 H22 A1H87 43 A1H87 H23 H23 H 0 1 N N N N N N -110.761 1.581 5.004 -2.566 1.788 1.522 H23 A1H87 44 A1H87 H24 H24 H 0 1 N N N N N N -111.346 -1.232 7.177 -5.710 0.501 0.848 H24 A1H87 45 A1H87 H25 H25 H 0 1 N N N N N N -112.973 -1.758 6.627 -5.803 0.168 -0.898 H25 A1H87 46 A1H87 H26 H26 H 0 1 N N N N N N -112.415 -3.661 7.775 -6.611 -1.750 0.509 H26 A1H87 47 A1H87 H27 H27 H 0 1 N N N N N N -110.226 -2.905 8.648 -3.690 -1.828 1.389 H27 A1H87 48 A1H87 H28 H28 H 0 1 N N N N N N -110.189 -4.621 8.118 -5.074 -1.396 2.422 H28 A1H87 49 A1H87 H29 H29 H 0 1 N N N N N N -109.462 -3.345 7.083 -4.924 -3.049 1.779 H29 A1H87 50 A1H87 H30 H30 H 0 1 N N N N N N -111.410 -5.168 6.305 -5.252 -3.319 -0.672 H30 A1H87 51 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1H87 C12 O6 SING N N 1 A1H87 C12 C11 SING N N 2 A1H87 C12 C13 SING N N 3 A1H87 C11 O5 SING N N 4 A1H87 O5 C10 SING N N 5 A1H87 C10 C7 SING N N 6 A1H87 O3 C8 SING N N 7 A1H87 C9 C7 SING N N 8 A1H87 C9 O4 SING N N 9 A1H87 C7 C8 SING N N 10 A1H87 C7 C6 SING N N 11 A1H87 O2 C6 SING N N 12 A1H87 O2 C5 SING N N 13 A1H87 C5 C3 SING N N 14 A1H87 C3 O1 SING N N 15 A1H87 C3 C4 SING N N 16 A1H87 O1 C2 SING N N 17 A1H87 O C SING N N 18 A1H87 C2 C SING N N 19 A1H87 C C1 SING N N 20 A1H87 O6 H1 SING N N 21 A1H87 C12 H2 SING N N 22 A1H87 C13 H3 SING N N 23 A1H87 C13 H4 SING N N 24 A1H87 C13 H5 SING N N 25 A1H87 C11 H6 SING N N 26 A1H87 C11 H7 SING N N 27 A1H87 C10 H8 SING N N 28 A1H87 C10 H9 SING N N 29 A1H87 C9 H10 SING N N 30 A1H87 C9 H11 SING N N 31 A1H87 O4 H12 SING N N 32 A1H87 C8 H13 SING N N 33 A1H87 C8 H14 SING N N 34 A1H87 O3 H15 SING N N 35 A1H87 C6 H16 SING N N 36 A1H87 C6 H17 SING N N 37 A1H87 C5 H18 SING N N 38 A1H87 C5 H19 SING N N 39 A1H87 C3 H20 SING N N 40 A1H87 C4 H21 SING N N 41 A1H87 C4 H22 SING N N 42 A1H87 C4 H23 SING N N 43 A1H87 C2 H24 SING N N 44 A1H87 C2 H25 SING N N 45 A1H87 C H26 SING N N 46 A1H87 C1 H27 SING N N 47 A1H87 C1 H28 SING N N 48 A1H87 C1 H29 SING N N 49 A1H87 O H30 SING N N 50 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1H87 InChI InChI 1.06 "InChI=1S/C14H30O7/c1-11(17)4-19-9-14(7-15,8-16)10-20-6-13(3)21-5-12(2)18/h11-13,15-18H,4-10H2,1-3H3/t11-,12-,13-/m0/s1" A1H87 InChIKey InChI 1.06 GYGFRXYZKNFZRH-AVGNSLFASA-N A1H87 SMILES_CANONICAL CACTVS 3.385 "C[C@H](O)COCC(CO)(CO)COC[C@H](C)OC[C@H](C)O" A1H87 SMILES CACTVS 3.385 "C[CH](O)COCC(CO)(CO)COC[CH](C)OC[CH](C)O" A1H87 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H](COCC(CO)(CO)COC[C@H](C)OC[C@H](C)O)O" A1H87 SMILES "OpenEye OEToolkits" 2.0.7 "CC(COCC(CO)(CO)COCC(C)OCC(C)O)O" # _pdbx_chem_comp_identifier.comp_id A1H87 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-[[(2~{S})-2-oxidanylpropoxy]methyl]-2-[[(2~{S})-2-[(2~{S})-2-oxidanylpropoxy]propoxy]methyl]propane-1,3-diol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1H87 "Create component" 2024-04-22 PDBE A1H87 "Initial release" 2024-10-23 RCSB #