data_A1H97 # _chem_comp.id A1H97 _chem_comp.name "(5~{R})-7-pyrazin-2-yl-2-oxa-7-azaspiro[4.4]nonane" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C11 H15 N3 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-05-03 _chem_comp.pdbx_modified_date 2024-05-10 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 205.256 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1H97 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9F4M _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1H97 C10 C1 C 0 1 N N N N N N -19.578 -7.635 7.517 0.021 -1.513 -0.651 C10 A1H97 1 A1H97 C13 C2 C 0 1 Y N N N N N -17.089 -6.288 8.852 2.760 -1.066 0.340 C13 A1H97 2 A1H97 C15 C3 C 0 1 Y N N N N N -16.119 -4.890 10.506 4.298 0.580 -0.064 C15 A1H97 3 A1H97 C05 C4 C 0 1 N N R N N N -21.692 -8.145 8.437 -1.855 -0.046 -0.137 C05 A1H97 4 A1H97 C06 C5 C 0 1 N N N N N N -21.097 -7.562 7.196 -1.461 -1.254 -0.993 C06 A1H97 5 A1H97 C07 C6 C 0 1 N N N N N N -20.830 -7.661 9.589 -0.514 0.627 0.218 C07 A1H97 6 A1H97 C08 C7 C 0 1 N N N N N N -21.884 -9.640 8.438 -2.625 -0.466 1.119 C08 A1H97 7 A1H97 C09 C8 C 0 1 N N N N N N -23.099 -7.722 8.774 -2.787 0.907 -0.889 C09 A1H97 8 A1H97 C11 C9 C 0 1 N N N N N N -23.179 -9.834 7.663 -3.964 0.302 0.996 C11 A1H97 9 A1H97 C12 C10 C 0 1 Y N N N N N -18.334 -6.452 9.598 1.734 -0.132 0.224 C12 A1H97 10 A1H97 C14 C11 C 0 1 Y N N N N N -17.307 -5.034 11.263 3.283 1.509 -0.186 C14 A1H97 11 A1H97 N02 N1 N 0 1 N N N N N N -19.440 -7.252 9.000 0.410 -0.527 0.382 N02 A1H97 12 A1H97 N03 N2 N 0 1 Y N N N N N -18.361 -5.794 10.804 2.022 1.136 -0.037 N03 A1H97 13 A1H97 N04 N3 N 0 1 Y N N N N N -16.039 -5.537 9.303 4.015 -0.686 0.196 N04 A1H97 14 A1H97 O01 O1 O 0 1 N N N N N N -23.984 -8.667 8.052 -4.112 0.565 -0.417 O01 A1H97 15 A1H97 H102 H1 H 0 0 N N N N N N -19.019 -6.928 6.886 0.141 -2.525 -0.263 H102 A1H97 16 A1H97 H101 H2 H 0 0 N N N N N N -19.200 -8.654 7.349 0.636 -1.381 -1.541 H101 A1H97 17 A1H97 H131 H3 H 0 0 N N N N N N -16.993 -6.784 7.898 2.530 -2.100 0.553 H131 A1H97 18 A1H97 H151 H4 H 0 0 N N N N N N -15.300 -4.287 10.868 5.326 0.888 -0.187 H151 A1H97 19 A1H97 H061 H5 H 0 0 N N N N N N -21.350 -8.162 6.309 -1.571 -1.020 -2.052 H061 A1H97 20 A1H97 H062 H6 H 0 0 N N N N N N -21.426 -6.524 7.042 -2.069 -2.120 -0.730 H062 A1H97 21 A1H97 H072 H7 H 0 0 N N N N N N -20.702 -8.467 10.327 -0.181 1.273 -0.595 H072 A1H97 22 A1H97 H071 H8 H 0 0 N N N N N N -21.303 -6.793 10.072 -0.600 1.192 1.146 H071 A1H97 23 A1H97 H082 H9 H 0 0 N N N N N N -21.046 -10.144 7.935 -2.798 -1.542 1.121 H082 A1H97 24 A1H97 H081 H10 H 0 0 N N N N N N -21.979 -10.023 9.465 -2.089 -0.161 2.018 H081 A1H97 25 A1H97 H092 H11 H 0 0 N N N N N N -23.281 -6.691 8.436 -2.551 1.943 -0.643 H092 A1H97 26 A1H97 H091 H12 H 0 0 N N N N N N -23.270 -7.788 9.859 -2.710 0.746 -1.964 H091 A1H97 27 A1H97 H112 H13 H 0 0 N N N N N N -23.676 -10.771 7.955 -4.788 -0.314 1.356 H112 A1H97 28 A1H97 H111 H14 H 0 0 N N N N N N -22.992 -9.840 6.579 -3.918 1.237 1.555 H111 A1H97 29 A1H97 H141 H15 H 0 0 N N N N N N -17.389 -4.538 12.219 3.518 2.540 -0.402 H141 A1H97 30 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1H97 O01 C09 SING N N 1 A1H97 O01 C11 SING N N 2 A1H97 N02 C07 SING N N 3 A1H97 N02 C10 SING N N 4 A1H97 N02 C12 SING N N 5 A1H97 N03 C12 DOUB Y N 6 A1H97 N03 C14 SING Y N 7 A1H97 N04 C13 DOUB Y N 8 A1H97 N04 C15 SING Y N 9 A1H97 C05 C06 SING N N 10 A1H97 C05 C07 SING N N 11 A1H97 C05 C08 SING N N 12 A1H97 C05 C09 SING N N 13 A1H97 C06 C10 SING N N 14 A1H97 C08 C11 SING N N 15 A1H97 C12 C13 SING Y N 16 A1H97 C14 C15 DOUB Y N 17 A1H97 C10 H102 SING N N 18 A1H97 C10 H101 SING N N 19 A1H97 C13 H131 SING N N 20 A1H97 C15 H151 SING N N 21 A1H97 C06 H061 SING N N 22 A1H97 C06 H062 SING N N 23 A1H97 C07 H072 SING N N 24 A1H97 C07 H071 SING N N 25 A1H97 C08 H082 SING N N 26 A1H97 C08 H081 SING N N 27 A1H97 C09 H092 SING N N 28 A1H97 C09 H091 SING N N 29 A1H97 C11 H112 SING N N 30 A1H97 C11 H111 SING N N 31 A1H97 C14 H141 SING N N 32 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1H97 InChI InChI 1.06 "InChI=1S/C11H15N3O/c1-5-14(10-7-12-3-4-13-10)8-11(1)2-6-15-9-11/h3-4,7H,1-2,5-6,8-9H2/t11-/m1/s1" A1H97 InChIKey InChI 1.06 ITTBXBSSJHVWJS-LLVKDONJSA-N A1H97 SMILES_CANONICAL CACTVS 3.385 "C1C[C@@]2(CCN(C2)c3cnccn3)CO1" A1H97 SMILES CACTVS 3.385 "C1C[C]2(CCN(C2)c3cnccn3)CO1" A1H97 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cnc(cn1)N2CC[C@]3(C2)CCOC3" A1H97 SMILES "OpenEye OEToolkits" 2.0.7 "c1cnc(cn1)N2CCC3(C2)CCOC3" # _pdbx_chem_comp_identifier.comp_id A1H97 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(5~{R})-7-pyrazin-2-yl-2-oxa-7-azaspiro[4.4]nonane" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1H97 "Create component" 2024-05-03 PDBE A1H97 "Initial release" 2024-05-15 RCSB #